Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23k03
(697 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82062-5|CAB54319.4| 582|Caenorhabditis elegans Hypothetical pr... 233 7e-62
U40187-3|AAA81160.2| 430|Caenorhabditis elegans Ectopic membran... 152 3e-37
Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical p... 139 2e-33
Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical p... 139 2e-33
AF038618-6|AAB92067.2| 402|Caenorhabditis elegans Hypothetical ... 97 8e-21
U88169-12|AAB42231.1| 419|Caenorhabditis elegans Hypothetical p... 76 3e-14
U13875-1|AAA21162.2| 541|Caenorhabditis elegans Yeast ula (ubiq... 54 7e-08
Z72502-6|CAA96591.1| 343|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z68337-10|CAA92753.1| 647|Caenorhabditis elegans Hypothetical p... 50 2e-06
AL032641-8|CAA21650.1| 647|Caenorhabditis elegans Hypothetical ... 50 2e-06
Z81579-5|CAB04654.3| 1305|Caenorhabditis elegans Hypothetical pr... 35 0.064
AY959881-1|AAX56914.1| 1305|Caenorhabditis elegans nephrocystin-... 35 0.064
Z66500-4|CAA91305.2| 630|Caenorhabditis elegans Hypothetical pr... 32 0.34
Z73974-2|CAA98271.2| 713|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z71261-7|CAI70415.1| 570|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z71261-6|CAA95803.3| 578|Caenorhabditis elegans Hypothetical pr... 27 9.7
AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical... 27 9.7
>Z82062-5|CAB54319.4| 582|Caenorhabditis elegans Hypothetical
protein W02A11.4 protein.
Length = 582
Score = 233 bits (571), Expect = 7e-62
Identities = 104/179 (58%), Positives = 132/179 (73%), Gaps = 1/179 (0%)
Frame = +3
Query: 138 EAIANSKLLVVGAGGIGCEILKNLVLTGFPYIEIIDLDTIDVSNLNRQFLFHKEHVGKSK 317
E I SK+LV+GAGGIGCE+LKNL +TGF + +IDLDTID+SNLNRQFLF KEHV SK
Sbjct: 9 EKIVQSKILVIGAGGIGCELLKNLAVTGFRKVHVIDLDTIDISNLNRQFLFRKEHVSSSK 68
Query: 318 AQVAKDSALSFNPNVTIVAHHDSVISNDYGVKYFKQFNIVMNALDNRVARNHVNRLCLAA 497
A A F P + + HDS+ Y +++F+ ++IV+NALDNR ARN+VNR+C AA
Sbjct: 69 AATATQVVKQFCPQIELTFDHDSIFEKKYNMEFFQAYDIVLNALDNRAARNYVNRMCHAA 128
Query: 498 DVPLIETGTAGYAGQVELIKKGLTQCYECQPK-APQKSFPGCTIRNTPSEPIHCIVWGK 671
+ PLI++G+ GY GQV +I +G T+CYEC K Q ++PGCTIRNTPSE IHC VW K
Sbjct: 129 NRPLIDSGSGGYFGQVSVIMRGKTECYECVDKPVQQTTYPGCTIRNTPSEHIHCTVWAK 187
>U40187-3|AAA81160.2| 430|Caenorhabditis elegans Ectopic membrane
ruffles in embryoprotein 1 protein.
Length = 430
Score = 152 bits (368), Expect = 3e-37
Identities = 86/198 (43%), Positives = 120/198 (60%), Gaps = 15/198 (7%)
Frame = +3
Query: 138 EAIANSKLLVVGAGGIGCEILKNLVLTGFPYIEIIDLDTIDVSNLNRQFLFHKEHVGKSK 317
EA+ N+K+LV+GAGG+GCE+LKNL L+GF IE+ID+DTIDVSNLNRQFLF + VGKSK
Sbjct: 38 EALQNTKILVIGAGGLGCELLKNLALSGFRTIEVIDMDTIDVSNLNRQFLFRESDVGKSK 97
Query: 318 AQVAKDSALSFNPNVTIVAHHDSVISNDYGVKYFKQFNIVMNALDNRVARNHVN-RLC-- 488
A+VA + AH+ + D G +++++F+I++ LD+ AR +N LC
Sbjct: 98 AEVAAAFVQQRVVGCQVTAHNCRI--EDKGQEFYRKFSIIICGLDSIPARRWINGMLCDL 155
Query: 489 --LAAD--------VPLIETGTAGYAGQVELIKKGLTQCYEC--QPKAPQKSFPGCTIRN 632
AD +P+I+ GT G+ G +I T C +C PQ +FP CTI +
Sbjct: 156 VLEMADGKPDENTIIPMIDGGTEGFKGNARVIYPKFTACIDCTLDLYPPQVNFPLCTIAH 215
Query: 633 TPSEPIHCIVWGKTPLQP 686
TP P HCI + K + P
Sbjct: 216 TPRLPEHCIEYIKVVVWP 233
>Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical
protein C47E12.5b protein.
