Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23j09
         (599 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   2.3  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   4.0  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   4.0  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   4.0  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   7.0  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   9.2  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +1

Query: 139 GDLAQVKRAASMLSNTTAIAEAWGKLDHKFD 231
           G + +   +   L+NT  +   W  LD+ FD
Sbjct: 20  GGVVRENSSGKNLTNTLNVIHKWKYLDYDFD 50


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 549 C*PWTALXVCLCTKSV 596
           C  W +L + LCT S+
Sbjct: 111 CDSWVSLDILLCTASI 126


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 227 STSCIPSELLC 259
           S SC+P E+LC
Sbjct: 433 SESCLPEEILC 443


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 16/59 (27%), Positives = 23/59 (38%)
 Frame = -1

Query: 293 SPSSIPSPTYQCTKARLEYMRSNLWSSLPQASAIAVVLLSIEAARFTWARSPPVTTDGG 117
           SP++ PSP  QC        RS      PQ S   +   +   +   W  +  +TT  G
Sbjct: 740 SPNASPSPAEQCASTTTITARS------PQGSQGLLQCATSNYSTTRWPATSVITTTTG 792


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -1

Query: 299 ENSPSSIPSPTYQCTKARLEYMRSNLWSS 213
           E   ++I   TYQC   +  + + NL+ S
Sbjct: 51  ETPLTNIEEKTYQCLLCQKAFDQKNLYQS 79


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 169 RRPASLGPDPRPSP 128
           ++P+S  P P+PSP
Sbjct: 14  QQPSSGAPGPQPSP 27


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,887
Number of Sequences: 438
Number of extensions: 3412
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)