Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23k15
(609 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U82968-1|AAB40927.1| 281|Caenorhabditis elegans MAD-like-1 homo... 31 0.64
U40947-2|AAC48067.1| 281|Caenorhabditis elegans Mad-like protei... 31 0.64
AL117193-1|CAB54981.1| 767|Caenorhabditis elegans Hypothetical ... 31 0.85
AC024825-1|ABA00169.1| 1908|Caenorhabditis elegans Plexin protei... 31 0.85
AB080022-1|BAB85224.1| 1951|Caenorhabditis elegans plexin A prot... 31 0.85
AC026301-2|AAK68896.2| 320|Caenorhabditis elegans Hypothetical ... 30 1.5
U23449-3|AAC24301.1| 579|Caenorhabditis elegans Nuclear hormone... 29 2.6
AC084152-2|AAM69073.2| 1571|Caenorhabditis elegans Hypothetical ... 29 2.6
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr... 29 3.4
U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z75546-8|CAC42331.2| 640|Caenorhabditis elegans Hypothetical pr... 28 6.0
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 28 6.0
AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical ... 28 6.0
Z92834-1|CAB07382.1| 564|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical pr... 27 7.9
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 27 7.9
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 27 7.9
U23521-2|AAC46815.2| 316|Caenorhabditis elegans Hypothetical pr... 27 7.9
U23521-1|ABD63220.1| 348|Caenorhabditis elegans Hypothetical pr... 27 7.9
AF025450-4|AAO38668.1| 373|Caenorhabditis elegans Hypothetical ... 27 7.9
>U82968-1|AAB40927.1| 281|Caenorhabditis elegans MAD-like-1 homolog
protein.
Length = 281
Score = 31.1 bits (67), Expect = 0.64
Identities = 17/72 (23%), Positives = 35/72 (48%)
Frame = +2
Query: 311 NQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNL 490
N R+E+ E A A+ + EV + A L++ P+ +S++ +++ + +
Sbjct: 159 NDLRDEQDELVAELAQLQADEEVAQATSQACQTLSQSRPESRASSFTSTSSRDSPCYLEY 218
Query: 491 QPLSEPSSAHTP 526
P S+P +H P
Sbjct: 219 SPSSKPMDSHKP 230
>U40947-2|AAC48067.1| 281|Caenorhabditis elegans Mad-like protein 1
protein.
Length = 281
Score = 31.1 bits (67), Expect = 0.64
Identities = 17/72 (23%), Positives = 35/72 (48%)
Frame = +2
Query: 311 NQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNL 490
N R+E+ E A A+ + EV + A L++ P+ +S++ +++ + +
Sbjct: 159 NDLRDEQDELVAELAQLQADEEVAQATSQACQTLSQSRPESRASSFTSTSSRDSPCYLEY 218
Query: 491 QPLSEPSSAHTP 526
P S+P +H P
Sbjct: 219 SPSSKPMDSHKP 230
>AL117193-1|CAB54981.1| 767|Caenorhabditis elegans Hypothetical
protein Y105C5A.1 protein.
Length = 767
Score = 30.7 bits (66), Expect = 0.85
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 311 NQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSN 445
N+ R + + SDDE+EV+P + ++ EQ PK + N
Sbjct: 26 NRTRPAPTPIEYITLSSDDEIEVIPPPPKRAKMMEEQKPKDLLEN 70
>AC024825-1|ABA00169.1| 1908|Caenorhabditis elegans Plexin protein 1
protein.
Length = 1908
Score = 30.7 bits (66), Expect = 0.85
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +2
Query: 86 CMFKYSPITNEMVNQPFLTQTVRVS*IIKVQYGITLL-KRMTEKGFEGEQSTSSWDVPGP 262
C FKY +T+E + T+ ++ YG +LL T GF S + + V G
Sbjct: 746 CEFKYGTVTHEKIAMRTSDDTITCDEMLFEPYGTSLLGSGSTPYGFNVIWSATGFAV-GK 804
Query: 263 SSLGAILDTAFTSSAD 310
S+ +LD + + D
Sbjct: 805 KSINRVLDNVASLAID 820
>AB080022-1|BAB85224.1| 1951|Caenorhabditis elegans plexin A
protein.
