Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23j07
(505 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1498 + 30589634-30589750,30590441-30590577,30590797-30591514 29 1.6
02_01_0740 - 5511434-5511547,5511952-5512023,5512106-5512300,551... 29 2.1
04_04_1157 - 31333870-31334220,31334440-31334590,31334678-313349... 29 2.8
02_05_0498 - 29520062-29520758,29521552-29521860,29523525-29524735 29 2.8
01_06_0746 - 31636024-31641396 28 3.7
06_03_0559 + 22148773-22149210,22149478-22149684,22150065-221504... 28 4.9
11_03_0131 + 10497674-10499617 27 8.6
10_04_0022 + 7687383-7687670,7688479-7688556,7689456-7689535,768... 27 8.6
08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751 27 8.6
07_03_1118 + 24110714-24111280 27 8.6
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 27 8.6
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699... 27 8.6
04_04_0751 - 27769616-27769684,27769795-27769917,27769998-277707... 27 8.6
04_03_0922 + 20834195-20836603 27 8.6
>06_03_1498 + 30589634-30589750,30590441-30590577,30590797-30591514
Length = 323
Score = 29.5 bits (63), Expect = 1.6
Identities = 21/89 (23%), Positives = 41/89 (46%)
Frame = +2
Query: 215 TEKGFEGEQSTSSWDVPGPSSLGAILDTAFTSSADNQQRNEEMECDALFAESDDEVEVLP 394
T++ E +++ + +S I TA + +R +++E D + +D + +V
Sbjct: 168 TDRSRNSEDTSNGFSATNGASGAKINGTAKAKQDGSIRRRQKVEADQVSNTTDTQDDVF- 226
Query: 395 TSDIASNILNEQVPKPVSSNYVNSTISNP 481
T I + +P+P+SS N SNP
Sbjct: 227 TDPI--KMTKSLLPRPISSIRQNMDTSNP 253
>02_01_0740 -
5511434-5511547,5511952-5512023,5512106-5512300,
5512408-5512611,5512690-5512848,5513144-5513249,
5513387-5513554,5513644-5513834,5514410-5514634,
5514818-5514935,5515023-5515195,5515280-5515327,
5515484-5515589,5515697-5515802,5516211-5516332,
5516661-5516741,5516844-5516934,5517036-5517132,
5517287-5517919
Length = 1002
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 218 EKGFEGEQSTSSWDVPGPSSLGAILDT 298
E G EGE+S +SW VP G DT
Sbjct: 104 EDGEEGEESVASWGVPDDCYYGNFSDT 130
>04_04_1157 -
31333870-31334220,31334440-31334590,31334678-31334909,
31335001-31335211,31335517-31335635,31335720-31335953,
31336000-31336201,31336297-31336676,31336792-31336856,
31337362-31337427,31337883-31337957,31338233-31338304,
31338994-31339062,31339150-31339221,31339325-31339396,
31339791-31339862,31339947-31340018,31340474-31340545,
31340645-31340828,31341474-31341588
Length = 961
Score = 28.7 bits (61), Expect = 2.8
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 233 GEQSTSSWDVPGPSSLGAILDTAFTSSADNQQRNEEMECDALFAES 370
G+Q+ SSW++ G G D S+ D+ N + CD F S
Sbjct: 50 GQQAQSSWNLSGDPCTGRATD---GSAIDDTSFNPAITCDCTFQNS 92
>02_05_0498 - 29520062-29520758,29521552-29521860,29523525-29524735
Length = 738
Score = 28.7 bits (61), Expect = 2.8
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -3
Query: 410 MQYQMWVAPPLHHHSQQTKHHTPFLHFSVDCQH 312
+Q M VAP HH QQ HH P L + QH
Sbjct: 692 LQTGMMVAPT-HHREQQKHHHHPHLQPHGEEQH 723
>01_06_0746 - 31636024-31641396
Length = 1790
Score = 28.3 bits (60), Expect = 3.7
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -3
Query: 449 MILVWAPVR*VYLMQYQMWVA 387
+I++W PV +YLM Q+W A
Sbjct: 551 VIILWLPVIIIYLMDIQIWYA 571
>06_03_0559 +
22148773-22149210,22149478-22149684,22150065-22150471,
22150655-22151472,22151564-22151674,22151846-22152015
Length = 716
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 365 ESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNP 481
