Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23j07
         (505 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.4  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   2.4  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   9.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.6  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 343  HFFISLLIVSTRCEGSIQN 287
            HF  S  ++S +CEG   N
Sbjct: 1622 HFVASYALISNQCEGDSLN 1640


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 392 VAPPLHHHSQQTK 354
           + PP HHH  QT+
Sbjct: 347 MGPPHHHHHHQTQ 359


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 39  LNKLISYLFFLKIHVKNSYVC 101
           LNK++S  +   I + N ++C
Sbjct: 149 LNKVVSVFYTAVIPMLNPFIC 169


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -2

Query: 267  PGTSQEDVDCSPSKPFS 217
            PGT+       P KPF+
Sbjct: 1117 PGTADNKPQLKPQKPFT 1133


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,596
Number of Sequences: 438
Number of extensions: 2774
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)