Length = 1028
Score = 139 bits (336), Expect = 2e-33
Identities = 75/195 (38%), Positives = 111/195 (56%), Gaps = 8/195 (4%)
Frame = +3
Query: 111 AGVFDEKLTEAIANSKLLVVGAGGIGCEILKNLVLTGFP-----YIEIIDLDTIDVSNLN 275
A VF E + + VVGAG IGCE+LKNL + G I+I D+D I++SNLN
Sbjct: 419 AAVFGWPYQECLFRQRWFVVGAGAIGCELLKNLSMMGVACGEGGLIKITDMDQIEISNLN 478
Query: 276 RQFLFHKEHVGKSKAQVAKDSALSFNPNVTIVAHHDSV---ISNDYGVKYFKQFNIVMNA 446
RQFLF + VG K++ A + +FN +V I A + V + + ++F + N V NA
Sbjct: 479 RQFLFRRRDVGGKKSECAARAVTAFNSDVRIEALAERVGLETEHIFNDEFFGELNGVANA 538
Query: 447 LDNRVARNHVNRLCLAADVPLIETGTAGYAGQVELIKKGLTQCYECQPKAPQKSFPGCTI 626
LDN AR +++R C+ +PL+E+GT G G +++ LT+ Y P+K P CT+
Sbjct: 539 LDNVDARRYMDRRCVYYRLPLLESGTMGTKGNTQVVYPYLTESYSSSVDPPEKEIPVCTL 598
Query: 627 RNTPSEPIHCIVWGK 671
+N P+E H I W +
Sbjct: 599 KNFPNEIQHTIQWAR 613
>Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical
protein C47E12.5a protein.
Length = 1113
Score = 139 bits (336), Expect = 2e-33
Identities = 75/195 (38%), Positives = 111/195 (56%), Gaps = 8/195 (4%)
Frame = +3
Query: 111 AGVFDEKLTEAIANSKLLVVGAGGIGCEILKNLVLTGFP-----YIEIIDLDTIDVSNLN 275
A VF E + + VVGAG IGCE+LKNL + G I+I D+D I++SNLN
Sbjct: 504 AAVFGWPYQECLFRQRWFVVGAGAIGCELLKNLSMMGVACGEGGLIKITDMDQIEISNLN 563
Query: 276 RQFLFHKEHVGKSKAQVAKDSALSFNPNVTIVAHHDSV---ISNDYGVKYFKQFNIVMNA 446
RQFLF + VG K++ A + +FN +V I A + V + + ++F + N V NA
Sbjct: 564 RQFLFRRRDVGGKKSECAARAVTAFNSDVRIEALAERVGLETEHIFNDEFFGELNGVANA 623
Query: 447 LDNRVARNHVNRLCLAADVPLIETGTAGYAGQVELIKKGLTQCYECQPKAPQKSFPGCTI 626
LDN AR +++R C+ +PL+E+GT G G +++ LT+ Y P+K P CT+
Sbjct: 624 LDNVDARRYMDRRCVYYRLPLLESGTMGTKGNTQVVYPYLTESYSSSVDPPEKEIPVCTL 683
Query: 627 RNTPSEPIHCIVWGK 671
+N P+E H I W +
Sbjct: 684 KNFPNEIQHTIQWAR 698
>AF038618-6|AAB92067.2| 402|Caenorhabditis elegans Hypothetical
protein F42G8.6 protein.
Length = 402
Score = 97.5 bits (232), Expect = 8e-21
Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 1/153 (0%)
Frame = +3
Query: 144 IANSKLLVVGAGGIGCEILKNLVLTGFPYIEIIDLDTIDVSNLNRQFLFHKEHVGKSKAQ 323
+ N +L+VGAGG+GC + L G I I+D D I + NL+RQ + ++ VGKSKAQ
Sbjct: 35 LKNLNVLIVGAGGLGCPVATYLGAAGIGTIGIVDYDHISLDNLHRQVAYKEDQVGKSKAQ 94
Query: 324 VAKDSALSFNPNVTIVAHHDSVISNDYGVKYFKQFNIVMNALDNRVARNHVNRLCLAADV 503
D+ N ++ + H+ S+ S++ ++ FK + IV + DN R +N +C+ ++
Sbjct: 95 ALADNIKLQNSDLNVQVHNTSLDSSN-AMQLFKNYEIVCDCTDNVATRYLINDVCVLLNI 153
Query: 504 PLIETGTAGYAGQVELIKKGL-TQCYECQPKAP 599
PL+ + GQ+ + G CY C +P
Sbjct: 154 PLVSGSALRWDGQLSVYHYGSDCPCYRCLFPSP 186
>U88169-12|AAB42231.1| 419|Caenorhabditis elegans Hypothetical
protein T03F1.1 protein.
