Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23j12
(569 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 277 4e-75
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 277 4e-75
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 277 4e-75
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 275 2e-74
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 250 5e-67
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 250 7e-67
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 250 7e-67
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 248 2e-66
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 248 3e-66
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 248 3e-66
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 244 3e-65
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 244 3e-65
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 229 1e-60
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 228 2e-60
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 209 9e-55
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 186 7e-48
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 139 1e-33
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 137 5e-33
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 137 6e-33
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 136 8e-33
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 136 8e-33
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 134 4e-32
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 114 5e-26
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 114 5e-26
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 74 8e-14
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 74 8e-14
AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical ... 30 1.0
AC006722-1|AAK68420.1| 401|Caenorhabditis elegans Hypothetical ... 29 1.8
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 3.1
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 3.1
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 3.1
AC006645-6|AAF39847.1| 462|Caenorhabditis elegans Hypothetical ... 29 3.1
Z71265-3|CAA95835.2| 403|Caenorhabditis elegans Hypothetical pr... 28 4.1
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 5.4
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 5.4
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 5.4
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 5.4
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 5.4
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 5.4
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 5.4
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 5.4
Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical pr... 27 7.2
U53153-8|AAC69040.1| 428|Caenorhabditis elegans Nuclear hormone... 27 7.2
AY305833-1|AAR11978.1| 428|Caenorhabditis elegans nuclear recep... 27 7.2
AF273785-1|AAG15134.1| 423|Caenorhabditis elegans nuclear recep... 27 7.2
Z50070-12|CAA90398.2| 554|Caenorhabditis elegans Hypothetical p... 27 9.5
AL110487-7|CAB54431.1| 581|Caenorhabditis elegans Hypothetical ... 27 9.5
AL032651-3|CAB60582.1| 554|Caenorhabditis elegans Hypothetical ... 27 9.5
AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical... 27 9.5
AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gam... 27 9.5
AF099917-8|AAC68779.2| 457|Caenorhabditis elegans Hypothetical ... 27 9.5
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 277 bits (679), Expect = 4e-75
Identities = 124/157 (78%), Positives = 136/157 (86%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE ISIH GQAGVQIGNACWELYCLEHGIQPDGQMPSDK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
HVPRAV +DLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERL 568
R+R+LAD CTGLQGFL+ LLMERL
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERL 157
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 277 bits (679), Expect = 4e-75
Identities = 124/157 (78%), Positives = 136/157 (86%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE ISIH GQAGVQIGNACWELYCLEHGIQPDGQMPSDK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
HVPRAV +DLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERL 568
R+R+LAD CTGLQGFL+ LLMERL
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERL 157
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 277 bits (679), Expect = 4e-75
Identities = 124/157 (78%), Positives = 136/157 (86%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE ISIH GQAGVQIGNACWELYCLEHGIQPDGQMPSDK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
HVPRAV +DLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERL 568
R+R+LAD CTGLQGFL+ LLMERL
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERL 157
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 275 bits (674), Expect = 2e-74
Identities = 123/156 (78%), Positives = 135/156 (86%)
Frame = +2
Query: 101 RECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKH 280
RE ISIH GQAGVQIGNACWELYCLEHGIQPDGQMPSDK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 281 VPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 460
VPRAV +DLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDR
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 461 VRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERL 568
+R+LAD CTGLQGFL+ LLMERL
Sbjct: 121 IRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERL 156
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 250 bits (612), Expect = 5e-67
Identities = 111/159 (69%), Positives = 129/159 (81%)
Frame = +2
Query: 92 NKMRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGA 271
N+ RE ISIH GQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET A
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 272 GKHVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 451
GKHVPRA+ +DLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+V
Sbjct: 64 GKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVV 123
Query: 452 LDRVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERL 568
