Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23j09
(599 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 221 4e-58
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 221 4e-58
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 221 4e-58
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 221 4e-58
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 217 7e-57
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 215 2e-56
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 215 3e-56
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 215 3e-56
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 215 3e-56
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 215 3e-56
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 213 6e-56
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 213 6e-56
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 213 6e-56
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 213 1e-55
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 207 5e-54
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 207 5e-54
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 118 2e-27
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 79 2e-15
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 78 4e-15
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 77 1e-14
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 77 1e-14
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 75 5e-14
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 74 7e-14
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 46 2e-05
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 46 2e-05
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 31 0.63
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 31 0.63
U41556-9|AAK39192.1| 692|Caenorhabditis elegans Potassium chann... 30 1.5
U41556-8|AAM51518.1| 740|Caenorhabditis elegans Potassium chann... 30 1.5
AY572974-1|AAT77227.1| 692|Caenorhabditis elegans KQT-1 potassi... 30 1.5
U39648-3|AAM15603.1| 434|Caenorhabditis elegans Hypothetical pr... 28 4.4
AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain (... 28 4.4
Z73969-20|CAA98241.1| 643|Caenorhabditis elegans Hypothetical p... 27 7.7
U41270-2|AAA82440.1| 298|Caenorhabditis elegans Cell-death-rela... 27 7.7
U21487-1|AAA96949.1| 643|Caenorhabditis elegans ribonucleoprote... 27 7.7
L41729-1|AAC41575.1| 643|Caenorhabditis elegans Ro ribonucleopr... 27 7.7
AY303578-1|AAP57300.1| 298|Caenorhabditis elegans cell death-re... 27 7.7
AL021479-8|CAA16325.1| 643|Caenorhabditis elegans Hypothetical ... 27 7.7
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 221 bits (539), Expect = 4e-58
Identities = 100/130 (76%), Positives = 113/130 (86%)
Frame = +1
Query: 1 RGDVVPKDVNAAIAAMKGRAGIRFVDWCPTGFKVGINYQPPSVVTGGDLAQVKRAASMLS 180
RGDVVPKDVNAAIA +K + I+FVDWCPTGFKVGINYQPP+VV GGDLA+V RA MLS
Sbjct: 320 RGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLS 379
Query: 181 NTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIET 360
NTTAIAEAW +LDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DY+EV +++
Sbjct: 380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 439
Query: 361 SDMQPGADDE 390
+ DE
Sbjct: 440 MEDNGEEGDE 449
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 221 bits (539), Expect = 4e-58
Identities = 100/130 (76%), Positives = 113/130 (86%)
Frame = +1
Query: 1 RGDVVPKDVNAAIAAMKGRAGIRFVDWCPTGFKVGINYQPPSVVTGGDLAQVKRAASMLS 180
RGDVVPKDVNAAIA +K + I+FVDWCPTGFKVGINYQPP+VV GGDLA+V RA MLS
Sbjct: 319 RGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLS 378
Query: 181 NTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIET 360
NTTAIAEAW +LDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DY+EV +++
Sbjct: 379 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 438
Query: 361 SDMQPGADDE 390
+ DE
Sbjct: 439 MEDNGEEGDE 448
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 221 bits (539), Expect = 4e-58
Identities = 100/130 (76%), Positives = 113/130 (86%)
Frame = +1
Query: 1 RGDVVPKDVNAAIAAMKGRAGIRFVDWCPTGFKVGINYQPPSVVTGGDLAQVKRAASMLS 180
RGDVVPKDVNAAIA +K + I+FVDWCPTGFKVGINYQPP+VV GGDLA+V RA MLS
Sbjct: 320 RGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLS 379
Query: 181 NTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIET 360
NTTAIAEAW +LDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DY+EV +++
Sbjct: 380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 439
Query: 361 SDMQPGADDE 390
+ DE
Sbjct: 440 MEDNGEEGDE 449
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 221 bits (539), Expect = 4e-58
Identities = 100/130 (76%), Positives = 113/130 (86%)
Frame = +1
Query: 1 RGDVVPKDVNAAIAAMKGRAGIRFVDWCPTGFKVGINYQPPSVVTGGDLAQVKRAASMLS 180
RGDVVPKDVNAAIA +K + I+FVDWCPTGFKVGINYQPP+VV GGDLA+V RA MLS
Sbjct: 320 RGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLS 379
Query: 181 NTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIET 360
NTTAIAEAW +LDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DY+EV +++
Sbjct: 380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 439
Query: 361 SDMQPGADDE 390
+ DE
Sbjct: 440 MEDNGEEGDE 449
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 217 bits (529), Expect = 7e-57
Identities = 97/130 (74%), Positives = 115/130 (88%)
Frame = +1
Query: 1 RGDVVPKDVNAAIAAMKGRAGIRFVDWCPTGFKVGINYQPPSVVTGGDLAQVKRAASMLS 180
RGDVVPKDVNAAIA++K + I+FVDWCPTGFKVGINYQPP+VV G DL++++RA MLS
Sbjct: 325 RGDVVPKDVNAAIASVKTKRSIQFVDWCPTGFKVGINYQPPTVVPGADLSKLQRAVCMLS 384
Query: 181 NTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIET 360
NTTAIAEAW +LDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DY+EV ++
Sbjct: 385 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGLDA 444
Query: 361 SDMQPGADDE 390
+P +D+
Sbjct: 445 G--EPDEEDD 452
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 215 bits (526), Expect = 2e-56
Identities = 97/129 (75%), Positives = 112/129 (86%)
Frame = +1
Query: 1 RGDVVPKDVNAAIAAMKGRAGIRFVDWCPTGFKVGINYQPPSVVTGGDLAQVKRAASMLS 180
RGDVVPKDVNAAI+++K + GI FVDWCPTGFKVGINYQ P V GGDLA+V RA MLS
Sbjct: 323 RGDVVPKDVNAAISSVKAKRGINFVDWCPTGFKVGINYQAPITVEGGDLAKVHRAVCMLS 382
Query: 181 NTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIET 360
NTTAIAEAW +LDHKFDLMYSKRAFVHW+VGEGMEEGEF EAR+DLAALE+DY EV+ +T
Sbjct: 383 NTTAIAEAWARLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAALEKDYAEVSRDT 442
Query: 361 SDMQPGADD 387
+D++ D+
Sbjct: 443 ADLEEENDE 451
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 215 bits (524), Expect = 3e-56
Identities = 96/122 (78%), Positives = 111/122 (90%)
Frame = +1
Query: 1 RGDVVPKDVNAAIAAMKGRAGIRFVDWCPTGFKVGINYQPPSVVTGGDLAQVKRAASMLS 180
RGDVVPKDVN AIAA+K + I+FVDWCPTGFKVGINYQPP+VV GGDLA+V RA MLS
Sbjct: 318 RGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLS 377
Query: 181 NTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIET 360
NTTAIAEAW +LD+KFDLMY+KRAFVHWYVGEGMEEGEF+EAREDLAALE+DY+EV ++
Sbjct: 378 NTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADS 437
Query: 361 SD 366
++
Sbjct: 438 NE 439
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 215 bits (524), Expect = 3e-56
Identities = 96/122 (78%), Positives = 111/122 (90%)
Frame = +1
Query: 1 RGDVVPKDVNAAIAAMKGRAGIRFVDWCPTGFKVGINYQPPSVVTGGDLAQVKRAASMLS 180
RGDVVPKDVN AIAA+K + I+FVDWCPTGFKVGINYQPP+VV GGDLA+V RA MLS
Sbjct: 318 RGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLS 377
Query: 181 NTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIET 360
NTTAIAEAW +LD+KFDLMY+KRAFVHWYVGEGMEEGEF+EAREDLAALE+DY+EV ++
Sbjct: 378 NTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADS 437
Query: 361 SD 366
++
Sbjct: 438 NE 439
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 215 bits (524), Expect = 3e-56
Identities = 96/122 (78%), Positives = 111/122 (90%)
Frame = +1
Query: 1 RGDVVPKDVNAAIAAMKGRAGIRFVDWCPTGFKVGINYQPPSVVTGGDLAQVKRAASMLS 180
RGDVVPKDVN AIAA+K + I+FVDWCPTGFKVGINYQPP+VV GGDLA+V RA MLS
Sbjct: 318 RGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLS 377
Query: 181 NTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIET 360
NTTAIAEAW +LD+KFDLMY+KRAFVHWYVGEGMEEGEF+EAREDLAALE+DY+EV ++
Sbjct: 378 NTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADS 437
Query: 361 SD 366
++
Sbjct: 438 NE 439
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 215 bits (524), Expect = 3e-56
Identities = 96/122 (78%), Positives = 111/122 (90%)
Frame = +1
Query: 1 RGDVVPKDVNAAIAAMKGRAGIRFVDWCPTGFKVGINYQPPSVVTGGDLAQVKRAASMLS 180
RGDVVPKDVN AIAA+K + I+FVDWCPTGFKVGINYQPP+VV GGDLA+V RA MLS
Sbjct: 318 RGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLS 377
Query: 181 NTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIET 360
NTTAIAEAW +LD+KFDLMY+KRAFVHWYVGEGMEEGEF+EAREDLAALE+DY+EV ++
Sbjct: 378 NTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADS 437
Query: 361 SD 366
++
Sbjct: 438 NE 439
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 213 bits (521), Expect = 6e-56
Identities = 96/130 (73%), Positives = 113/130 (86%)
Frame = +1
Query: 1 RGDVVPKDVNAAIAAMKGRAGIRFVDWCPTGFKVGINYQPPSVVTGGDLAQVKRAASMLS 180
RGDVVPKDV+AAI ++K + ++FVDWCPTGFKVG+NYQPP+V+ GGD+A+V RA MLS
Sbjct: 315 RGDVVPKDVSAAIKSIKTQRSVQFVDWCPTGFKVGLNYQPPTVIPGGDMAKVPRAVCMLS 374
Query: 181 NTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIET 360
NTTAIAEAW +LD+KFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DY+EV +
Sbjct: 375 NTTAIAEAWQRLDYKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAD- 433
Query: 361 SDMQPGADDE 390
SD DDE
Sbjct: 434 SDANDNGDDE 443
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 213 bits (521), Expect = 6e-56
Identities = 94/122 (77%), Positives = 110/122 (90%)
Frame = +1
Query: 1 RGDVVPKDVNAAIAAMKGRAGIRFVDWCPTGFKVGINYQPPSVVTGGDLAQVKRAASMLS 180
RGDVVPKDVN AI A+K + ++FVDWCPTGFKVGINYQPP+VV GGDLA+V RA MLS
Sbjct: 318 RGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLS 377
Query: 181 NTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIET 360
NTTAIAEAW +LD+KFDLMY+KRAFVHWYVGEGMEEGEF+EAREDLAALE+DY+EV ++
Sbjct: 378 NTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADS 437
Query: 361 SD 366
++
Sbjct: 438 NE 439
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 213 bits (521), Expect = 6e-56
Identities = 94/122 (77%), Positives = 110/122 (90%)
Frame = +1
Query: 1 RGDVVPKDVNAAIAAMKGRAGIRFVDWCPTGFKVGINYQPPSVVTGGDLAQVKRAASMLS 180
RGDVVPKDVN AI A+K + ++FVDWCPTGFKVGINYQPP+VV GGDLA+V RA MLS
Sbjct: 318 RGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLS 377
Query: 181 NTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIET 360
NTTAIAEAW +LD+KFDLMY+KRAFVHWYVGEGMEEGEF+EAREDLAALE+DY+EV ++
Sbjct: 378 NTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADS 437
Query: 361 SD 366
++
Sbjct: 438 NE 439
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 213 bits (519), Expect = 1e-55
Identities = 91/122 (74%), Positives = 111/122 (90%)
Frame = +1
Query: 1 RGDVVPKDVNAAIAAMKGRAGIRFVDWCPTGFKVGINYQPPSVVTGGDLAQVKRAASMLS 180
RGDVVPK++N+AI+ +K + I+FVDWCPTGFKVGINYQPP+VV GGD+A+++RA MLS
Sbjct: 320 RGDVVPKEINSAISTIKTKRAIQFVDWCPTGFKVGINYQPPTVVPGGDMAKLQRAVCMLS 379
Query: 181 NTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIET 360
NTTAI EAW +LDHKFDLMY+KRAFVHWYVGEGMEEGEFSEARED+AALE+DY+EV +++
Sbjct: 380 NTTAIQEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDS 439
Query: 361 SD 366
D
Sbjct: 440 FD 441
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 207 bits (505), Expect = 5e-54
Identities = 89/116 (76%), Positives = 106/116 (91%)
Frame = +1
Query: 1 RGDVVPKDVNAAIAAMKGRAGIRFVDWCPTGFKVGINYQPPSVVTGGDLAQVKRAASMLS 180
RGDVVPKD+N+AIAA+K + ++FV+WCPTGFKVGINYQPP+VV GGDL + R+ M+S
Sbjct: 326 RGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMIS 385
Query: 181 NTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEV 348
NTTAIAEAW +LDHKFDLMY+KRAFVHWYVGEGMEEGEFSEARED+AALE+DY+E+
Sbjct: 386 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEI 441
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 207 bits (505), Expect = 5e-54
Identities = 89/116 (76%), Positives = 106/116 (91%)
Frame = +1
Query: 1 RGDVVPKDVNAAIAAMKGRAGIRFVDWCPTGFKVGINYQPPSVVTGGDLAQVKRAASMLS 180
RGDVVPKD+N+AIAA+K + ++FV+WCPTGFKVGINYQPP+VV GGDL + R+ M+S
Sbjct: 298 RGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMIS 357
Query: 181 NTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEV 348
NTTAIAEAW +LDHKFDLMY+KRAFVHWYVGEGMEEGEFSEARED+AALE+DY+E+
Sbjct: 358 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEI 413
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 118 bits (285), Expect = 2e-27
Identities = 51/65 (78%), Positives = 62/65 (95%)
Frame = +1
Query: 172 MLSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVA 351
MLS+TTAIAEAW +LD+KFDLMY+KRAFVHWYVGEGMEEGEF+EAREDLAALE+DY+EV
Sbjct: 12 MLSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVG 71
Query: 352 IETSD 366
++++
Sbjct: 72 ADSNE 76
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 79.4 bits (187), Expect = 2e-15
Identities = 41/129 (31%), Positives = 70/129 (54%)
Frame = +1
Query: 1 RGDVVPKDVNAAIAAMKGRAGIRFVDWCPTGFKVGINYQPPSVVTGGDLAQVKRAASMLS 180
RG + K+V+ + ++ + FV+W P K + PP VK AA+ +
Sbjct: 318 RGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR--------GVKMAATFVG 369
Query: 181 NTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIET 360
N+TAI E + ++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y + T
Sbjct: 370 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAT 429
Query: 361 SDMQPGADD 387
+D + D+
Sbjct: 430 ADDEGEFDE 438
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 78.2 bits (184), Expect = 4e-15
Identities = 38/125 (30%), Positives = 70/125 (56%)
Frame = +1
Query: 1 RGDVVPKDVNAAIAAMKGRAGIRFVDWCPTGFKVGINYQPPSVVTGGDLAQVKRAASMLS 180
RG + ++V+ + +++ + FV+W P K + PP +K AA+ +
Sbjct: 318 RGRMSMREVDEQMLSVQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATFVG 369
Query: 181 NTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIET 360
N+TAI E + ++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y + T
Sbjct: 370 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEAT 429
Query: 361 SDMQP 375
++ +P
Sbjct: 430 AEDEP 434
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 76.6 bits (180), Expect = 1e-14
Identities = 38/122 (31%), Positives = 66/122 (54%)
Frame = +1
Query: 1 RGDVVPKDVNAAIAAMKGRAGIRFVDWCPTGFKVGINYQPPSVVTGGDLAQVKRAASMLS 180
RG + K+V+ + ++ + FVDW P K + PP +K +A+ +
Sbjct: 318 RGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPR--------GLKMSATFIG 369
Query: 181 NTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIET 360
N+TAI E + ++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y +
Sbjct: 370 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAA 429
Query: 361 SD 366
+D
Sbjct: 430 AD 431
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 76.6 bits (180), Expect = 1e-14
Identities = 38/122 (31%), Positives = 66/122 (54%)
Frame = +1
Query: 1 RGDVVPKDVNAAIAAMKGRAGIRFVDWCPTGFKVGINYQPPSVVTGGDLAQVKRAASMLS 180
RG + K+V+ + ++ + FVDW P K + PP +K +A+ +
Sbjct: 318 RGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPR--------GLKMSATFIG 369
Query: 181 NTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIET 360
N+TAI E + ++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y +
Sbjct: 370 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAA 429
Query: 361 SD 366
+D
Sbjct: 430 AD 431
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 74.5 bits (175), Expect = 5e-14
Identities = 37/122 (30%), Positives = 67/122 (54%)
Frame = +1
Query: 1 RGDVVPKDVNAAIAAMKGRAGIRFVDWCPTGFKVGINYQPPSVVTGGDLAQVKRAASMLS 180
RG + ++V+ + ++ + FV+W P K + PP +K AA+ +
Sbjct: 318 RGRMSMREVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMAATFVG 369
Query: 181 NTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIET 360
N+TAI E + ++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y + T
Sbjct: 370 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEAT 429
Query: 361 SD 366
++
Sbjct: 430 AE 431
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 74.1 bits (174), Expect = 7e-14
Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 3/133 (2%)
Frame = +1
Query: 1 RGDVVPKDVNAAIAAMKGRAGIRFVDWCPTGFKVGINYQPPSVVTGGDLAQVKRAASMLS 180
RG + ++V+ + ++ + FV+W P K + PP +K +A+ +
Sbjct: 318 RGRMSMREVDDQMMNVQNKNSSYFVEWIPNNVKTAVCDIPPR--------GLKMSATFIG 369
Query: 181 NTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAR---EDLAALERDYDEVA 351
N+TAI E + ++ +F M+ ++AF+HWY GEGM+E EF+EA DL + + Y E
Sbjct: 370 NSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAT 429
Query: 352 IETSDMQPGADDE 390
E G D +
Sbjct: 430 AEEDGELDGTDGD 442
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/68 (33%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Frame = +1
Query: 154 VKRAASMLSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAR---EDLAA 324
+K +A+ ++N+TAI E ++ +F ++ ++AF+HWY MEE EF++A DL +
Sbjct: 359 LKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLIS 415
Query: 325 LERDYDEV 348
+ Y++V
Sbjct: 416 EFQQYEKV 423
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/68 (33%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Frame = +1
Query: 154 VKRAASMLSNTTAIAEAWGKLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAR---EDLAA 324
+K +A+ ++N+TAI E ++ +F ++ ++AF+HWY MEE EF++A DL +
Sbjct: 359 LKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLIS 415
Query: 325 LERDYDEV 348
+ Y++V
Sbjct: 416 EFQQYEKV 423
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 31.1 bits (67), Expect = 0.63
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 151 QVKRAASMLSNTTAIAEAWGKLDHKFDLMYSKRAFV 258
Q K + +L+N+T++A + L K+D + SKRAF+
Sbjct: 368 QYKVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAFI 403
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 31.1 bits (67), Expect = 0.63
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 151 QVKRAASMLSNTTAIAEAWGKLDHKFDLMYSKRAFV 258
Q K + +L+N+T++A + L K+D + SKRAF+
Sbjct: 368 QYKVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAFI 403
>U41556-9|AAK39192.1| 692|Caenorhabditis elegans Potassium channel,
kvqlt familyprotein 1, isoform a protein.
Length = 692
Score = 29.9 bits (64), Expect = 1.5
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
Frame = +1
Query: 130 VTGGDLAQVKRAASMLSNTTAIAEAWGKLDHKFDLM----YSKRAFVHWYVGEGMEEGEF 297
+ G ++ +++ SM + + GK+D K DLM ++A + GEF
Sbjct: 561 ICGKNIEKIEPKISMFTRIATLETTVGKMDKKLDLMVEMLMGRQASQRVFSQNTSPRGEF 620
Query: 298 SE---AREDLAALER 333
SE AR+DL R
Sbjct: 621 SEPTSARQDLTRSRR 635
>U41556-8|AAM51518.1| 740|Caenorhabditis elegans Potassium channel,
kvqlt familyprotein 1, isoform b protein.
Length = 740
Score = 29.9 bits (64), Expect = 1.5
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
Frame = +1
Query: 130 VTGGDLAQVKRAASMLSNTTAIAEAWGKLDHKFDLM----YSKRAFVHWYVGEGMEEGEF 297
+ G ++ +++ SM + + GK+D K DLM ++A + GEF
Sbjct: 609 ICGKNIEKIEPKISMFTRIATLETTVGKMDKKLDLMVEMLMGRQASQRVFSQNTSPRGEF 668
Query: 298 SE---AREDLAALER 333
SE AR+DL R
Sbjct: 669 SEPTSARQDLTRSRR 683
>AY572974-1|AAT77227.1| 692|Caenorhabditis elegans KQT-1 potassium
channel protein.
Length = 692
Score = 29.9 bits (64), Expect = 1.5
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
Frame = +1
Query: 130 VTGGDLAQVKRAASMLSNTTAIAEAWGKLDHKFDLM----YSKRAFVHWYVGEGMEEGEF 297
+ G ++ +++ SM + + GK+D K DLM ++A + GEF
Sbjct: 561 ICGKNIEKIEPKISMFTRIATLETTVGKMDKKLDLMVEMLMGRQASQRVFSQNTSPRGEF 620
Query: 298 SE---AREDLAALER 333
SE AR+DL R
Sbjct: 621 SEPTSARQDLTRSRR 635
>U39648-3|AAM15603.1| 434|Caenorhabditis elegans Hypothetical
protein T13C5.2 protein.
Length = 434
Score = 28.3 bits (60), Expect = 4.4
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +1
Query: 73 VDWCPTGFKVGINY 114
+DWCP +VG+NY
Sbjct: 341 IDWCPQAAEVGVNY 354
>AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 5
protein.
Length = 1434
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -1
Query: 509 KYRINNFKSKAHSSSSDFVTRDKYTIAKVQIELSYKNDHNSSSAPGC 369
KYR + + S + + D+Y + Q E S K +HN+ AP C
Sbjct: 396 KYRKTSVSADP-KSHTPILMADEYKEPQKQGEFSSKKNHNTHQAPAC 441
>Z73969-20|CAA98241.1| 643|Caenorhabditis elegans Hypothetical
protein C12D8.11 protein.
Length = 643
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -3
Query: 285 LHPFAYIPMHKSSLGIHEVELVVKLAPGLRYS 190
+HPF I ++ + GIH+ +++V YS
Sbjct: 581 IHPFEAIKKYREASGIHDAKVIVMAMQAYDYS 612
>U41270-2|AAA82440.1| 298|Caenorhabditis elegans Cell-death-related
nuclease protein4 protein.
Length = 298
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Frame = +1
Query: 226 FDLMYSKRAFVHWYVGEGMEEGEFS---EAREDL 318
FD++Y + F W + G+EEG+F+ ++R+DL
Sbjct: 85 FDVVYEQ--FQQWLITLGLEEGKFAFVCDSRQDL 116
>U21487-1|AAA96949.1| 643|Caenorhabditis elegans ribonucleoprotein
Ro autoantigenhomolog protein.
Length = 643
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -3
Query: 285 LHPFAYIPMHKSSLGIHEVELVVKLAPGLRYS 190
+HPF I ++ + GIH+ +++V YS
Sbjct: 581 IHPFEAIKKYREASGIHDAKVIVMAMQAYDYS 612
>L41729-1|AAC41575.1| 643|Caenorhabditis elegans Ro
ribonucleoprotein autoantigen protein.
Length = 643
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -3
Query: 285 LHPFAYIPMHKSSLGIHEVELVVKLAPGLRYS 190
+HPF I ++ + GIH+ +++V YS
Sbjct: 581 IHPFEAIKKYREASGIHDAKVIVMAMQAYDYS 612
>AY303578-1|AAP57300.1| 298|Caenorhabditis elegans cell
death-related nuclease 4 protein.
Length = 298
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Frame = +1
Query: 226 FDLMYSKRAFVHWYVGEGMEEGEFS---EAREDL 318
FD++Y + F W + G+EEG+F+ ++R+DL
Sbjct: 85 FDVVYEQ--FQQWLITLGLEEGKFAFVCDSRQDL 116
>AL021479-8|CAA16325.1| 643|Caenorhabditis elegans Hypothetical
protein C12D8.11 protein.
Length = 643
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -3
Query: 285 LHPFAYIPMHKSSLGIHEVELVVKLAPGLRYS 190
+HPF I ++ + GIH+ +++V YS
Sbjct: 581 IHPFEAIKKYREASGIHDAKVIVMAMQAYDYS 612
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,710,800
Number of Sequences: 27780
Number of extensions: 298689
Number of successful extensions: 831
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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