Length = 419
Score = 75.8 bits (178), Expect = 3e-14
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 12/163 (7%)
Frame = +3
Query: 138 EAIANSKLLVVGAGGIGCEILKNLVLTGFPYIEIIDLDTIDVSNLNRQFLFHKEHVGKSK 317
E I + VVG GG+G + + L G + + D D ++++N+NR F + G SK
Sbjct: 80 ERIREKTVAVVGVGGVGSVVAEMLTRCGIGKLILFDYDKVEIANMNRLF-YQPNQAGLSK 138
Query: 318 AQVAKDSALSFNPNVTIVAHHDSVISND----------YGVKYFKQFNIVMNALDNRVAR 467
+ A+D+ + NP+V I H+ ++ + D G + ++V++ +DN AR
Sbjct: 139 VEAARDTLIHVNPDVQIEVHNFNITTMDNFDTFVNRIRKGSLTDGKIDLVLSCVDNFEAR 198
Query: 468 NHVNRLCLAADVPLIETGTA--GYAGQVELIKKGLTQCYECQP 590
VN C + +E+G + +G ++ I+ G T C+ C P
Sbjct: 199 MAVNMACNEENQIWMESGVSENAVSGHIQYIEPGKTACFACVP 241
>U13875-1|AAA21162.2| 541|Caenorhabditis elegans Yeast ula
(ubiquitin activating)homolog protein 1 protein.
Length = 541
Score = 54.4 bits (125), Expect = 7e-08
Identities = 35/154 (22%), Positives = 73/154 (47%), Gaps = 2/154 (1%)
Frame = +3
Query: 105 RVAGVFDEKLTEAIANSKLLVVGAGGIGCEILKNLVLTGFPYIEIIDLDTIDVSNLNRQF 284
R ++ E+ +I ++ V+G+ + EILK+LVL G ++D ++ +++ + F
Sbjct: 12 RQVRLWGEEGQASIGSTSACVLGSDSLATEILKSLVLAGVQSFYVVDDAKVEQADIGQNF 71
Query: 285 LFHKEHVGKSKAQVAKDSALSFNPNVTIVAHHD--SVISNDYGVKYFKQFNIVMNALDNR 458
H + +G+S+A+ + NP+V+ A + ++ + V+ F++V+ A N
Sbjct: 72 FLHADDIGRSRAEATLEKLTELNPSVSGSASSQPPTALAME-DVEKLTTFSVVVAANQNE 130
Query: 459 VARNHVNRLCLAADVPLIETGTAGYAGQVELIKK 560
++ VP I T G G + + K
Sbjct: 131 EIDTTFAKVLYNIRVPFICIKTFGLIGTIRICIK 164
>Z72502-6|CAA96591.1| 343|Caenorhabditis elegans Hypothetical
protein C08B6.9 protein.
Length = 343
Score = 52.0 bits (119), Expect = 4e-07
Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 5/137 (3%)
Frame = +3
Query: 144 IANSKLLVVGAGGIGCEILKNLVLTGFPYIEIIDLDTIDVSNLNRQFLFHK--EHVGKSK 317
I NSK+L++G +G E+ K L L G + ++D +D + FL+ ++ +K
Sbjct: 26 IRNSKVLIIGGKQLGAEVAKTLSLAGVDEMHLVDHRLVDTEEIGMNFLYDASVDNSKMTK 85
Query: 318 AQVAKDSALSFNPNVTIVAHHDSVIS-NDYGV-KYFKQFNIVMNALDNRVARN-HVNRLC 488
+ + + N NV + + V+S ND + +Y +F +V+ LD R VN +C
Sbjct: 86 WAASYNFLYNLNRNVKLFIVEEDVLSKNDSEIEEYLTKFTLVV-VLDESYERTAKVNNIC 144
Query: 489 LAADVPLIETGTAGYAG 539
+ I G+ G
Sbjct: 145 RKHHIRFISGAIYGWIG 161
>Z68337-10|CAA92753.1| 647|Caenorhabditis elegans Hypothetical
protein M7.5 protein.
Length = 647
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +3
Query: 138 EAIANSKLLVVGAGGIGCEILKNLVLTGFPYIEIIDLDTIDVSNLNRQFL--FHKEHVGK 311
E + K+L++GAG +GC I + L+ G +I +D T+ +N RQ L F +G+
Sbjct: 320 ERYSQLKVLILGAGTLGCNIARCLIGWGVRHISFLDNSTVSYNNPVRQSLSEFEDARLGR 379
Query: 312 SKAQVAKDSALSFNPNVTIVAHHDSV 389
KA+ A+ + P++ AH +V
Sbjct: 380 GKAETAQAAIQRIFPSIQATAHRLTV 405
>AL032641-8|CAA21650.1| 647|Caenorhabditis elegans Hypothetical
protein M7.5 protein.
