Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23j11
         (318 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   4.7  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    20   6.3  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          20   8.3  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      20   8.3  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    20   8.3  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    20   8.3  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 274 WVHGLNQK*MKSKKK 318
           W+ GLN++  K  KK
Sbjct: 424 WIAGLNEENFKDAKK 438


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 11/49 (22%), Positives = 20/49 (40%)
 Frame = -3

Query: 241 RPDDSFILIVQCRFSLTVMSRINLNFTNIEYF*YYVRYVDHFK*CKNSK 95
           R ++ +I IV  ++       +N N  N       V  +  +  C+N K
Sbjct: 367 RQNNEYIWIVSNKYQKIANGDLNFNEVNFRILNAPVNQLIRYTRCENPK 415


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 61  LNYTVIYAQFYFYYFYTI*NDLHTE 135
           LN+  I  +FYF+    + N  + E
Sbjct: 248 LNFPQIRGEFYFFLHKQVLNRYYLE 272


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 61  LNYTVIYAQFYFYYFYTI*NDLHTE 135
           LN+  I  +FYF+    + N  + E
Sbjct: 248 LNFPQIRGEFYFFLHKQVLNRYYLE 272


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +3

Query: 51  FVLFKLYCYIRSVLFLLFLHYLK*STYRT*YQKY 152
           F+   LYC+ R    + F + +  +     YQ+Y
Sbjct: 2   FLNGSLYCFARLFFIIGFFNAISGAIKGNDYQRY 35


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 85  QFYFYYFYTI*NDLH 129
           QFYF+ FY    DL+
Sbjct: 188 QFYFHQFYKQQPDLN 202


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,160
Number of Sequences: 438
Number of extensions: 1306
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6844365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)