Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23k13
         (331 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023830-3|CAE17985.1|  204|Caenorhabditis elegans Hypothetical ...    46   8e-06
AF047662-5|AAC04440.1|  385|Caenorhabditis elegans Hypothetical ...    27   2.4  
Z70781-2|CAA94832.1|  396|Caenorhabditis elegans Hypothetical pr...    26   5.5  
AL023837-1|CAA19499.1|  718|Caenorhabditis elegans Hypothetical ...    26   5.5  
AF016661-1|AAB66049.2|  514|Caenorhabditis elegans Hypothetical ...    26   7.3  
Z72502-1|CAA96585.2|  430|Caenorhabditis elegans Hypothetical pr...    25   9.7  
AL032627-22|CAD56607.2|   89|Caenorhabditis elegans Hypothetical...    25   9.7  

>AL023830-3|CAE17985.1|  204|Caenorhabditis elegans Hypothetical
           protein Y26E6A.3 protein.
          Length = 204

 Score = 45.6 bits (103), Expect = 8e-06
 Identities = 20/54 (37%), Positives = 34/54 (62%)
 Frame = +2

Query: 2   PDSNVQFNASLKSRNPAWGLRDISELIKIAADYSLTLIDTVEMPANNKTLIWKK 163
           P SN+ F+ +LK+ +P  GL+DI  L ++A   +L L + + +P NN  LI+ +
Sbjct: 151 PQSNIAFHTNLKAEDPEHGLKDIKYLERLANSSNLRLAEKITVPKNNFILIFSR 204


>AF047662-5|AAC04440.1|  385|Caenorhabditis elegans Hypothetical
           protein T22B2.3 protein.
          Length = 385

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -2

Query: 252 LFIVFCSLLFVLQIHFFTCNIHSTFYCNQFFF 157
           L  VFC +LF +Q  FF    H  F C    F
Sbjct: 294 LLSVFCLILFSMQTLFFPNQNHEFFLCRVGIF 325


>Z70781-2|CAA94832.1|  396|Caenorhabditis elegans Hypothetical
           protein F57A8.4 protein.
          Length = 396

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -2

Query: 252 LFIVFCSLLFVLQIHFFTCNIHSTFYCNQFFFHI 151
           L  V   L+ +L I FFT +  + ++ N+F +HI
Sbjct: 70  LLAVLDLLMDLLYIPFFTVDALAIYHKNEFLYHI 103


>AL023837-1|CAA19499.1|  718|Caenorhabditis elegans Hypothetical
           protein Y37H2C.1 protein.
          Length = 718

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -2

Query: 255 GLFIVFCSLLFVLQIHFFTCNIHSTFYCNQFFFH 154
           G+F+V  SL  +++I F  C+I  T Y    +F+
Sbjct: 499 GMFVVDSSLRLIIKIVFSICSIGFTGYFAYKYFY 532


>AF016661-1|AAB66049.2|  514|Caenorhabditis elegans Hypothetical
           protein F02E11.2 protein.
          Length = 514

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = -2

Query: 258 SGLFIVFCSLLFVLQIHFFTCNIHSTFYCNQFFFHIKVLLF 136
           S L ++FC LL V     F     S F+C+ F  H  VLLF
Sbjct: 214 SQLLLLFC-LLCVFPPRTFMPTSCSRFWCSFFTTHKFVLLF 253


>Z72502-1|CAA96585.2|  430|Caenorhabditis elegans Hypothetical
           protein C08B6.2 protein.
          Length = 430

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
 Frame = -3

Query: 254 DSS*YFALCCLCF----KYIFSLVIFILLFT 174
           D   +F L   CF    KY F  +IF+LLF+
Sbjct: 383 DQENFFVLHLFCFYHNIKYFFYYIIFMLLFS 413


>AL032627-22|CAD56607.2|   89|Caenorhabditis elegans Hypothetical
           protein Y41C4A.17 protein.
          Length = 89

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
 Frame = -2

Query: 210 HFFTCNIHSTFY----CNQFFFHIKVLLFAG 130
           H F  N+ S  +    C QFFF I VL + G
Sbjct: 27  HAFPQNLQSRLFDYLCCGQFFFRILVLYYFG 57


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,319,116
Number of Sequences: 27780
Number of extensions: 103768
Number of successful extensions: 305
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 305
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)