Length = 647
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +3
Query: 138 EAIANSKLLVVGAGGIGCEILKNLVLTGFPYIEIIDLDTIDVSNLNRQFL--FHKEHVGK 311
E + K+L++GAG +GC I + L+ G +I +D T+ +N RQ L F +G+
Sbjct: 320 ERYSQLKVLILGAGTLGCNIARCLIGWGVRHISFLDNSTVSYNNPVRQSLSEFEDARLGR 379
Query: 312 SKAQVAKDSALSFNPNVTIVAHHDSV 389
KA+ A+ + P++ AH +V
Sbjct: 380 GKAETAQAAIQRIFPSIQATAHRLTV 405
>Z81579-5|CAB04654.3| 1305|Caenorhabditis elegans Hypothetical
protein R13H4.1 protein.
Length = 1305
Score = 34.7 bits (76), Expect = 0.064
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 543 VELIKKGLTQCYECQPKAPQKSFPGCTIRNTPSEPIHCIV 662
+E + KG+T C++ P +K F + N SEPI+C +
Sbjct: 880 LEAVFKGITSCHQINPSFGEKVFFEFPLENYNSEPINCTI 919
>AY959881-1|AAX56914.1| 1305|Caenorhabditis elegans
nephrocystin-4-like protein protein.
Length = 1305
Score = 34.7 bits (76), Expect = 0.064
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 543 VELIKKGLTQCYECQPKAPQKSFPGCTIRNTPSEPIHCIV 662
+E + KG+T C++ P +K F + N SEPI+C +
Sbjct: 880 LEAVFKGITSCHQINPSFGEKVFFEFPLENYNSEPINCTI 919
>Z66500-4|CAA91305.2| 630|Caenorhabditis elegans Hypothetical
protein T05C12.4 protein.
Length = 630
Score = 32.3 bits (70), Expect = 0.34
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +3
Query: 246 LDTIDVSNLNRQFLFHKEHVGKSKAQVAKDSALSFNPNVTIVAHHDSVI 392
++ D +N+ Q L H E+ A++ D++LS+NPN+T + H ++
Sbjct: 384 IEETDSNNVLDQLLTHAEN----NAEIPSDNSLSYNPNLTYFSLHSRLL 428
>Z73974-2|CAA98271.2| 713|Caenorhabditis elegans Hypothetical
protein F29F11.4 protein.
Length = 713
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +3
Query: 366 IVAHHDSVISNDYGVKYFKQFNIVMNALDNRVARNHVNRLCLAADVPLIETGTAGYAGQV 545
I H D+V+ ND +++ + V LD +H+ L+ + P TG YAGQ+
Sbjct: 67 IEMHKDAVLRNDSALRFRRAAEAVEWLLDELNLSDHIRD--LSEETPWTWTGAMFYAGQL 124
>Z71261-7|CAI70415.1| 570|Caenorhabditis elegans Hypothetical
protein F21C3.4b protein.
Length = 570
Score = 27.5 bits (58), Expect = 9.7
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 339 ALSFNPNVTIVAHHDSV-ISNDYGVKYFKQFNIVMNALDNRVARNHVNRLCLAADVPLI 512
ALS P + + +HD+ +++D+ Y K N V+ + NH+N L+AD LI
Sbjct: 466 ALS-KPELVVEQYHDNTEMNSDHHFYYLKATNGVLVTIPKERLLNHLNSK-LSADFDLI 522
>Z71261-6|CAA95803.3| 578|Caenorhabditis elegans Hypothetical
protein F21C3.4a protein.
Length = 578
Score = 27.5 bits (58), Expect = 9.7
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 339 ALSFNPNVTIVAHHDSV-ISNDYGVKYFKQFNIVMNALDNRVARNHVNRLCLAADVPLI 512
ALS P + + +HD+ +++D+ Y K N V+ + NH+N L+AD LI
Sbjct: 474 ALS-KPELVVEQYHDNTEMNSDHHFYYLKATNGVLVTIPKERLLNHLNSK-LSADFDLI 530
>AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical
protein Y116A8C.36 protein.
Length = 1097
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -1
Query: 529 PAVPVSIRGTSAARHNLLT 473
P+ PVSI GT ++RHN ++
Sbjct: 132 PSAPVSIAGTPSSRHNSIS 150
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,074,286
Number of Sequences: 27780
Number of extensions: 340182
Number of successful extensions: 1057
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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