Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23j02
         (505 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    27   0.11 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                26   0.26 
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    21   9.6  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   9.6  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 27.1 bits (57), Expect = 0.11
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 159 SSVTKTGMTYQSVYKKGANTANGRGAHSGEDEMVDIT 269
           + +T TG+   + Y+      NG  A +G+ E VDIT
Sbjct: 375 TKITITGLNAVTTYRFQVFAENGVSALAGKSEYVDIT 411


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 25.8 bits (54), Expect = 0.26
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 254 NGRYHAGPPASGGRRHHTHKPRNLPDLRTRKP 349
           +G +  GP       HH H+ ++L  L  R+P
Sbjct: 338 HGNHTMGPTMGPPHHHHHHQTQSLQHLHYRQP 369


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 12/44 (27%), Positives = 17/44 (38%)
 Frame = -2

Query: 255 FHPHRYEHHAHSQCLRPFCKLIDKSFLFLLLTTSKETSPCLCNL 124
           FH    E  A       +C+ +  S   L +     T PC C+L
Sbjct: 4   FHCAAAEGQAKKSFSCKYCEKVYVSLGALKMHIRTHTLPCKCHL 47


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 452 NSMEIFILSNSRNIIITLHS*EH 384
           N ME  ILS ++N+   LH+  H
Sbjct: 347 NIMEASILSPNQNVYGDLHNFGH 369


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,197
Number of Sequences: 438
Number of extensions: 2818
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)