+DRVR+L + C GLQGFL+ LLMERL
Sbjct: 124 MDRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERL 162
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 250 bits (611), Expect = 7e-67
Identities = 111/157 (70%), Positives = 130/157 (82%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE ISIH GQAGVQIGNACWELYCLEHGIQPDG MPSD+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPR++F+DLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERL 568
R+R+LAD C+GLQGF + LLMERL
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERL 155
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 250 bits (611), Expect = 7e-67
Identities = 111/157 (70%), Positives = 130/157 (82%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE ISIH GQAGVQIGNACWELYCLEHGIQPDG MPSD+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPR++F+DLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERL 568
R+R+LAD C+GLQGF + LLMERL
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERL 155
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 248 bits (607), Expect = 2e-66
Identities = 111/157 (70%), Positives = 128/157 (81%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE +SIH GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
HVPRA+F+DLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++D+V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERL 568
RVR+L ++C LQGFLI L+MERL
Sbjct: 121 RVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERL 157
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 248 bits (606), Expect = 3e-66
Identities = 110/157 (70%), Positives = 130/157 (82%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE ISIH GQAGVQIGNACWELYCLEHGIQPDG MP+ T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPR++F+DLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERL 568
R+R+LAD C+GLQGF + LLMERL
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERL 155
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 248 bits (606), Expect = 3e-66
Identities = 110/157 (70%), Positives = 130/157 (82%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE ISIH GQAGVQIGNACWELYCLEHGIQPDG MP+ T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPR++F+DLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERL 568
R+R+LAD C+GLQGF + LLMERL
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERL 155
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 244 bits (598), Expect = 3e-65
Identities = 109/157 (69%), Positives = 128/157 (81%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE ISIH GQAGVQIGNACWELYCLEHGIQPDG MPS++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPR++F+DLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERL 568
R+R+LAD C+GLQGF + LLMERL
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERL 155
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 244 bits (598), Expect = 3e-65
Identities = 109/157 (69%), Positives = 128/157 (81%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE ISIH GQAGVQIGNACWELYCLEHGIQPDG MPS++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPR++F+DLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERL 568
R+R+LAD C+GLQGF + LLMERL
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERL 155
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 229 bits (560), Expect = 1e-60
Identities = 104/156 (66%), Positives = 121/156 (77%)
Frame = +2
Query: 101 RECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKH 280
RE ISIH GQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 281 VPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 460
VPR +F+DLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 461 VRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERL 568
V++LA+ C GLQGF+I LLMERL
Sbjct: 128 VKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERL 163
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 228 bits (557), Expect = 2e-60
Identities = 102/157 (64%), Positives = 120/157 (76%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE ISIH GQAGVQIGNACWELYCLEHGI PDG + G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
HVPR++F+DLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LD
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERL 568
R+R+LA+ C GLQGF + +LMERL
Sbjct: 118 RIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERL 154
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 209 bits (511), Expect = 9e-55
Identities = 93/156 (59%), Positives = 113/156 (72%)
Frame = +2
Query: 101 RECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKH 280
REC+SIH GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 281 VPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 460
VPRA+++DLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+VLDR
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 461 VRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERL 568
+RK + C GLQGFL+ LLMERL
Sbjct: 125 IRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERL 160
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 186 bits (454), Expect = 7e-48
Identities = 84/135 (62%), Positives = 102/135 (75%)
Frame = +2
Query: 164 LYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFIDLEPTVVDEVRTGT 343
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +F+DLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 344 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRVRKLADQCTGLQGFLIXXXXX 523
YR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DRV++LA+ C GLQGF+I
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFG 120
Query: 524 XXXXXXXXXLLMERL 568
LLMERL
Sbjct: 121 GGTGSGFLSLLMERL 135
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 139 bits (336), Expect = 1e-33
Identities = 66/135 (48%), Positives = 87/135 (64%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE + + AGQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPRAV +DLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 458 RVRKLADQCTGLQGF 502
VRK A+ C LQGF
Sbjct: 119 VVRKEAEGCDCLQGF 133
