Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23k13
         (331 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE006464-6|AAK61238.1|  266|Homo sapiens unknown protein.              58   5e-09
BC007207-1|AAH07207.1|  107|Homo sapiens hypothetical protein MG...    46   3e-05
AB065510-1|BAC05758.1|  312|Homo sapiens seven transmembrane hel...    31   1.1  
AB065679-1|BAC45260.1|  919|Homo sapiens seven transmembrane hel...    30   2.0  

>AE006464-6|AAK61238.1|  266|Homo sapiens unknown protein.
          Length = 266

 Score = 58.4 bits (135), Expect = 5e-09
 Identities = 28/55 (50%), Positives = 35/55 (63%)
 Frame = +2

Query: 2   PDSNVQFNASLKSRNPAWGLRDISELIKIAADYSLTLIDTVEMPANNKTLIWKKN 166
           P SNV F+  L+ RNP WGLRD + L  +     L L   V+MPANNK LI++KN
Sbjct: 212 PQSNVDFDLMLRCRNPEWGLRDTALLEDLGKASGLLLERMVDMPANNKCLIFRKN 266


>BC007207-1|AAH07207.1|  107|Homo sapiens hypothetical protein
           MGC13114 protein.
          Length = 107

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 22/42 (52%), Positives = 27/42 (64%)
 Frame = +2

Query: 41  RNPAWGLRDISELIKIAADYSLTLIDTVEMPANNKTLIWKKN 166
           RNP WGLRD + L  +     L L   V+MPANNK LI++KN
Sbjct: 66  RNPEWGLRDTALLEDLGKASGLLLERMVDMPANNKCLIFRKN 107


>AB065510-1|BAC05758.1|  312|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 312

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 255 GLFIVFCSLLFVLQIHFFTCNIHSTFYCN 169
           G  IVFC  + ++Q+ F   N+ S FYC+
Sbjct: 150 GFTIVFCQTMLLIQLPFCGNNVISHFYCD 178


>AB065679-1|BAC45260.1|  919|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 919

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = -2

Query: 303 MDDLTINHRSL*Y-S*SGLFIVFCSLLFVLQIHFFTCNIHSTFYCNQFFFHIKVLLFAGI 127
           +DD + N+ SL + S S L I F S   +   HFF  +I   F+C      +   +F+ I
Sbjct: 704 IDDQSNNYCSLHFWSSSCLLISFESQKTLNVFHFFVLHISVLFFCQSLLLEVHWYVFSII 763

Query: 126 STVSMS 109
              S+S
Sbjct: 764 KCPSLS 769


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,105,275
Number of Sequences: 237096
Number of extensions: 581778
Number of successful extensions: 952
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1743854340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)