Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23j05
         (655 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    32   0.59 
AY051854-1|AAK93278.1|  822|Drosophila melanogaster LD35257p pro...    29   7.3  
AE014297-585|AAF54043.1|  822|Drosophila melanogaster CG1234-PA ...    29   7.3  

>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 32.3 bits (70), Expect = 0.59
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
 Frame = +3

Query: 294   DRLIRELSGTPCGSNVQCRNECGDKVAARLMRDFWNILKEDPSCNLAHEVQ------NRL 455
             D +I   S +PCGSN QCR+  G  V + L        +  P C ++ E        N+ 
Sbjct: 11980 DPIIEACSPSPCGSNSQCRDVNGHAVCSCLEGYIGAPPQCRPECVVSSECSALQACVNKK 12039

Query: 456   CARPSSRSC 482
             C  P + +C
Sbjct: 12040 CVDPCAAAC 12048



 Score = 31.5 bits (68), Expect = 1.0
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +3

Query: 321   TPCGSNVQCRNECGDKVAARLMRDFWNILKEDPSC 425
             +PCG N QCRN  G  V +  +RDF  +    PSC
Sbjct: 17114 SPCGPNAQCRNINGQAVCS-CLRDFIGV---PPSC 17144



 Score = 31.1 bits (67), Expect = 1.4
 Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 9/72 (12%)
 Frame = +3

Query: 321   TPCGSNVQCRNECGDKVAARLMRDFWNILKEDPSCNLAHEVQ------NRLCARPSSRSC 482
             +PCG+N QCR   G  + + +   F       P C  + E        N+ CA P   SC
Sbjct: 16265 SPCGANAQCRQSQGQAICSCIPNYFGVPPNCRPECTQSSECLSSLACINQRCADPCPGSC 16324

Query: 483   ---DSCSHRQHI 509
                  C  R H+
Sbjct: 16325 AYNAICHVRNHV 16336



 Score = 30.3 bits (65), Expect = 2.4
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 12/77 (15%)
 Frame = +3

Query: 321   TPCGSNVQCRNECGDKVAARLMRDFW---NILKE---DPSCNLAHEVQNRLCARPS---- 470
             +PCG+N QC    G+ + + L   F    N   E      C+  H   N  C  P     
Sbjct: 20491 SPCGANAQCLERNGNAICSCLAGYFGQPPNCRLECYSSSDCSQVHSCINNKCVDPCPGKC 20550

Query: 471   --SRSCDSCSHRQHIAC 515
               +  C +  HR H  C
Sbjct: 20551 GLNAVCQAIQHRAHCEC 20567



 Score = 29.1 bits (62), Expect = 5.5
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = +3

Query: 321   TPCGSNVQCRNECGDKVAARLMRDFWNILKEDPSCNLAHEVQNRLCARPSSRSC 482
             +PCG + QC NE G+ V  R + ++  +    P C     + N  C  PS R+C
Sbjct: 18506 SPCGPHAQCSNEGGNAV-CRCLTEYLGV---PPYCR-PECIANSEC--PSDRAC 18552



 Score = 28.7 bits (61), Expect = 7.3
 Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
 Frame = +3

Query: 321   TPCGSNVQCRNECGDKVAARLMRDFWNILKEDPSCNLAHEVQNRL-CARPSSRSCDSC 491
             TPCG N +CRN  G    + L+          P C +  E  ++L C     R  D C
Sbjct: 13696 TPCGPNSECRNINGVPACSCLVNFIGQAPNCRPECTINSECPSQLACINQKCR--DPC 13751



 Score = 28.7 bits (61), Expect = 7.3
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
 Frame = +3

Query: 321   TPCGSNVQCRNECGDKVAARLMRDFWNILKEDPSCNLAHE------VQNRLCARPSSRSC 482
             +PCGS  +CR + G  V + L   F       P C+  ++       QN+ C  P   +C
Sbjct: 15836 SPCGSYAECREQNGQAVCSCLPNYFGVPPSCRPECSTNYDCSPSLACQNQRCVDPCPGAC 15895



 Score = 28.3 bits (60), Expect = 9.6
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
 Frame = +3

Query: 321   TPCGSNVQCRNECGDKVAARLMRDFWNI-LKEDPSCNLAHEVQ------NRLCARPSSRS 479
             +PCG+N QCR E  D+     +  F+ +  K  P C +  +        N+ C  P   +
Sbjct: 17753 SPCGNNAQCR-EVNDQAVCSCLPGFFGVPPKCRPECTINSDCAPHLACLNQQCRDPCPGA 17811

Query: 480   CDSCSHRQHI 509
             C   +  Q I
Sbjct: 17812 CGQFAQCQVI 17821


>AY051854-1|AAK93278.1|  822|Drosophila melanogaster LD35257p
           protein.
          Length = 822

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 13/49 (26%), Positives = 26/49 (53%)
 Frame = +3

Query: 276 RRKKALDRLIRELSGTPCGSNVQCRNECGDKVAARLMRDFWNILKEDPS 422
           +R+K L  + REL  T    N Q +++   ++   +   ++ +LK DP+
Sbjct: 480 KRRKKLTEVNRELEETRAEENKQAKHQKLTEIIKMVFTIYFRVLKNDPT 528


>AE014297-585|AAF54043.1|  822|Drosophila melanogaster CG1234-PA
           protein.
          Length = 822

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 13/49 (26%), Positives = 26/49 (53%)
 Frame = +3

Query: 276 RRKKALDRLIRELSGTPCGSNVQCRNECGDKVAARLMRDFWNILKEDPS 422
           +R+K L  + REL  T    N Q +++   ++   +   ++ +LK DP+
Sbjct: 480 KRRKKLTEVNRELEETRAEENKQAKHQKLTEIIKMVFTIYFRVLKNDPT 528


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,282,026
Number of Sequences: 53049
Number of extensions: 546514
Number of successful extensions: 1336
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1335
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)