Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23j13
         (681 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       24   1.2  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    24   1.2  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   4.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   4.7  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   4.7  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    21   8.2  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   8.2  

>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +2

Query: 560 VSKLFYSFLMIVLIINNT 613
           VS +FYS LMI+  I NT
Sbjct: 39  VSIVFYSVLMIISAIGNT 56


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +3

Query: 243 HFRVPQRLKANLSGNVLNQMVTSSTFEQ*DNSMCP 347
           H  V   + ANL+  V N+M   +T    D +M P
Sbjct: 143 HIPVSVLMGANLASEVANEMFCETTIGCKDKNMAP 177


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 160 Q*CGS*KQTYVKITRDPS 213
           Q CG+ K+ Y  ++RDP+
Sbjct: 399 QGCGAGKENYQTMSRDPA 416


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 160 Q*CGS*KQTYVKITRDPS 213
           Q CG+ K+ Y  ++RDP+
Sbjct: 399 QGCGAGKENYQTMSRDPA 416


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
 Frame = +3

Query: 147 YNSVTVMWFVKTNIRQNHSRSKSIVLRPRRPNHFR-VPQRLK--ANLSGNVLNQMVTSS 314
           Y++    W  KT++ +     KS   +PRR  HF+ + + +K  + L G  L++ + ++
Sbjct: 415 YDAQEPAW--KTHVWKKGRDKKSTSKKPRRKFHFKQIARAVKFTSKLFGRALSRRIKAT 471


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/46 (21%), Positives = 21/46 (45%)
 Frame = -3

Query: 442 KDRNHGTQQFHFAPASSITSFPTNNTHLTNYEGHIELSYCSNVDDV 305
           K+R+    +   +    I S  +NN + +NY  +     C N++ +
Sbjct: 64  KERSRDRTERERSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINHI 109


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 323 AIRQFNVSFIISQVSVVCWE 382
           A R+F  +  +  + +VCWE
Sbjct: 811 AFRKFTSASDVWSMGIVCWE 830


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,487
Number of Sequences: 438
Number of extensions: 4345
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)