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 137 bits (332), Expect = 5e-33
Identities = 64/135 (47%), Positives = 88/135 (65%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE + + AGQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPRAV +DLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 458 RVRKLADQCTGLQGF 502
+RK A+ C LQGF
Sbjct: 119 VIRKEAEGCDCLQGF 133
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 137 bits (331), Expect = 6e-33
Identities = 64/135 (47%), Positives = 88/135 (65%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE + + AGQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPRAV +DLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 458 RVRKLADQCTGLQGF 502
+RK A+ C LQGF
Sbjct: 119 VIRKEAEGCDCLQGF 133
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 136 bits (330), Expect = 8e-33
Identities = 66/135 (48%), Positives = 87/135 (64%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE + I AGQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPRAV +DLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 458 RVRKLADQCTGLQGF 502
VRK A+ LQGF
Sbjct: 119 VVRKEAESTDCLQGF 133
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 136 bits (330), Expect = 8e-33
Identities = 66/135 (48%), Positives = 87/135 (64%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE + I AGQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPRAV +DLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 458 RVRKLADQCTGLQGF 502
VRK A+ LQGF
Sbjct: 119 VVRKEAESTDCLQGF 133
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 134 bits (324), Expect = 4e-32
Identities = 65/135 (48%), Positives = 83/135 (61%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
MRE + I AGQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPRA +DLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 458 RVRKLADQCTGLQGF 502
VRK A+ C LQGF
Sbjct: 119 VVRKEAESCDCLQGF 133
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 114 bits (274), Expect = 5e-26
Identities = 57/157 (36%), Positives = 86/157 (54%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
M+E I++ GQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPRA+ +DL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERL 568
+R+ A+ L+GF + LL+ +L
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKL 155
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 114 bits (274), Expect = 5e-26
Identities = 57/157 (36%), Positives = 86/157 (54%)
Frame = +2
Query: 98 MRECISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK 277
M+E I++ GQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 278 HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 457
+VPRA+ +DL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 458 RVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERL 568
+R+ A+ L+GF + LL+ +L
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKL 155
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 73.7 bits (173), Expect = 8e-14
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 3/156 (1%)
Frame = +2
Query: 110 ISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPR 289
+++H GQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 290 AVFIDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 460
AV +DLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 461 VRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERL 568
+ + A+ L G L LL+ERL
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERL 159
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 73.7 bits (173), Expect = 8e-14
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 3/156 (1%)
Frame = +2
Query: 110 ISIHAGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPR 289
+++H GQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 290 AVFIDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 460
AV +DLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 461 VRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERL 568
+ + A+ L G L LL+ERL
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERL 159
>AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical
protein Y32F6A.3 protein.
Length = 655
Score = 30.3 bits (65), Expect = 1.0
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = -3
Query: 273 PAPVSLKNVLKESSPPPTVLSEGICPSGWMPCSRQYSSQHALPICTPAWPAWIDMHS 103
P PV L + + + PT +C W P + H +PI TPA+P H+
Sbjct: 273 PHPVVLNEMNNDRNDIPT-----LCELVWDPRRKNTDRFHVMPIITPAFPEQNSTHN 324
>AC006722-1|AAK68420.1| 401|Caenorhabditis elegans Hypothetical
protein Y19D10A.7 protein.
Length = 401
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -3
Query: 180 CSRQYSSQHALPICTPAWPAWIDMHSRI-LFYFNINSSNYTNFYFEKTLLQLDCRPNLKK 4
CS + + + I P + W D H+ I L N+ S +N YF + ++L PNLK
Sbjct: 116 CSTKSRLKPPVDIIEPQF-MWGDNHNMINLGLVNLTSIGCSNIYFLRNTVRLLNLPNLKN 174
Query: 3 I 1
I
Sbjct: 175 I 175
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +2
Query: 140 QIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFIDLEPTV 319
QI +C CL +G++P G P + G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 320 VDE 328
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +2
Query: 140 QIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFIDLEPTV 319
QI +C CL +G++P G P + G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 320 VDE 328
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +2
Query: 140 QIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFIDLEPTV 319
QI +C CL +G++P G P + G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 320 VDE 328
DE
Sbjct: 116 ADE 118
>AC006645-6|AAF39847.1| 462|Caenorhabditis elegans Hypothetical
protein F56A4.9 protein.
Length = 462
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -3
Query: 180 CSRQYSSQHALPICTPAWPAWIDMHSRI-LFYFNINSSNYTNFYFEKTLLQLDCRPNLKK 4
CS + + + I P + W D H+ I L N+ S +N YF + ++L PNLK
Sbjct: 116 CSTKSRLKPPVDIIEPQF-MWGDNHNMINLGLVNLTSIGCSNIYFLRNTVRLLNLPNLKV 174
Query: 3 I 1
I
Sbjct: 175 I 175
>Z71265-3|CAA95835.2| 403|Caenorhabditis elegans Hypothetical
protein M05B5.3 protein.
Length = 403
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3
Query: 567 RRSIRSDAKPDPVPPPN 517
R SI SDA P+P PPP+
Sbjct: 216 RVSIESDAPPNPAPPPS 232
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 317 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 460
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 317 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 460
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 317 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 460
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 317 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 460
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 317 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 460
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 317 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 460
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 317 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 460
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 317 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 460
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
>Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical
protein R166.5a protein.
Length = 705
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 173 LEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFIDLE 310
L H Q D +P++ VGGG +F+ + +HV + F D E
Sbjct: 29 LNHLGQVDN-IPNNSAVGGGGAAFHHLHTSAATPRHVATSEFYDDE 73
>U53153-8|AAC69040.1| 428|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 44 protein.
Length = 428
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 248 TFFSETGAGKHVPRAVFIDLEPTVVD 325
T ++ TG+GK++ F DL P + D
Sbjct: 136 TTYTSTGSGKNIEYITFFDLTPIIKD 161
>AY305833-1|AAR11978.1| 428|Caenorhabditis elegans nuclear receptor
NHR-44 protein.
Length = 428
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 248 TFFSETGAGKHVPRAVFIDLEPTVVD 325
T ++ TG+GK++ F DL P + D
Sbjct: 136 TTYTSTGSGKNIEYITFFDLTPIIKD 161
>AF273785-1|AAG15134.1| 423|Caenorhabditis elegans nuclear receptor
NHR-44 protein.
Length = 423
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 248 TFFSETGAGKHVPRAVFIDLEPTVVD 325
T ++ TG+GK++ F DL P + D
Sbjct: 131 TTYTSTGSGKNIEYITFFDLTPIIKD 156
>Z50070-12|CAA90398.2| 554|Caenorhabditis elegans Hypothetical
protein F43G6.5 protein.
Length = 554
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -3
Query: 189 WMPCSRQYSSQHALPICTPAWPAWIDMHS 103
W P Q H +PI TPA+P H+
Sbjct: 303 WDPRRNQSDRYHLMPIVTPAFPQQNSTHN 331
>AL110487-7|CAB54431.1| 581|Caenorhabditis elegans Hypothetical
protein Y39E4B.10 protein.
Length = 581
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = -2
Query: 304 IYEYCSRNMFTGS-C----FAEECVEGIVSAADGFVRGHLPVWLDAMFETIQLPTRVA 146
I+ + +N++T + C F E+ +E I + L W++A + IQ+PT+++
Sbjct: 374 IFNFLIKNLYTNAICDSEMFGEDGMEVIPHTVGDSTKFILLFWVEAYLQKIQIPTQMS 431
>AL032651-3|CAB60582.1| 554|Caenorhabditis elegans Hypothetical
protein F43G6.5 protein.
Length = 554
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -3
Query: 189 WMPCSRQYSSQHALPICTPAWPAWIDMHS 103
W P Q H +PI TPA+P H+
Sbjct: 303 WDPRRNQSDRYHLMPIVTPAFPQQNSTHN 331
>AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical
protein Y39A1A.15b protein.
Length = 951
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -2
Query: 325 IHYCWF*IYEYCSRNMFTGSCFA--EECVEGIVSAADGFVRGH 203
+H C + IY+ N+ C A E+ E IVS D FV H
Sbjct: 28 VHPCIYQIYDLL--NLLPDGCHAISEQIREQIVSVEDAFVNSH 68
>AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gamma
1A protein.
Length = 952
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -2
Query: 325 IHYCWF*IYEYCSRNMFTGSCFA--EECVEGIVSAADGFVRGH 203
+H C + IY+ N+ C A E+ E IVS D FV H
Sbjct: 28 VHPCIYQIYDLL--NLLPDGCHAISEQIREQIVSVEDAFVNSH 68
>AF099917-8|AAC68779.2| 457|Caenorhabditis elegans Hypothetical
protein F54D10.8 protein.
Length = 457
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +3
Query: 138 CKSATRVGSCIVSNMASNQTGRCPRTKPSAAETIPSTHSSAKQEPVNMFLEQY 296
CK +GS S + CPR + ++ S +S+ EPV + + Y
Sbjct: 114 CKRRELLGSAYESVVFPESVVHCPRRAGAEFVSVSSGFNSSTPEPVRLSFKAY 166
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,418,542
Number of Sequences: 27780
Number of extensions: 286529
Number of successful extensions: 904
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -