Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23j01
(567 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces pomb... 30 0.27
SPCP20C8.01c |||B13958 domain|Schizosaccharomyces pombe|chr 3|||... 29 0.48
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 28 0.83
SPAC9E9.14 |vps24||vacuolar sorting protein Vps24|Schizosaccharo... 28 0.83
SPBC2G2.08 |ade9||C-1-tetrahydrofolatesynthase/methylenetetrahyd... 28 1.1
SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr... 27 1.9
SPAC22A12.01c |pso2|snm1, SPAC56F8.17c, snm1|DNA 5' exonuclease ... 27 1.9
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 27 1.9
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 27 2.5
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 26 3.4
SPBC4F6.16c |ero11||ER oxidoreductin Ero1a|Schizosaccharomyces p... 26 3.4
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 26 4.4
SPAC18B11.11 ||SPAC1F5.01|GTPase activating protein |Schizosacch... 26 4.4
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 26 4.4
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 26 4.4
SPBC16H5.09c |||alpha-1,2-mannosyltransferase |Schizosaccharomyc... 25 5.9
SPAC926.05c |||diphthamide biosynthesis protein Dph4 |Schizosacc... 25 5.9
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 25 5.9
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 25 5.9
SPAC664.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 25 5.9
SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr 1|||Ma... 25 7.7
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 25 7.7
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 25 7.7
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 25 7.7
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 25 7.7
>SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 323
Score = 29.9 bits (64), Expect = 0.27
Identities = 18/93 (19%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = +1
Query: 133 DWDARLYGLQVTADTRRADAFDLRHSAHQLRNET-RIKTEWDSYHNNNRLSARVYEIEQW 309
+ ++R +Q + + + +++ +++ ET R+ T D + AR IEQ
Sbjct: 132 EMNSRFDAVQNEMTSMKGEMAEMKVEMVEMKRETIRLNTRIDLLEQ--KTEARFQSIEQR 189
Query: 310 KSTLQELLDRIDREMGSLKEEKASTERELEQLN 408
+++ + + IDR S+++ S ++++E ++
Sbjct: 190 FNSIDQRFNSIDRRFDSMEQRLDSMDQKMETID 222
>SPCP20C8.01c |||B13958 domain|Schizosaccharomyces pombe|chr
3|||Manual
Length = 247
Score = 29.1 bits (62), Expect = 0.48
Identities = 18/93 (19%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = +1
Query: 133 DWDARLYGLQVTADTRRADAFDLRHSAHQLRNET-RIKTEWDSYHNNNRLSARVYEIEQW 309
+ ++R +Q + + + +++ +++ ET R+ T D + AR IEQ
Sbjct: 132 EMNSRFDTVQNEMTSMKGEMAEMKVEMVEMKRETIRLNTRIDLLEQ--KTEARFQSIEQR 189
Query: 310 KSTLQELLDRIDREMGSLKEEKASTERELEQLN 408
+++ + + IDR S+++ S ++++E ++
Sbjct: 190 FNSIDQRFNSIDRRFDSMEQRLDSMDQKMETID 222
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 28.3 bits (60), Expect = 0.83
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 238 IKTEWDSYHNNNRLSARV-YEIEQWKSTLQELLDRIDREMGSLKEEKASTERELEQLN 408
+K E + + N+L + YE K+ +Q LL+ ++ ++ + E+ TER++ + N
Sbjct: 347 LKDENELFMKQNQLYRTILYETRNKKTLVQNLLNSLEGKLQAHLEKFEQTERDISEKN 404
>SPAC9E9.14 |vps24||vacuolar sorting protein
Vps24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 231
Score = 28.3 bits (60), Expect = 0.83
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Frame = +1
Query: 304 QWKSTLQELLDRIDREMGSLKEEKASTERELEQL-------NLPLLVCSECLSNRDGRRS 462
+W+S +++ ++DR++ LK + E +L+QL N+ +L +NR G+R
Sbjct: 19 KWQSIIRKEQRQLDRQVYHLKAGRKKAEVQLKQLAKQSDITNMRILAKEIARANRHGKRL 78
Query: 463 SE 468
+E
Sbjct: 79 AE 80
>SPBC2G2.08 |ade9||C-1-
tetrahydrofolatesynthase/methylenetetrahydrofolatedehydr
ogenase/methylenetetrahydrofolatecyclohydrolase/formylte
trahydrofolatesynthetase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 969
Score = 27.9 bits (59), Expect = 1.1
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 328 LLDRIDREMGSLKEEKASTER-ELEQLNLPLLVCSECLS 441
+LD DR + S++ KASTE+ + + + + V SEC+S
Sbjct: 558 VLDVNDRFLRSIEVGKASTEKGHVRKTSFDISVASECMS 596
>SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1516
Score = 27.1 bits (57), Expect = 1.9
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 7/50 (14%)
Frame = +1
Query: 274 RLSARVYEI-------EQWKSTLQELLDRIDREMGSLKEEKASTERELEQ 402
RL +R++EI EQ + +E + ++ + + E K + ERELEQ
Sbjct: 927 RLESRLFEISKQLDNSEQENNKFRERIAELESHLSNYAEAKLAQERELEQ 976
>SPAC22A12.01c |pso2|snm1, SPAC56F8.17c, snm1|DNA 5' exonuclease
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 560
Score = 27.1 bits (57), Expect = 1.9
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -3
Query: 436 DILSRLVEEDSVVQAPFRWKPSLLSNFPFRGQCGQAIL 323
+ +S+ +++DSVV+A PS S FP C QA+L
Sbjct: 137 EAVSKKLKKDSVVKAD----PSNSSTFPISDSCKQALL 170
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 27.1 bits (57), Expect = 1.9
Identities = 14/58 (24%), Positives = 32/58 (55%)
Frame = +1
Query: 289 VYEIEQWKSTLQELLDRIDREMGSLKEEKASTERELEQLNLPLLVCSECLSNRDGRRS 462
+YE+ Q S LQ+ + +++ KE + + RE++ L+ ++ + +RD ++S
Sbjct: 411 IYELRQKVSILQKRIAEESKQLALNKEVRKISSREIKMLDARSMLKNSFDGSRDLQKS 468
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 26.6 bits (56), Expect = 2.5
Identities = 7/29 (24%), Positives = 20/29 (68%)
Frame = +1
Query: 265 NNNRLSARVYEIEQWKSTLQELLDRIDRE 351
N+N L + ++++ +W+S + LL ++ ++
Sbjct: 3261 NSNGLKSYIFKLRKWRSYFERLLSKVPKK 3289
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 26.2 bits (55), Expect = 3.4
Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 235 RIKTEWDSYHNNNR-LSARVYEIEQWKSTLQELLDRIDREMGSLKEEKASTERELEQ 402
R+ +++ Y ++ + L R+ E+++ + + +I+R+M K K S ELE+
Sbjct: 741 RLLSDYQQYKDDVKDLKQRLPELDRLILQSDQAIKKIERDMQEWKHNKGSKMAELEK 797
>SPBC4F6.16c |ero11||ER oxidoreductin Ero1a|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 467
Score = 26.2 bits (55), Expect = 3.4
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 19 VINIFLEIWYFLLLPNILI 75
+I+I+ IW FLLLP I+I
Sbjct: 7 LISIWNAIWNFLLLPEIII 25
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 25.8 bits (54), Expect = 4.4
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 304 QWKSTLQELLDRIDREMGSLKEEKASTEREL 396
+WK+ L+ L+ +D + G +KE+ S +REL
Sbjct: 12 RWKA-LERQLEMLDLQEGFIKEDCKSLKREL 41
>SPAC18B11.11 ||SPAC1F5.01|GTPase activating protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1294
Score = 25.8 bits (54), Expect = 4.4
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 481 DRRSTQNFFYRHGWIDILSRLVEEDSVVQAPFRWKP 374
+RRS Y WI +L LVE S + ++P
Sbjct: 335 ERRSFVEVLYADEWISLLDLLVEISSSLPKSLNYRP 370
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 25.8 bits (54), Expect = 4.4
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +1
Query: 241 KTEWDSYHNNNR--LSARVYEIEQWKSTLQELLDRIDREMGSLKEEKASTERELEQLNLP 414
K E +S NN LS + EQ KS LQE + D E+ L + + + E++++ L
Sbjct: 956 KGELESLRENNATVLSEKAEFNEQCKS-LQETIVTKDAELDKLTKYISDYKTEIQEMRLT 1014
Query: 415 LLVCSECLSNRDGRRSSEL 471
+E ++G S L
Sbjct: 1015 NQKMNEKSIQQEGSLSESL 1033
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 25.8 bits (54), Expect = 4.4
Identities = 24/99 (24%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +1
Query: 268 NNRLSARVYEIEQWKSTLQELLDRIDREMGSLKEEKASTERE-LEQLNLPL-LVCSECLS 441
N +S ++ ++E + Q+ DR+ G L + +++ E LE+ L L + L
Sbjct: 886 NRNVSEKMNDLE---NAAQKFFSSPDRKNGYLYPSEHTSKIEYLEKTIEDLKLALQDELK 942
Query: 442 NRDGRRSSELTYDLADTELKKELCVTESNKKMLIDRCQS 558
NR+ +Y+ T+L++++ E + +LID +S
Sbjct: 943 NRNLLMDDISSYNKQTTKLQEKIKWLERERSILIDELES 981
>SPBC16H5.09c |||alpha-1,2-mannosyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 372
Score = 25.4 bits (53), Expect = 5.9
Identities = 30/103 (29%), Positives = 43/103 (41%), Gaps = 13/103 (12%)
Frame = -3
Query: 565 PKRIDNDLSTSSCCFLLRKAPF---SIQYRQDRRSTQNFFYRHGWIDILSRL--VEEDS- 404
PK ID D++ S+ L R+ YRQ R FF+RH +D VE +
Sbjct: 134 PKWIDMDIAHSNWNRLSREGVLYGGMKSYRQMCRYFSGFFWRHPLLDPYKYYWRVEPSTK 193
Query: 403 ----VVQAPFRWKPSLLSNFPF---RGQCGQAILGAWTSIVQF 296
V + PFR L + F + GQ + W S ++F
Sbjct: 194 LLCEVNKDPFRQLRLLNKTYGFVITLFEIGQTVPSLWNSTLEF 236
>SPAC926.05c |||diphthamide biosynthesis protein Dph4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 139
Score = 25.4 bits (53), Expect = 5.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 289 VYEIEQWKSTLQELLDRIDREMGSLKEEKAST 384
VY I+Q K Q L DR+ +K+E+ S+
Sbjct: 43 VYTIDQVKEAYQVLSSEKDRQQYQIKQEEESS 74
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 25.4 bits (53), Expect = 5.9
Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Frame = +1
Query: 241 KTEWDSYHNNNRLSARVY---EIEQWKSTLQELLDRIDREMGSLKEEKASTERELEQLNL 411
+ E DS N + +V E E KS +LL ++ ++ SL ++ + + E+E +
Sbjct: 658 EAEVDSLRKENEENKQVIALKESELVKSNDNKLL--LNEQIESLNDQLSQLKTEMESVTT 715
Query: 412 PLLVCSECLSNRDGRRSSELTYDLADTELKKELCVTESNKKM 537
++ LSN R + EL D + +L++ + SN +
Sbjct: 716 SKESLADYLSNLKERHNDEL--DSLNKKLREFEGILSSNSSL 755
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 25.4 bits (53), Expect = 5.9
Identities = 21/94 (22%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Frame = +1
Query: 292 YEIEQWKSTLQELLDRIDREMGSLKEEKASTERE--------LEQLNLPLLVCSECLSNR 447
+E+E + ++ + +RE+ L+E+ AS ER L + N + + L ++
Sbjct: 545 HELETMHRSQRDKQESTERELRLLQEKAASLERNKSSEVSNLLSRYNTEVAHLEDALHSK 604
Query: 448 DGRRSSELTYDLADTELKKELCVTESNKKMLIDR 549
D R + L +L TE + + E +++ I +
Sbjct: 605 D-RELANLGVELKSTENRYRQLLQEKEEELEIQK 637
>SPAC664.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 117
Score = 25.4 bits (53), Expect = 5.9
Identities = 20/93 (21%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Frame = +1
Query: 160 QVTADTRRADAFDLRHSAHQL--------RNETRIKTEWDSYHNNNRLSARVYE-IEQWK 312
Q+ + A+A + R+S++ L +E ++ + +N + Y+ IE+
Sbjct: 14 QIRCEREIAEAAEARNSSNSLIVVDEYSKESEDVLENGLEHVQSNEFTESEDYKSIERSL 73
Query: 313 STLQELLDRIDREMGSLKEEKASTERELEQLNL 411
+ + ++ R ++EMGSL+++ + L+ NL
Sbjct: 74 AVTEAVMARFEKEMGSLRDQMNFFHQILDNDNL 106
>SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 899
Score = 25.0 bits (52), Expect = 7.7
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = +1
Query: 196 DLRHSAHQLRNETRIKTEWDSYHNNNRLSARVYEIEQWKSTLQELLDRIDREMGSLKEEK 375
D S Q R+K E D NN++ A E + WKS EL I+ + L+ +
Sbjct: 614 DKHRSESQAALNRRVKWENDF---NNKIKALREEKKAWKSEESELKSSIESLISQLESIR 670
Query: 376 AS 381
S
Sbjct: 671 NS 672
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 25.0 bits (52), Expect = 7.7
Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +1
Query: 259 YHNNNRLSARVYEIEQWKSTLQELLDRIDREMGSLKEEKASTERELEQLNLPLLVCSEC- 435
+ + ++L+A+V ++ Q R + GSL + E+ LN+P E
Sbjct: 337 FEDESQLNAQVKNVQAKIRRAQRDQQRQEESEGSLDVTEIDVEQAFPLLNVPDAELDEAG 396
Query: 436 LSNRDGRRSSELTYDLADTELKKELCVTES 525
L + +R + YD A K E + E+
Sbjct: 397 LRQKRHQRLMKANYD-ARVRAKAEKAIEEA 425
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 25.0 bits (52), Expect = 7.7
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -3
Query: 277 VGYCCGSCPIRS*SSSHFGADGHCASSQKRLLVLYRQSPANRT 149
VG G P+RS SS++FG + +S + V +R+ A T
Sbjct: 489 VGTAMGVAPVRSNSSNNFGQNFFHQTSPQFSAVPHRKVSAQDT 531
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 25.0 bits (52), Expect = 7.7
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 349 EMGSLKEEKASTERELEQLNLPLLVCSECLSN-RDGRRSSELTYDLADTELKKE 507
E S KEE +ST+R+L ++ L E L R SE T DTE+ E
Sbjct: 1447 EFNSTKEELSSTQRKLSEIMDILNTTKEELEKVRQNSNKSEGT--SKDTEIPNE 1498
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 25.0 bits (52), Expect = 7.7
Identities = 9/50 (18%), Positives = 30/50 (60%)
Frame = +1
Query: 262 HNNNRLSARVYEIEQWKSTLQELLDRIDREMGSLKEEKASTERELEQLNL 411
+ ++ + +++ EIE ++ T+ ++ ++ + +++ +RELE+L +
Sbjct: 38 YESSMIQSQIQEIEAFRKTVDDMYEKQKSIRETYEKDINKLKRELEELGV 87
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,256,245
Number of Sequences: 5004
Number of extensions: 45307
Number of successful extensions: 197
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 240047038
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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