Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23j08
         (537 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81506-1|CAB04128.1|  555|Caenorhabditis elegans Hypothetical pr...    31   0.69 
AF026215-3|AAB71323.3|  563|Caenorhabditis elegans Hypothetical ...    30   0.92 
AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associa...    29   1.6  
AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap (death-as...    29   1.6  
Z34533-1|CAA84302.3|  730|Caenorhabditis elegans Hypothetical pr...    28   3.7  
U80027-19|AAC48129.2|  313|Caenorhabditis elegans F-box a protei...    28   3.7  
AF242767-1|AAG36874.1|  258|Caenorhabditis elegans SF2 protein.        28   3.7  
AF106575-9|AAC78168.1|  139|Caenorhabditis elegans Hypothetical ...    28   4.9  
AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical ...    27   8.6  

>Z81506-1|CAB04128.1|  555|Caenorhabditis elegans Hypothetical
           protein F16H6.1 protein.
          Length = 555

 Score = 30.7 bits (66), Expect = 0.69
 Identities = 23/68 (33%), Positives = 31/68 (45%)
 Frame = -3

Query: 217 VETSITPIESLWSSSPQDRWYKFLDNGVDVVHIILSSGCSANHLRHNSSRNFTNSTVKSI 38
           VE S TP   L ++S  D+WY    N + VV  +  S C  +   +N    F  ST  + 
Sbjct: 368 VEDS-TPFLVLEANSASDQWYTSTTNTMRVVFQLCISHCLNDGANYNWKAEFKPSTAVTT 426

Query: 37  HACPILVT 14
              PI VT
Sbjct: 427 QP-PITVT 433


>AF026215-3|AAB71323.3|  563|Caenorhabditis elegans Hypothetical
           protein F09G2.5 protein.
          Length = 563

 Score = 30.3 bits (65), Expect = 0.92
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +3

Query: 381 LTKKSLPCAHRNLSFIERNQRCPSPTSSVLSSKRSYQPI 497
           +TK++  C+HRN+ + ER Q C     +  S   + +P+
Sbjct: 424 MTKRTTDCSHRNMFYEERVQECKREEKARKSIVNNNKPV 462


>AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associated
           protein kinase protein.
          Length = 1425

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 11/25 (44%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = -3

Query: 148 LDNG-VDVVHIILSSGCSANHLRHN 77
           L+NG VD+  I++++GC  NH  H+
Sbjct: 566 LENGNVDIASILITNGCDINHADHH 590


>AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap
           (death-associated protein)kinase homolog protein 1
           protein.
          Length = 1425

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 11/25 (44%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = -3

Query: 148 LDNG-VDVVHIILSSGCSANHLRHN 77
           L+NG VD+  I++++GC  NH  H+
Sbjct: 566 LENGNVDIASILITNGCDINHADHH 590


>Z34533-1|CAA84302.3|  730|Caenorhabditis elegans Hypothetical
           protein B0285.1 protein.
          Length = 730

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 447 PSPTSSVLSSKRSYQPIPYSHYQN 518
           P PT +  +S  ++QP+P S YQ+
Sbjct: 703 PPPTQASSTSHNNHQPVPQSQYQS 726


>U80027-19|AAC48129.2|  313|Caenorhabditis elegans F-box a protein
           protein 64 protein.
          Length = 313

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 14/69 (20%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
 Frame = -3

Query: 229 NDILVETSITPIESLWSSSPQDRWYKFLDNGVDVVHIILSSGCSAN--HLRHNSSRNFTN 56
           N+  +E ++  ++++W++  +   Y + ++  D++   ++S  S    H++  S  NF+ 
Sbjct: 103 NENFLEIAVKDLKTVWNNVSKLHIYNYAEDRTDIITSFINSLKSEKSVHVKQISLSNFSF 162

Query: 55  STVKSIHAC 29
           + V +I  C
Sbjct: 163 NDVLNILQC 171


>AF242767-1|AAG36874.1|  258|Caenorhabditis elegans SF2 protein.
          Length = 258

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = +3

Query: 177 EDHRDSIGVIEVSTRMSFLGKEIMTSFCATPKPQGTSFLLKQDNG 311
           EDHRD+   +       F G+ I   F     P+G S    QD G
Sbjct: 54  EDHRDAEDAVRARDGYEFDGRRIRVEFTRGVGPRGPSGRPLQDGG 98


>AF106575-9|AAC78168.1|  139|Caenorhabditis elegans Hypothetical
           protein K04F1.9 protein.
          Length = 139

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 7/58 (12%)
 Frame = -3

Query: 244 ISFPRNDILVETSITPIESLWSSSPQ-------DRWYKFLDNGVDVVHIILSSGCSAN 92
           I+   +DI ++  I+ + S+ SSSP        D W  F +N  D +++I++  C++N
Sbjct: 43  ITIYEDDIYIDDKISHLPSVLSSSPHLYSATAIDNWDGFWNNFYD-LYMIVTHNCTSN 99


>AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical
           protein Y32B12B.4 protein.
          Length = 1528

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 12/39 (30%), Positives = 24/39 (61%)
 Frame = +3

Query: 96  AEQPDDNIMCTTSTPLSKNLYHLSCGDEDHRDSIGVIEV 212
           A++P+D ++ +TS P S+     S G E+H ++   +E+
Sbjct: 793 AKEPEDVLLLSTSDPDSQRRGAQSVGVEEHEETEDFLEL 831


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,601,671
Number of Sequences: 27780
Number of extensions: 269250
Number of successful extensions: 1150
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)