Length = 1951
Score = 30.7 bits (66), Expect = 0.85
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +2
Query: 86 CMFKYSPITNEMVNQPFLTQTVRVS*IIKVQYGITLL-KRMTEKGFEGEQSTSSWDVPGP 262
C FKY +T+E + T+ ++ YG +LL T GF S + + V G
Sbjct: 752 CEFKYGTVTHEKIAMRTSDDTITCDEMLFEPYGTSLLGSGSTPYGFNVIWSATGFAV-GK 810
Query: 263 SSLGAILDTAFTSSAD 310
S+ +LD + + D
Sbjct: 811 KSINRVLDNVASLAID 826
>AC026301-2|AAK68896.2| 320|Caenorhabditis elegans Hypothetical
protein Y54F10BM.5 protein.
Length = 320
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -3
Query: 181 ILHFNNSGNSDCLRQKRLINHFIGYGRILKHT*LFLT*IFKKNKYEISLFNFVI 20
I FN DCL Q R F + LK + + +F NK++I L NF I
Sbjct: 193 IKEFNQLERLDCLDQWRSAKTFQSWHLPLKEAEIKIEQLFHFNKFKIKLENFSI 246
>U23449-3|AAC24301.1| 579|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 22 protein.
Length = 579
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 383 PTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQP 496
P +D+ N + P P S + +S S+P++D+ QP
Sbjct: 12 PPTDLFKNTFEDVPPSPESLDVGDSLGSSPSYDLGFQP 49
>AC084152-2|AAM69073.2| 1571|Caenorhabditis elegans Hypothetical
protein Y102A11A.3 protein.
Length = 1571
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +2
Query: 344 ALFAESDDEVE--VLPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQPLSEPSSA 517
A+ +SD+ + LPT + S + + P FD +LQ + EPSSA
Sbjct: 311 AVLEKSDENISWVQLPTFQLPSLFSKQPILPPNVKMESEKQEDEANFDYSLQSVPEPSSA 370
Query: 518 HTP 526
+ P
Sbjct: 371 YLP 373
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 3.4
Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Frame = +2
Query: 287 TAFTSSADNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTIS 466
TA ++ N+++ + C A+ A + S L P S+ ST +
Sbjct: 622 TASSALNKNKEKEKSPPCFAVTAAEAKGAAAVAKSKSRKKSLKNTPSVPTSTITTTSTTT 681
Query: 467 N-PTFDVNLQPLSEPSSAHTPVP 532
N PT Q S S+ H+P P
Sbjct: 682 NKPTSTSTKQTTSSSSTEHSPSP 704
>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical protein
K03H1.5 protein.
Length = 1385
Score = 28.7 bits (61), Expect = 3.4
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +2
Query: 308 DNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVN 487
+ R ++E + +F S ++ ++ T D SN Q +P+ S +S S P F
Sbjct: 1287 EQSDRLNKLENERIFGTSPEKTPLIET-DFRSNFNMNQPSRPIPSQPPSSQYSPPVFAAP 1345
Query: 488 LQPLSEPSSAHT 523
P S+P+ T
Sbjct: 1346 -PPPSQPTRLPT 1356
>U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical protein
C52E12.4 protein.
Length = 1487
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 83 LCMFKYSPITNEMVNQP-FLTQTVRVS*IIKVQYGIT 190
L + +YSP+T +M N+P FL ++ + K+ Y ++
Sbjct: 1436 LPLMRYSPVTADMYNEPSFLRTPAHMTYLAKLMYSLS 1472
>Z75546-8|CAC42331.2| 640|Caenorhabditis elegans Hypothetical
protein R05D11.9 protein.
Length = 640
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 350 FAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDV 484
F++ DD V + +I+SNI++ P+S ++ NP D+
Sbjct: 11 FSQMDDVVSIC--REISSNIISTDKNVPISKMIIHKIFKNPHIDL 53
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 27.9 bits (59), Expect = 6.0
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +2
Query: 320 RNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPTF---DVNL 490
R+E E ++E++ + A +I +Q P V S+ +S +S+PT+ + L
Sbjct: 1065 RDELAEKQKAIDAQEEEIQTKWAALQARSIEQQQSPMHVRSSSSHSQVSSPTYKTPQIQL 1124
Query: 491 QPLSEPSSA 517
P S SS+
Sbjct: 1125 PPSSSASSS 1133
>AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical
protein R10F2.6 protein.
