Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23k10
         (582 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0162 + 15245354-15245458,15245558-15245629,15245793-152466...    28   4.7  
12_02_0127 + 13961726-13961947,13962050-13962121,13962288-139630...    28   6.2  
09_02_0108 - 4358051-4358645,4358722-4359137,4360307-4360903,436...    27   8.2  
07_01_1211 - 11546407-11546466,11546550-11546618,11546777-115468...    27   8.2  

>09_04_0162 +
           15245354-15245458,15245558-15245629,15245793-15246617,
           15247787-15248474,15248805-15248821
          Length = 568

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = +2

Query: 455 ENPDENYRVRVVNIVYFLEDDSMTVME 535
           ENPD+N+    +NI  FLE++S+T ++
Sbjct: 200 ENPDQNFSEEDINI--FLENESVTAVQ 224


>12_02_0127 +
           13961726-13961947,13962050-13962121,13962288-13963058,
           13963401-13963573,13963973-13964083,13964114-13964460,
           13964627-13964652
          Length = 573

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = +2

Query: 455 ENPDENYRVRVVNIVYFLEDDSMTVME 535
           ENPD+N+    +NI  FLE++S+ V++
Sbjct: 239 ENPDQNFSEEDINI--FLENESVAVVQ 263


>09_02_0108 -
           4358051-4358645,4358722-4359137,4360307-4360903,
           4361068-4361139,4361236-4361370,4361485-4361585,
           4362719-4362863
          Length = 686

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/27 (40%), Positives = 20/27 (74%)
 Frame = +2

Query: 455 ENPDENYRVRVVNIVYFLEDDSMTVME 535
           ENPD+N+    +NI  F+E++S+T ++
Sbjct: 292 ENPDQNFSEEDINI--FMENESVTAVQ 316


>07_01_1211 -
           11546407-11546466,11546550-11546618,11546777-11546865,
           11547046-11547142,11547238-11547391,11548295-11548409,
           11549182-11549250,11549996-11550110
          Length = 255

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = -3

Query: 331 VDRIIGQGKRIAVNISWCSTGPSNNGVRESVALIIS*RASQMILRPGWIRK 179
           + R+     R+ V     + G +NN + E +  ++  R SQM L+ GW  K
Sbjct: 182 ITRVNADDVRVTVAAP-AARGEANNELLEFMGKVLGLRLSQMTLQRGWNNK 231


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,616,668
Number of Sequences: 37544
Number of extensions: 351873
Number of successful extensions: 807
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)