Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23k01
         (680 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69383-3|CAA93409.1|  261|Caenorhabditis elegans Hypothetical pr...    32   0.33 
AL032635-3|CAB63374.1|  635|Caenorhabditis elegans Hypothetical ...    28   5.4  
Z74046-4|CAC42385.1|  162|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z74028-9|CAC42259.1|  162|Caenorhabditis elegans Hypothetical pr...    28   7.1  
U21324-12|AAA62559.1|  227|Caenorhabditis elegans Hypothetical p...    28   7.1  

>Z69383-3|CAA93409.1|  261|Caenorhabditis elegans Hypothetical
           protein F13E9.6 protein.
          Length = 261

 Score = 32.3 bits (70), Expect = 0.33
 Identities = 20/50 (40%), Positives = 30/50 (60%)
 Frame = -2

Query: 493 KFQLITFLLRLNITSSRFT*CNQLITFSNLLTSSYPLYIIFH*TEYVYNN 344
           K++LI F+ R NI S+ +  C+  +  S LLTS+  + I+FH T  V  N
Sbjct: 127 KWRLIEFI-RANIASNAYV-CSGFLENSPLLTSNQKVNILFHHTSLVIIN 174


>AL032635-3|CAB63374.1|  635|Caenorhabditis elegans Hypothetical
           protein Y51A2A.5 protein.
          Length = 635

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -1

Query: 617 FHWLFNLLFNEVQLVV 570
           FHWL N +FNE Q +V
Sbjct: 236 FHWLKNWIFNEFQFIV 251


>Z74046-4|CAC42385.1|  162|Caenorhabditis elegans Hypothetical
           protein C14C10.6 protein.
          Length = 162

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 24/84 (28%), Positives = 38/84 (45%)
 Frame = -1

Query: 317 ASSQLIAIMTVGRLHAMPISIQAILFVVFHFGLRSLVTTLFHALK*LDLNIK*ALRHVFT 138
           AS     +  + R HA+P+++  IL +V  F  R+    + H L    L+I  A+ H  T
Sbjct: 30  ASHYTSTLPALSRAHALPLALLCILRIVLIFDFRNFSIHIAHIL----LSILTAI-HTMT 84

Query: 137 NMVGTFSVNDDYVETRIDSVVLNS 66
            +   F  +  Y    +  V LNS
Sbjct: 85  EVF--FYQSMSYGIVTVTEVTLNS 106


>Z74028-9|CAC42259.1|  162|Caenorhabditis elegans Hypothetical
           protein C14C10.6 protein.
          Length = 162

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 24/84 (28%), Positives = 38/84 (45%)
 Frame = -1

Query: 317 ASSQLIAIMTVGRLHAMPISIQAILFVVFHFGLRSLVTTLFHALK*LDLNIK*ALRHVFT 138
           AS     +  + R HA+P+++  IL +V  F  R+    + H L    L+I  A+ H  T
Sbjct: 30  ASHYTSTLPALSRAHALPLALLCILRIVLIFDFRNFSIHIAHIL----LSILTAI-HTMT 84

Query: 137 NMVGTFSVNDDYVETRIDSVVLNS 66
            +   F  +  Y    +  V LNS
Sbjct: 85  EVF--FYQSMSYGIVTVTEVTLNS 106


>U21324-12|AAA62559.1|  227|Caenorhabditis elegans Hypothetical
           protein C35D10.3 protein.
          Length = 227

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 8/39 (20%), Positives = 23/39 (58%)
 Frame = +2

Query: 278 VCQPSLWQLIGCLPVSCL*KSSIIIHILCLMKNDI*WIR 394
           +C P+LW ++ C  ++ L    + +++ C  + ++ W++
Sbjct: 37  ICSPNLWMIVACTCMTLL-TMLMTLYMNCGFRRNVRWLK 74


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,600,997
Number of Sequences: 27780
Number of extensions: 298316
Number of successful extensions: 719
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)