Length = 1150
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -2
Query: 119 FHWLWENT*TYIAIFNMNFQEKQIRNKFVQFCYCEQ 12
+HWL+EN Y+ + N F E + F +C +
Sbjct: 757 WHWLFENDVKYVVMLN-QFLESEFSEMFRLLSFCSE 791
>Z92834-1|CAB07382.1| 564|Caenorhabditis elegans Hypothetical
protein F39B2.1 protein.
Length = 564
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 380 APPLHHHSQQTKHHTPFLHFSVDCQ 306
APP HHH LH+ +D Q
Sbjct: 46 APPHHHHHHHQHQPQQHLHYMIDSQ 70
>Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical protein
C38D4.3 protein.
Length = 1784
Score = 27.5 bits (58), Expect = 7.9
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = +2
Query: 356 ESDDEVEVLPTSDIASNI--LNEQV--PKPVSSNYVNSTISNPTFDVNLQPLSEPSSAHT 523
+ D++ E +PT D+A ++ +E+V + V S V P Q EP
Sbjct: 1242 QMDEDCEAVPTIDVADDLESKSEEVNEEEVVESEEVQQDAKEPEKTEKRQEEPEPEVMQP 1301
Query: 524 PVPEEYQ 544
+PEE Q
Sbjct: 1302 VIPEEPQ 1308
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 401 SNILNEQVPKPVSSNYVNSTISNPTFDVNLQPLSEPSSAHTPVPEE 538
S + ++ P P S + V I T + EP +H+PVP E
Sbjct: 4726 SQVQRDESPAP-SEDSVKHVIEKTTTTTVTEERYEPEDSHSPVPSE 4770
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 401 SNILNEQVPKPVSSNYVNSTISNPTFDVNLQPLSEPSSAHTPVPEE 538
S + ++ P P S + V I T + EP +H+PVP E
Sbjct: 4726 SQVQRDESPAP-SEDSVKHVIEKTTTTTVTEERYEPEDSHSPVPSE 4770
>U23521-2|AAC46815.2| 316|Caenorhabditis elegans Hypothetical
protein F41C3.8a protein.
Length = 316
Score = 27.5 bits (58), Expect = 7.9
Identities = 24/90 (26%), Positives = 37/90 (41%)
Frame = +2
Query: 269 LGAILDTAFTSSADNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNY 448
+GA + T S Q+ +M S E +LP+S ++ + N P P S
Sbjct: 1 MGAFGEMRHTPSPGTQKLRVDMSSSGSTPVSKVETPILPSSSMSQHPPNN--PFPRGSQS 58
Query: 449 VNSTISNPTFDVNLQPLSEPSSAHTPVPEE 538
NS+ S P VN S +S +P +
Sbjct: 59 YNSSGSTP-LRVNTSNRSSANSQRPLLPPQ 87
>U23521-1|ABD63220.1| 348|Caenorhabditis elegans Hypothetical
protein F41C3.8b protein.
Length = 348
Score = 27.5 bits (58), Expect = 7.9
Identities = 24/90 (26%), Positives = 37/90 (41%)
Frame = +2
Query: 269 LGAILDTAFTSSADNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNY 448
+GA + T S Q+ +M S E +LP+S ++ + N P P S
Sbjct: 33 MGAFGEMRHTPSPGTQKLRVDMSSSGSTPVSKVETPILPSSSMSQHPPNN--PFPRGSQS 90
Query: 449 VNSTISNPTFDVNLQPLSEPSSAHTPVPEE 538
NS+ S P VN S +S +P +
Sbjct: 91 YNSSGSTP-LRVNTSNRSSANSQRPLLPPQ 119
>AF025450-4|AAO38668.1| 373|Caenorhabditis elegans Hypothetical
protein C41H7.3 protein.
Length = 373
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +3
Query: 282 WILPSHLVLTINREMKKWSVMLCLLRVMMKWRCYPHLILHQIYL 413
W+ + + I R+M K L L + KW YPH I ++ YL
Sbjct: 107 WLRRNLQLYIIQRKMDK----LTLDAELAKWELYPHFIYYRQYL 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,015,644
Number of Sequences: 27780
Number of extensions: 300065
Number of successful extensions: 1044
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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