E +DE E PT S+ +++ +P+SSN +ST+S+P
Sbjct: 222 EEEDEEEFQPTPISTSSQRSQKGKRPLSSN--SSTLSSP 258
>11_03_0131 + 10497674-10499617
Length = 647
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = -2
Query: 333 FLC*LSALDVKAVSRIAPRDDGPGTSQEDVDCSPSKPF 220
F+C K + P D P D+ CSP KPF
Sbjct: 438 FICGFLGHSDKECDKKVPNADHPFRFSADLRCSPLKPF 475
>10_04_0022 +
7687383-7687670,7688479-7688556,7689456-7689535,
7689876-7690095,7690444-7690677
Length = 299
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 93 YVCLSILP*PMKWLINLF*RKQSE 164
Y+C + LP P +L+NL R+Q E
Sbjct: 130 YMCFNHLPLPANFLLNLVNRRQKE 153
>08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751
Length = 478
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 190 ILHFNNSGNSDCLRQKRLINHFIGYGRILK 101
++ F NSG C+ RL+ F G +ILK
Sbjct: 161 MVRFVNSGTEACMGALRLVRAFTGREKILK 190
>07_03_1118 + 24110714-24111280
Length = 188
Score = 27.1 bits (57), Expect = 8.6
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +2
Query: 173 IIKVQYGITLLKRMTEKGFEGEQSTSSWDVP--GPSSLGAILDTAFTSSADNQQRNEEME 346
I+KV G + + F G Q +SSW VP G++ +F +S+ Q++ E +
Sbjct: 123 ILKVNRGYSSADGVVVAKFHGGQMSSSW-VPFAVEHGRGSVWPGSFKASSQEQKKRTEED 181
Query: 347 CD 352
D
Sbjct: 182 LD 183
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 266 GPSSLGAILDTAFTSSADNQQRNEEMECDALFAESDDEVEVLPTSDIA 409
GPSS+ A+L ++ Q+R E D+ FA + D+ V TS+++
Sbjct: 3973 GPSSVPAVLQLTDSNQPAEQERLE--NSDSKFASTKDQGRVDGTSNLS 4018
>05_07_0200 -
28368890-28369021,28369169-28369303,28369918-28369947,
28370019-28370093,28370222-28370333,28370440-28370621,
28370723-28370854,28372193-28373479
Length = 694
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +2
Query: 278 LGAILDTAFTSSADNQQRNEEME 346
L A LD A SS DN+QR EME
Sbjct: 163 LRAALDAAAASSRDNEQRILEME 185
>04_04_0751 - 27769616-27769684,27769795-27769917,27769998-27770770,
27771407-27771773,27772104-27772217,27772307-27772403,
27772968-27773088,27773168-27773252,27773349-27773498,
27773630-27773746,27773819-27773905,27773981-27774049,
27774125-27774181,27774266-27774349,27774477-27774513,
27774721-27774869,27776053-27776538,27776743-27776886,
27776961-27777509,27778332-27778526,27779226-27779310,
27779570-27779670,27779689-27780360,27781101-27781433,
27781957-27782038,27782258-27782334,27782713-27782817,
27783810-27783944,27784437-27785159,27785882-27786663,
27787480-27789187
Length = 2891
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/71 (22%), Positives = 28/71 (39%)
Frame = +2
Query: 275 SLGAILDTAFTSSADNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSN 454
S I+ S D + NE++E D + DD ++ + +I + N
Sbjct: 1960 STAPIITAEAMSVDDRNEDNEQLESDTTQSSVDDRLQQADQQSVKGSIDSRGSGISADRN 2019
Query: 455 YVNSTISNPTF 487
V ST+ P +
Sbjct: 2020 LVRSTVIAPGY 2030
>04_03_0922 + 20834195-20836603
Length = 802
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -2
Query: 321 LSALDVKAVSRIAPRDDGPGTSQEDVDCSPSKPFSVILFNNVIPYCT 181
+S L+ + VSR D PG ++D S + + L N+ PY T
Sbjct: 171 ISGLNSRLVSRKNSIDLAPGKYSVELDPSGANQYIFTLLNSSTPYLT 217
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,530,509
Number of Sequences: 37544
Number of extensions: 239692
Number of successful extensions: 812
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1071221400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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