BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23k15
(609 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58334-1|AAC50557.1| 1005|Homo sapiens Bbp/53BP2 protein. 34 0.34
U09582-1|AAA21597.1| 529|Homo sapiens p53-binding protein protein. 34 0.34
BC058918-1|AAH58918.1| 1127|Homo sapiens tumor protein p53 bindi... 34 0.34
BC040247-1|AAH40247.1| 1048|Homo sapiens TP53BP2 protein protein. 34 0.34
AJ318888-1|CAC83012.1| 1128|Homo sapiens ASPP2 protein protein. 34 0.34
X57436-1|CAA40684.1| 440|Homo sapiens oligodentrocyte-myelin gl... 31 3.2
X51694-1|CAA35991.1| 433|Homo sapiens oligodendrocyte-myelin gl... 31 3.2
M63623-1|AAA59970.1| 440|Homo sapiens oligodendrocyte-myelin gl... 31 3.2
BC018050-1|AAH18050.1| 440|Homo sapiens oligodendrocyte myelin ... 31 3.2
AK222663-1|BAD96383.1| 440|Homo sapiens oligodendrocyte myelin ... 31 3.2
AF147791-1|AAD55679.1| 957|Homo sapiens mucin 11 protein. 30 7.3
BC064483-1|AAH64483.1| 525|Homo sapiens chromosome 17 open read... 29 9.7
AL832011-1|CAD91146.1| 1074|Homo sapiens hypothetical protein pr... 29 9.7
AK128728-1|BAC87593.1| 441|Homo sapiens EC 2.4.99.1). protein. 29 9.7
AK127221-1|BAC86888.1| 441|Homo sapiens protein ( Homo sapiens ... 29 9.7
AK097452-1|BAC05058.1| 225|Homo sapiens protein ( Homo sapiens ... 29 9.7
AK056090-1|BAB71091.1| 525|Homo sapiens protein ( Homo sapiens ... 29 9.7
>U58334-1|AAC50557.1| 1005|Homo sapiens Bbp/53BP2 protein.
Length = 1005
Score = 34.3 bits (75), Expect = 0.34
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 299 SSADNQQRN-EEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNP 472
++A NQQ++ E + ++ E E P S + N NE++P+P+S + +SNP
Sbjct: 528 AAAQNQQQHPENIYSNSQGKPGSPEPETEPVSSVQENHENERIPRPLSPTKLLPFLSNP 586
>U09582-1|AAA21597.1| 529|Homo sapiens p53-binding protein protein.
Length = 529
Score = 34.3 bits (75), Expect = 0.34
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 299 SSADNQQRN-EEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNP 472
++A NQQ++ E + ++ E E P S + N NE++P+P+S + +SNP
Sbjct: 52 AAAQNQQQHPENIYSNSQGKPGSPEPETEPVSSVQENHENERIPRPLSPTKLLPFLSNP 110
>BC058918-1|AAH58918.1| 1127|Homo sapiens tumor protein p53 binding
protein, 2 protein.
Length = 1127
Score = 34.3 bits (75), Expect = 0.34
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 299 SSADNQQRN-EEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNP 472
++A NQQ++ E + ++ E E P S + N NE++P+P+S + +SNP
Sbjct: 650 AAAQNQQQHPENIYSNSQGKPGSPEPETEPVSSVQENHENERIPRPLSPTKLLPFLSNP 708
>BC040247-1|AAH40247.1| 1048|Homo sapiens TP53BP2 protein protein.
Length = 1048
Score = 34.3 bits (75), Expect = 0.34
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 299 SSADNQQRN-EEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNP 472
++A NQQ++ E + ++ E E P S + N NE++P+P+S + +SNP
Sbjct: 571 AAAQNQQQHPENIYSNSQGKPGSPEPETEPVSSVQENHENERIPRPLSPTKLLPFLSNP 629
>AJ318888-1|CAC83012.1| 1128|Homo sapiens ASPP2 protein protein.
Length = 1128
Score = 34.3 bits (75), Expect = 0.34
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 299 SSADNQQRN-EEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNP 472
++A NQQ++ E + ++ E E P S + N NE++P+P+S + +SNP
Sbjct: 651 AAAQNQQQHPENIYSNSQGKPGSPEPETEPVSSVQENHENERIPRPLSPTKLLPFLSNP 709
>X57436-1|CAA40684.1| 440|Homo sapiens oligodentrocyte-myelin
glycoprotein protein.
Length = 440
Score = 31.1 bits (67), Expect = 3.2
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 459 QSQIQHLMLTYNHSQNLHQHILQCLKNIKPLPDSSSSIEN 578
Q I HL L+YNH +LH + Q N++ L S++ +E+
Sbjct: 54 QENIIHLNLSYNHFTDLHNQLTQ-YTNLRTLDISNNRLES 92
>X51694-1|CAA35991.1| 433|Homo sapiens oligodendrocyte-myelin
glycoprotein protein.
Length = 433
Score = 31.1 bits (67), Expect = 3.2
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 459 QSQIQHLMLTYNHSQNLHQHILQCLKNIKPLPDSSSSIEN 578
Q I HL L+YNH +LH + Q N++ L S++ +E+
Sbjct: 47 QENIIHLNLSYNHFTDLHNQLTQ-YTNLRTLDISNNRLES 85
>M63623-1|AAA59970.1| 440|Homo sapiens oligodendrocyte-myelin
glycoprotein protein.
Length = 440
Score = 31.1 bits (67), Expect = 3.2
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 459 QSQIQHLMLTYNHSQNLHQHILQCLKNIKPLPDSSSSIEN 578
Q I HL L+YNH +LH + Q N++ L S++ +E+
Sbjct: 54 QENIIHLNLSYNHFTDLHNQLTQ-YTNLRTLDISNNRLES 92
>BC018050-1|AAH18050.1| 440|Homo sapiens oligodendrocyte myelin
glycoprotein protein.
Length = 440
Score = 31.1 bits (67), Expect = 3.2
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 459 QSQIQHLMLTYNHSQNLHQHILQCLKNIKPLPDSSSSIEN 578
Q I HL L+YNH +LH + Q N++ L S++ +E+
Sbjct: 54 QENIIHLNLSYNHFTDLHNQLTQ-YTNLRTLDISNNRLES 92
>AK222663-1|BAD96383.1| 440|Homo sapiens oligodendrocyte myelin
glycoprotein variant protein.
Length = 440
Score = 31.1 bits (67), Expect = 3.2
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 459 QSQIQHLMLTYNHSQNLHQHILQCLKNIKPLPDSSSSIEN 578
Q I HL L+YNH +LH + Q N++ L S++ +E+
Sbjct: 54 QENIIHLNLSYNHFTDLHNQLTQ-YTNLRTLDISNNRLES 92
>AF147791-1|AAD55679.1| 957|Homo sapiens mucin 11 protein.
Length = 957
Score = 29.9 bits (64), Expect = 7.3
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = +2
Query: 263 SSLGAILDTAFTSSADNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSS 442
SS G+ T F S+ R+EE ++ + VLP S +L E P+SS
Sbjct: 245 SSPGSTATTHFPDSSTTSGRSEESTASHSNQDATGTI-VLPARSTTSVLLGESTTSPISS 303
Query: 443 NYVNST 460
+ +T
Sbjct: 304 GSMETT 309
>BC064483-1|AAH64483.1| 525|Homo sapiens chromosome 17 open reading
frame 56 protein.
Length = 525
Score = 29.5 bits (63), Expect = 9.7
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 2/81 (2%)
Frame = +2
Query: 296 TSSADNQQRNEEMECDALFAESDDEVEVLPTSDIA--SNILNEQVPKPVSSNYVNSTISN 469
T+ A R+ E C L E PT+ + S++L + VP P S ++ S
Sbjct: 338 TNKATKILRHFEASCGQLSPARGTSAEPGPTAALPGPSDLLTDAVPLPGSQVFLQPLSST 397
Query: 470 PTFDVNLQPLSEPSSAHTPVP 532
P + P S S+ P P
Sbjct: 398 PVSSRSPAPSSGMPSSPVPTP 418
>AL832011-1|CAD91146.1| 1074|Homo sapiens hypothetical protein
protein.
Length = 1074
Score = 29.5 bits (63), Expect = 9.7
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Frame = +2
Query: 416 EQVP----KPVSSNYVNSTISNPTFDVNLQPLSEPSSAHTPVPE-EYQTFT 553
EQ+P KP+S N+ TI PT D L +H E + QTFT
Sbjct: 219 EQLPLPQSKPISPNFKVKTIKLPTLDHTLNETDHSYESHKQQSEIDVQTFT 269
>AK128728-1|BAC87593.1| 441|Homo sapiens EC 2.4.99.1). protein.
Length = 441
Score = 29.5 bits (63), Expect = 9.7
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 2/81 (2%)
Frame = +2
Query: 296 TSSADNQQRNEEMECDALFAESDDEVEVLPTSDIA--SNILNEQVPKPVSSNYVNSTISN 469
T+ A R+ E C L E PT+ + S++L + VP P S ++ S
Sbjct: 254 TNKATKILRHFEASCGQLSPARGTSAEPGPTAALPGPSDLLTDAVPLPGSQVFLQPLSST 313
Query: 470 PTFDVNLQPLSEPSSAHTPVP 532
P + P S S+ P P
Sbjct: 314 PVSSRSPAPSSGMPSSPVPTP 334
>AK127221-1|BAC86888.1| 441|Homo sapiens protein ( Homo sapiens
cDNA FLJ45288 fis, clone BRHIP3002141. ).
Length = 441
Score = 29.5 bits (63), Expect = 9.7
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 2/81 (2%)
Frame = +2
Query: 296 TSSADNQQRNEEMECDALFAESDDEVEVLPTSDIA--SNILNEQVPKPVSSNYVNSTISN 469
T+ A R+ E C L E PT+ + S++L + VP P S ++ S
Sbjct: 254 TNKATKILRHFEASCGQLSPARGTSAEPGPTAALPGPSDLLTDAVPLPGSQVFLQPLSST 313
Query: 470 PTFDVNLQPLSEPSSAHTPVP 532
P + P S S+ P P
Sbjct: 314 PVSSRSPAPSSGMPSSPVPTP 334
>AK097452-1|BAC05058.1| 225|Homo sapiens protein ( Homo sapiens
cDNA FLJ40133 fis, clone TESTI2012231. ).
Length = 225
Score = 29.5 bits (63), Expect = 9.7
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -2
Query: 404 LMQYQMWVAPPLHHHSQQTKHHTPFLHFSVDCQH 303
L+ +Q + P HH + HTPF + C H
Sbjct: 96 LLIHQSYTHTPTHHTQHKPHMHTPFTSINTPCIH 129
>AK056090-1|BAB71091.1| 525|Homo sapiens protein ( Homo sapiens
cDNA FLJ31528 fis, clone NT2RI2000412. ).
Length = 525
Score = 29.5 bits (63), Expect = 9.7
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 2/81 (2%)
Frame = +2
Query: 296 TSSADNQQRNEEMECDALFAESDDEVEVLPTSDIA--SNILNEQVPKPVSSNYVNSTISN 469
T+ A R+ E C L E PT+ + S++L + VP P S ++ S
Sbjct: 338 TNKATKILRHFEASCGQLSPARGTSAEPGPTAALPGPSDLLTDAVPLPGSQVFLQPLSST 397
Query: 470 PTFDVNLQPLSEPSSAHTPVP 532
P + P S S+ P P
Sbjct: 398 PVSSRSPAPSSGMPSSPVPTP 418
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,454,319
Number of Sequences: 237096
Number of extensions: 1823631
Number of successful extensions: 4522
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4520
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -