Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23k03
(697 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1076 + 23779941-23779988,23780102-23780191,23781580-237816... 246 1e-65
01_01_1178 + 9385261-9385374,9385457-9385620,9386251-9386453,938... 142 2e-34
12_01_0038 - 312152-312748,312930-313362,313572-314440,314535-31... 124 5e-29
11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-29... 124 9e-29
03_02_0665 - 10268959-10269148,10269344-10269936,10270572-102710... 120 8e-28
07_03_1774 + 29425486-29425831,29426018-29426235,29426337-294271... 119 3e-27
02_04_0046 + 19211961-19212231,19212651-19212706,19212947-192130... 71 1e-12
02_05_1131 - 34328168-34328557,34328838-34328957,34329067-343291... 56 4e-08
11_04_0388 + 17076157-17076254,17076762-17076813,17077672-170778... 48 9e-06
06_01_1006 + 7836366-7836460,7836568-7836626,7836877-7836961,783... 44 9e-05
03_06_0476 + 34199577-34199638,34200267-34200397,34200535-342006... 34 0.094
09_02_0099 + 4265550-4265663,4266794-4267024,4267619-4267681,426... 32 0.50
01_05_0699 - 24376987-24377154,24377259-24377406,24377530-243776... 28 0.84
09_02_0121 + 4502628-4502696,4503727-4503829,4504205-4504328,450... 31 1.2
08_02_0781 - 21157715-21157783,21158869-21159087,21161181-211613... 31 1.2
05_05_0278 - 23786507-23786875,23787191-23787315,23787499-237876... 30 1.5
03_01_0525 + 3952095-3952217,3953131-3953614,3953695-3953750,395... 30 1.5
05_05_0006 + 21450739-21451434 30 2.0
01_07_0205 - 41978437-41980599,41980805-41981215 30 2.0
09_02_0501 - 9955987-9956244,9956329-9956583,9956713-9956884,995... 29 3.5
05_03_0289 - 11688733-11691342 29 3.5
05_01_0078 - 523366-525196,525622-525675,527135-529341 29 4.7
01_06_0356 + 28662956-28664043,28664255-28665139,28665227-286658... 29 4.7
08_02_0417 - 16904476-16904662,16904846-16905029,16905150-169058... 28 8.1
04_03_0399 - 15414405-15416717,15416739-15417524,15417776-15417784 28 8.1
04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093 28 8.1
>07_03_1076 +
23779941-23779988,23780102-23780191,23781580-23781663,
23781792-23782010,23782873-23782974,23783809-23784207,
23784332-23784561,23784749-23784842,23784931-23785113,
23785254-23785351,23785831-23786143
Length = 619
Score = 246 bits (603), Expect = 1e-65
Identities = 110/178 (61%), Positives = 140/178 (78%)
Frame = +3
Query: 138 EAIANSKLLVVGAGGIGCEILKNLVLTGFPYIEIIDLDTIDVSNLNRQFLFHKEHVGKSK 317
EA+ +K+L+VGAGGIGCE+LK L L+GF I IIDLDTI+VSNLNRQFLF + HVG+SK
Sbjct: 13 EAVKAAKVLMVGAGGIGCELLKTLALSGFRDIHIIDLDTIEVSNLNRQFLFRQSHVGQSK 72
Query: 318 AQVAKDSALSFNPNVTIVAHHDSVISNDYGVKYFKQFNIVMNALDNRVARNHVNRLCLAA 497
A VA+D+ L F PN+ I ++H +V + V++FKQFN+V+N LDN AR HVNRLCLAA
Sbjct: 73 AHVARDAVLKFRPNINITSYHANVKDAQFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAA 132
Query: 498 DVPLIETGTAGYAGQVELIKKGLTQCYECQPKAPQKSFPGCTIRNTPSEPIHCIVWGK 671
+VPL+E+GT G+ GQV + KG T+CYECQPK KS+P CTI +TPS+ +HCIVW K
Sbjct: 133 EVPLVESGTTGFLGQVTVHVKGKTECYECQPKPVPKSYPVCTITSTPSKFVHCIVWAK 190
>01_01_1178 +
9385261-9385374,9385457-9385620,9386251-9386453,
9387130-9387362,9387584-9387640,9388120-9388241,
9388366-9388425,9388426-9388543,9389005-9389286
Length = 450
Score = 142 bits (344), Expect = 2e-34
Identities = 79/183 (43%), Positives = 109/183 (59%), Gaps = 15/183 (8%)
Frame = +3
Query: 156 KLLVVGAGGIGCEILKNLVLTGFPYIEIIDLDTIDVSNLNRQFLFHKEHVGKSKAQVAKD 335
++LVVGAGG+GCE+LK+L L+GF I +ID+DTIDVSNLNRQFLF + VGKSKA+VA
Sbjct: 48 EVLVVGAGGLGCELLKDLALSGFKNIHVIDMDTIDVSNLNRQFLFRVQDVGKSKAEVAAK 107
Query: 336 SALSFNPNVTIVAHHDSVISNDYGVKYFKQFNIVMNALDNRVARNHVNRLCL------AA 497
+ V IV H + D ++++ QF+I++ LD+ AR+++N + +
Sbjct: 108 RVMERVSGVNIVPHFCRI--EDKEIEFYSQFSIIVLGLDSIEARSYINSVACGFLEYDSD 165
Query: 498 DVPLIET-------GTAGYAGQVELIKKGLTQCYECQ--PKAPQKSFPGCTIRNTPSEPI 650
D P+ ET GT G+ G +I G T C+EC PQ FP CT+ TP
Sbjct: 166 DKPIPETLKPMVDGGTEGFKGHARVIIPGTTPCFECNIWLFPPQVKFPLCTLAETPRTAA 225
Query: 651 HCI 659
HCI
Sbjct: 226 HCI 228
>12_01_0038 - 312152-312748,312930-313362,313572-314440,314535-314584,
314589-315192,315674-315718,316100-316317,317020-317332,
318681-318716
Length = 1054
Score = 124 bits (300), Expect = 5e-29
Identities = 63/197 (31%), Positives = 107/197 (54%), Gaps = 8/197 (4%)
Frame = +3
Query: 117 VFDEKLTEAIANSKLLVVGAGGIGCEILKNLVLTGFPY-----IEIIDLDTIDVSNLNRQ 281
VF L + + +K+ +VG+G +GCE LKNL L G + + D D I+ SNL+RQ
Sbjct: 455 VFGSNLQKKLEQAKIFMVGSGALGCEFLKNLALMGISCNQNGKLTVTDDDVIEKSNLSRQ 514
Query: 282 FLFHKEHVGKSKAQVAKDSALSFNPNVTIVAHHDSV---ISNDYGVKYFKQFNIVMNALD 452
FLF ++G+ K+ VA +A++ NP + + A + N + +++ + V+NALD
Sbjct: 515 FLFRDWNIGQPKSTVAATAAMAINPKLHVEALQNRASPETENVFNDAFWESLDAVVNALD 574
Query: 453 NRVARNHVNRLCLAADVPLIETGTAGYAGQVELIKKGLTQCYECQPKAPQKSFPGCTIRN 632
N AR +++ C+ PL+E+GT G +++ LT+ Y P+K P CT+ +
Sbjct: 575 NVTARMYIDSRCVYFQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHS 634
Query: 633 TPSEPIHCIVWGKTPLQ 683
P HC+ W ++ +
Sbjct: 635 FPHNIDHCLTWARSEFE 651
Score = 52.8 bits (121), Expect = 3e-07
Identities = 29/99 (29%), Positives = 51/99 (51%)
Frame = +3
Query: 72 RSVEV*IKMVARVAGVFDEKLTEAIANSKLLVVGAGGIGCEILKNLVLTGFPYIEIIDLD 251
R+ E+ + +R V+ + + + S +LV G G+G EI KNLVL G + + D D
Sbjct: 75 RAPEIDEDLHSRQLAVYGRETMKRLFASNVLVSGLNGLGAEIAKNLVLAGVKSVTLHDDD 134
Query: 252 TIDVSNLNRQFLFHKEHVGKSKAQVAKDSALSFNPNVTI 368
+++ +L+ F ++ VG+++AQ N V I
Sbjct: 135 NVELWDLSSNFFLTEKDVGQNRAQTCVQKLQELNNAVII 173
>11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-292513,
295071-295646,295828-296260,296470-297338,297433-298227,
298709-298753,299135-299352,300055-300364,302715-302984
Length = 1331
Score = 124 bits (298), Expect = 9e-29
Identities = 63/197 (31%), Positives = 107/197 (54%), Gaps = 8/197 (4%)
Frame = +3
Query: 117 VFDEKLTEAIANSKLLVVGAGGIGCEILKNLVLTGFPYIE-----IIDLDTIDVSNLNRQ 281
VF L + + +K+ +VG+G +GCE LKNL L G + + D D I+ SNL+RQ
Sbjct: 579 VFGSNLQKKLEQAKIFMVGSGALGCEFLKNLALMGISCNQNGKLIVTDDDVIEKSNLSRQ 638
Query: 282 FLFHKEHVGKSKAQVAKDSALSFNPNVTIVAHHDSV---ISNDYGVKYFKQFNIVMNALD 452
FLF ++G+ K+ VA +A++ NP + + A + N + +++ + V+NALD
Sbjct: 639 FLFRDWNIGQPKSTVAATAAMAINPKLHVEALQNRASPETENVFNDAFWESLDAVVNALD 698
Query: 453 NRVARNHVNRLCLAADVPLIETGTAGYAGQVELIKKGLTQCYECQPKAPQKSFPGCTIRN 632
N AR +++ C+ PL+E+GT G +++ LT+ Y P+K P CT+ +
Sbjct: 699 NVTARMYIDSRCVYFQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHS 758
Query: 633 TPSEPIHCIVWGKTPLQ 683
P HC+ W ++ +
Sbjct: 759 FPHNIDHCLTWARSEFE 775
Score = 53.2 bits (122), Expect = 2e-07
Identities = 29/99 (29%), Positives = 51/99 (51%)
Frame = +3
Query: 72 RSVEV*IKMVARVAGVFDEKLTEAIANSKLLVVGAGGIGCEILKNLVLTGFPYIEIIDLD 251
R+ E+ + +R V+ + + + S +LV G G+G EI KNLVL G + + D D
Sbjct: 152 RAPEIDEDLHSRQLAVYGRETMKRLFASNVLVSGLNGLGAEIAKNLVLAGVKSVNLHDDD 211
Query: 252 TIDVSNLNRQFLFHKEHVGKSKAQVAKDSALSFNPNVTI 368
+++ +L+ F ++ VG+++AQ N V I
Sbjct: 212 NVELWDLSSNFFLTEKDVGQNRAQTCVQKLQELNNAVII 250
>03_02_0665 - 10268959-10269148,10269344-10269936,10270572-10271004,
10271172-10272040,10272121-10272915,10273612-10273829,
10274931-10275230,10276834-10277161
Length = 1241
Score = 120 bits (290), Expect = 8e-28
Identities = 66/197 (33%), Positives = 109/197 (55%), Gaps = 8/197 (4%)
Frame = +3
Query: 117 VFDEKLTEAIANSKLLVVGAGGIGCEILKNLVLTGFPY-----IEIIDLDTIDVSNLNRQ 281
VF KL + + ++ + VVG+G +GCE LKNL L G + I D D I+ SNL+RQ
Sbjct: 580 VFGSKLQKKMRDANVFVVGSGALGCEFLKNLALMGVSCGLKGKLTITDDDIIEKSNLSRQ 639
Query: 282 FLFHKEHVGKSKAQVAKDSALSFNPNVTIVAHHDSVISNDYGV---KYFKQFNIVMNALD 452
FLF ++G++K+ VA +A + N ++ I A + V K+++ ++++NALD
Sbjct: 640 FLFRDWNIGQAKSTVAAAAASAINSSLHINALQNRACPETEHVFHDKFWEGLDVIINALD 699
Query: 453 NRVARNHVNRLCLAADVPLIETGTAGYAGQVELIKKGLTQCYECQPKAPQKSFPGCTIRN 632
N AR +++ CL PL+E+GT G +++ LT+ Y P+K P CT+ +
Sbjct: 700 NVNARMYMDMRCLYFQKPLLESGTLGPKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHS 759
Query: 633 TPSEPIHCIVWGKTPLQ 683
P HC+ W ++ +
Sbjct: 760 FPHNIDHCLTWARSEFE 776
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/105 (26%), Positives = 55/105 (52%)
Frame = +3
Query: 102 ARVAGVFDEKLTEAIANSKLLVVGAGGIGCEILKNLVLTGFPYIEIIDLDTIDVSNLNRQ 281
+R V+ + + S +LV G G+G EI KNL L G I + D+ +++ +L+
Sbjct: 178 SRQLAVYGRETMRRLFASNVLVSGLNGLGAEIAKNLALAGVKSITLHDMGNVEMWDLSGN 237
Query: 282 FLFHKEHVGKSKAQVAKDSALSFNPNVTIVAHHDSVISNDYGVKY 416
F ++ +GK++A VA + L N +++ ++N++ K+
Sbjct: 238 FFLSEDDIGKNRA-VACTAKLQELNNAVLISTLTEDLTNEHLSKF 281
>07_03_1774 + 29425486-29425831,29426018-29426235,29426337-29427131,
29427206-29428074,29428317-29428749,29429263-29429859
Length = 1085
Score = 119 bits (286), Expect = 3e-27
Identities = 66/197 (33%), Positives = 106/197 (53%), Gaps = 8/197 (4%)
Frame = +3
Query: 117 VFDEKLTEAIANSKLLVVGAGGIGCEILKNLVLTGFPY-----IEIIDLDTIDVSNLNRQ 281
VF KL + + + VVG+G +GCE LKNL L G + I D D I+ SNL+RQ
Sbjct: 486 VFGSKLQKKLEEANTFVVGSGALGCEFLKNLALMGVSCSPKGKLTITDDDVIEKSNLSRQ 545
Query: 282 FLFHKEHVGKSKAQVAKDSALSFNPNVTIVAHHDSVISNDYGV---KYFKQFNIVMNALD 452
FLF ++ ++K+ VA +A + NPN+ I A + + V +++ ++V+NALD
Sbjct: 546 FLFRDWNIRQAKSTVAAAAASAINPNLCIDALQNRACPDTENVFHDTFWEGLDVVINALD 605
Query: 453 NRVARNHVNRLCLAADVPLIETGTAGYAGQVELIKKGLTQCYECQPKAPQKSFPGCTIRN 632
N AR +++ CL L+E+GT G +++ LT+ Y P+K P CT+ +
Sbjct: 606 NVNARMYMDMRCLYFQKALLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHS 665
Query: 633 TPSEPIHCIVWGKTPLQ 683
P HC+ W ++ +
Sbjct: 666 FPHNIDHCLTWARSEFE 682
Score = 31.9 bits (69), Expect = 0.50
Identities = 16/72 (22%), Positives = 34/72 (47%)
Frame = +3
Query: 201 KNLVLTGFPYIEIIDLDTIDVSNLNRQFLFHKEHVGKSKAQVAKDSALSFNPNVTIVAHH 380
KNL L G + + D+ +++ +L+ F + +GK++A N N +V+
Sbjct: 117 KNLALAGVKSVTLHDVKNVEMWDLSANFFLSENDIGKNRAAACVSKLQELN-NAVLVSAL 175
Query: 381 DSVISNDYGVKY 416
++ D+ K+
Sbjct: 176 TEELTTDHLSKF 187
>02_04_0046 +
19211961-19212231,19212651-19212706,19212947-19213011,
19213138-19213212,19213305-19213383,19213591-19213629,
19213712-19213820,19214334-19214452,19215282-19215401,
19215846-19216232
Length = 439
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/116 (27%), Positives = 66/116 (56%)
Frame = +3
Query: 237 IIDLDTIDVSNLNRQFLFHKEHVGKSKAQVAKDSALSFNPNVTIVAHHDSVISNDYGVKY 416
I+D D ++++NL+RQ + + VGKSK + A D+ N ++ ++ +H ++ ++ ++
Sbjct: 95 IVDGDDVELNNLHRQIIHKEAFVGKSKVKSAADACREINSSINVMEYHHTLKPSN-ALEI 153
Query: 417 FKQFNIVMNALDNRVARNHVNRLCLAADVPLIETGTAGYAGQVELIKKGLTQCYEC 584
++++IV++A DN R ++ C+ + PLI G GQ+ + + CY C
Sbjct: 154 VRKYDIVVDATDNLPTRYMISDCCVLLNKPLISGAALGLEGQLTVYHHNGSPCYRC 209
>02_05_1131 -
34328168-34328557,34328838-34328957,34329067-34329185,
34329659-34329767,34329847-34329885,34341125-34341203,
34341483-34341547,34341850-34341905,34342141-34342233,
34342312-34342579
Length = 445
Score = 55.6 bits (128), Expect = 4e-08
Identities = 41/155 (26%), Positives = 71/155 (45%)
Frame = +3
Query: 144 IANSKLLVVGAGGIGCEILKNLVLTGFPYIEIIDLDTIDVSNLNRQFLFHKEHVGKSKAQ 323
++ S +LVVGAGG+G + L G + I+D D +++ NL+RQ + + +VG+ K
Sbjct: 94 LSQSSILVVGAGGLGSPVAMYLAACGVGCLGIVDGDRVELDNLHRQIIHIEAYVGQPK-- 151
Query: 324 VAKDSALSFNPNVTIVAHHDSVISNDYGVKYFKQFNIVMNALDNRVARNHVNRLCLAADV 503
K +A S + ++IV++A +N +R ++ C+ +
Sbjct: 152 -VKSTAAS-----------------------CRAYDIVVDATNNLPSRYMISDCCVLMNK 187
Query: 504 PLIETGTAGYAGQVELIKKGLTQCYECQPKAPQKS 608
PLI G GQ+ + + CY C P S
Sbjct: 188 PLISGSAVGLEGQLTVYHHNGSPCYRCLYPNPPSS 222
>11_04_0388 +
17076157-17076254,17076762-17076813,17077672-17077867,
17078242-17078321,17078465-17078581,17078895-17078950,
17079238-17079268,17079292-17079342,17080411-17080477,
17080621-17080724,17080802-17080909,17081874-17081987
Length = 357
Score = 47.6 bits (108), Expect = 9e-06
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Frame = +3
Query: 105 RVAGVFDEKLTEAIANSKLLVVGAGGIGCEILKNLVLTGFPYIEIIDLDTIDVSNLNRQF 284
RV GV +K ++ + +LV G G E KN+VL G + ++D + +LN F
Sbjct: 24 RVWGVDAQK---RLSKAHVLVCGMNGTTTEFCKNIVLAGVGSLSLMDDHLVTEDDLNANF 80
Query: 285 LF-HKEHV--GKSKAQVAKDSALSFNPNVTI 368
L H E + G+S+A+V +S FNP V +
Sbjct: 81 LIPHDESIYGGRSRAEVCCESLKDFNPMVRV 111
>06_01_1006 +
7836366-7836460,7836568-7836626,7836877-7836961,
7837349-7837496,7837774-7837986,7838403-7838537,
7838659-7838790,7838884-7839099,7839212-7839336,
7839787-7839844,7839977-7840087
Length = 458
Score = 44.4 bits (100), Expect = 9e-05
Identities = 26/98 (26%), Positives = 46/98 (46%)
Frame = +3
Query: 81 EV*IKMVARVAGVFDEKLTEAIANSKLLVVGAGGIGCEILKNLVLTGFPYIEIIDLDTID 260
EV + + R F + + + S ++V+G GG+G L+ +G + ++D D +
Sbjct: 72 EVVSEQLTRNIQFFGMESQKKVTGSFVVVIGLGGVGSHAASMLLRSGVGRLLLVDFDQVS 131
Query: 261 VSNLNRQFLFHKEHVGKSKAQVAKDSALSFNPNVTIVA 374
+S+LNR + ++ VG KA K P I A
Sbjct: 132 LSSLNRHAVATRDDVGTPKALCLKKHFSMIYPECQIEA 169
>03_06_0476 +
34199577-34199638,34200267-34200397,34200535-34200698,
34201007-34201117,34201308-34201387,34201489-34201639,
34201736-34201829,34202421-34202509,34203672-34203745,
34203859-34204021,34204445-34204530,34205011-34205094,
34205186-34205366,34205837-34205887
Length = 506
Score = 34.3 bits (75), Expect = 0.094
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 1/141 (0%)
Frame = +3
Query: 141 AIANSKLLVVGAGGIGCEILKNLVLTGFPYIEIIDLDTIDVSNLNRQFLFHKEHVGKSKA 320
A+ + + ++ G G E +KNLVL G + ++D+D E +G+S+A
Sbjct: 30 ALEKASICLLTCGPTGTEAMKNLVLGGVGSVTVVDVDA--------------ECLGQSRA 75
Query: 321 QVAKDSALSFNPNVTIVAHHDSVIS-NDYGVKYFKQFNIVMNALDNRVARNHVNRLCLAA 497
+ N V +S ++ D +F QF +V+ + ++ +C A
Sbjct: 76 KSVCSFLQELNDAVNAKFVEESPLALIDTNPSFFSQFTVVIATQLPERSLLKLDDICRKA 135
Query: 498 DVPLIETGTAGYAGQVELIKK 560
++ L+ + G G V + K
Sbjct: 136 NIVLVAARSYGLTGLVRISVK 156
>09_02_0099 +
4265550-4265663,4266794-4267024,4267619-4267681,
4267774-4268223
Length = 285
Score = 31.9 bits (69), Expect = 0.50
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = +1
Query: 586 SLKHHRNHSQVAQFVIHLQNLFTALYGAKHLFNQIV 693
SLK N + + FVIHL L L+ AKHL N IV
Sbjct: 36 SLKLLNNINHLGLFVIHLFYLTEDLFKAKHLVNHIV 71
>01_05_0699 -
24376987-24377154,24377259-24377406,24377530-24377645,
24377743-24377925,24377998-24378186,24378273-24378497,
24378514-24378759,24378836-24378983,24379126-24379241,
24379441-24379497,24379735-24379923,24380001-24380150,
24380323-24380404,24380484-24380601,24380713-24380899,
24381044-24381138,24381223-24381277,24381376-24381567,
24381657-24381853,24382534-24382684
Length = 1003
Score = 27.9 bits (59), Expect(2) = 0.84
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = +3
Query: 138 EAIANSKLLVVGAGGIGCEILKNLVLTGFPYIEI 239
E +++++ L++GAG +GC++ + +L + Y+E+
Sbjct: 637 EKLSSARCLLLGAGTLGCDVAR--ILMFYFYVEL 668
Score = 21.8 bits (44), Expect(2) = 0.84
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +3
Query: 219 GFPYIEIIDLDTIDVSNLNRQFLFHKEHVGKSKA 320
G + ++D + VSNL RQ L+ + KA
Sbjct: 689 GVRKLTVVDSGRVVVSNLARQSLYTSDDRDSPKA 722
>09_02_0121 +
4502628-4502696,4503727-4503829,4504205-4504328,
4505963-4506306,4506383-4506487,4507907-4508288,
4509173-4509437,4509936-4510094,4511150-4511201,
4511266-4511462,4512865-4513350,4513797-4514093
Length = 860
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +3
Query: 300 HVGKSKAQVAKDSALSFNPNVTIVAHHDSVISNDYGVKYFKQFNI 434
HVG A DS+ S N T+VA SV S+D FK+ N+
Sbjct: 712 HVGNHGAYGTYDSSPSIYTNNTMVASGTSVESDDISGSQFKETNV 756
>08_02_0781 -
21157715-21157783,21158869-21159087,21161181-21161329,
21161694-21161932,21162045-21162229
Length = 286
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 375 HHDSVISNDYGVKYFKQFNIVMNALDNRVARNHVNRLC 488
HH S + DY +K I A D R+ARNH + LC
Sbjct: 164 HHTSFLW-DYDMKNMDYLKIPKRAPDYRLARNHTDFLC 200
>05_05_0278 -
23786507-23786875,23787191-23787315,23787499-23787664,
23787844-23787979,23788286-23788378,23788505-23788611,
23788719-23788905,23789616-23789722,23789811-23790065,
23791241-23791306,23791363-23791401
Length = 549
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/78 (24%), Positives = 30/78 (38%)
Frame = +3
Query: 411 KYFKQFNIVMNALDNRVARNHVNRLCLAADVPLIETGTAGYAGQVELIKKGLTQCYECQP 590
K F N ++A N R H+ L AA ++ET + + L K + CY
Sbjct: 430 KLFSGLNFCLSAYINPDDRQHIQSLIAAAGGQILETNGGSHLLRENLEKVAVKPCYFVYD 489
Query: 591 KAPQKSFPGCTIRNTPSE 644
+ F + + P E
Sbjct: 490 GGAPRDFTQGLLDDLPKE 507
>03_01_0525 +
3952095-3952217,3953131-3953614,3953695-3953750,
3953942-3954018,3954862-3954958,3955274-3955407,
3955760-3955825,3955954-3956044
Length = 375
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 250 SRSIISIYGKPVSTRFLRISQPMPPAPTTSNLEFAIASVNFSSKTPA 110
+R++ + G STR +RIS +P T S L++ A V TPA
Sbjct: 165 NRAMTEMNGMYCSTRPMRISAAIPKKTTGSQLQYGAAKVALLICTPA 211
>05_05_0006 + 21450739-21451434
Length = 231
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = -1
Query: 301 CSL*KRN*RFKLLTSIVSRSIISIYGKPVSTRFLRISQPMPPAPTTSNLEFAIASVNFSS 122
CS K+ LL+S+VSR+ ++ G+ VS R PP+ + S A A+ +S
Sbjct: 32 CSCPKQRLLRSLLSSLVSRARGALGGRAVS----RPKSSAPPSSSASTTTTAAAAFTSTS 87
Query: 121 KTPATLATI 95
T A+ T+
Sbjct: 88 TTGASATTV 96
>01_07_0205 - 41978437-41980599,41980805-41981215
Length = 857
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 90 IKMVARVAGVFDEKLTEAIANSKLLVVGAGGIGCEILKNLV 212
+K++ R + FD L E +A+ + +VG GGIG L +V
Sbjct: 116 LKVIPRHSKEFDVALQEELADVFVSIVGMGGIGKTTLAQMV 156
>09_02_0501 -
9955987-9956244,9956329-9956583,9956713-9956884,
9957000-9957227,9959102-9959235,9959319-9959402,
9959539-9959829,9960076-9960405,9960526-9960668,
9960970-9961126,9961210-9961313,9961423-9961583,
9961664-9961980,9962094-9962375,9962471-9962772,
9962848-9962938,9963262-9963338,9963428-9963587,
9963682-9963766,9963838-9963949,9964864-9964943,
9968644-9968981
Length = 1386
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = -3
Query: 560 FLDELHLTSISCCTCLYKRYISSKTQSINMVTGNTIVQCIHHNVELFEVFYTIVI 396
F+DE+ LT + T + ++S Q+++++ G TI+ + E +E+F I+I
Sbjct: 326 FMDEI-LTGLDSSTTF--QIVNSIRQTVHILGGTTIIALLQPAPETYELFDEIII 377
>05_03_0289 - 11688733-11691342
Length = 869
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +3
Query: 300 HVGKSKAQVAKDSALSFNPNVTIVAHHDSVISNDYGVKYFKQFNIVMNALDNRVARNHVN 479
H SK+ + +AL NPN+T + H S K F + ++ +V R V+
Sbjct: 492 HTSTSKSSGGRSAAL-INPNITAMCRHFSFGEIKSATKNFDESLVIGVGGFGKVYRGVVD 550
Query: 480 ---RLCLAADVPLIETGTAGYAGQVELIKK 560
++ + P E G + ++E++ K
Sbjct: 551 GDTKVAIKRSNPSSEQGVLEFQTEIEMLSK 580
>05_01_0078 - 523366-525196,525622-525675,527135-529341
Length = 1363
Score = 28.7 bits (61), Expect = 4.7
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Frame = +3
Query: 231 IEIIDLDTIDVSNLNRQFLFHKEHVGKSKAQVAKDSALSF----NPNVTIVAHHDSVISN 398
IE + +D +V +N K A+D L NP V I+ + + S+
Sbjct: 1178 IEDLSIDKDEVLIINCMSRMRKLGDETENIDSARDRVLHMMKRMNPQVFILGVVNGLYSS 1237
Query: 399 DYGVKYFKQ----FNIVMNALDNRVARNHVNRLCLAADV 503
+ + F++ ++ + + LDN V RNH R+ + D+
Sbjct: 1238 PFFLTRFREVLFHYSSLFDMLDNNVPRNHEARILVEKDL 1276
>01_06_0356 +
28662956-28664043,28664255-28665139,28665227-28665840,
28665929-28666338
Length = 998
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Frame = -1
Query: 187 PMPPAPTT-SNLE-FAIASVNFSSKTPATLATI----LIYTSTDRIT 65
P+P P+ NL+ F++A NF+ P+ LAT+ IY ST+ +T
Sbjct: 279 PIPSGPSKCQNLDLFSLAVNNFTGSVPSWLATMPNLTAIYLSTNELT 325
>08_02_0417 -
16904476-16904662,16904846-16905029,16905150-16905897,
16906003-16906227,16906318-16906485,16906803-16907453
Length = 720
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/62 (27%), Positives = 26/62 (41%)
Frame = -1
Query: 238 ISIYGKPVSTRFLRISQPMPPAPTTSNLEFAIASVNFSSKTPATLATILIYTSTDRITKL 59
+ + P S RI P P +P ++ A S + +PA + I TST + L
Sbjct: 516 LDVSNVPQSAMDGRIPSPSPQSPVSARTSSATPSPTARTPSPAPPSPIATKTSTSVVLSL 575
Query: 58 CA 53
A
Sbjct: 576 AA 577
>04_03_0399 - 15414405-15416717,15416739-15417524,15417776-15417784
Length = 1035
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 10/50 (20%)
Frame = +3
Query: 186 GCEILKNLVLTGFP----------YIEIIDLDTIDVSNLNRQFLFHKEHV 305
GC LK L+L+G P +E +DLD + LNR LF H+
Sbjct: 569 GCCRLKKLILSGLPKLEELDLSGTILEKLDLDAMQAEKLNRLLLFGCLHL 618
>04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093
Length = 1040
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 10/50 (20%)
Frame = +3
Query: 186 GCEILKNLVLTGFP----------YIEIIDLDTIDVSNLNRQFLFHKEHV 305
GC LK L+L+G P +E +DLD + LNR LF H+
Sbjct: 569 GCCRLKKLILSGLPKLEELDLSGTILEKLDLDAMQAEKLNRLLLFGCLHL 618
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,343,669
Number of Sequences: 37544
Number of extensions: 373268
Number of successful extensions: 1119
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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