Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23i22
         (630 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF499232-2|AAP29639.1| 1183|Homo sapiens pol protein protein.          43   8e-04
AB037726-1|BAA92543.2| 1819|Homo sapiens KIAA1305 protein protein.     33   1.1  

>AF499232-2|AAP29639.1| 1183|Homo sapiens pol protein protein.
          Length = 1183

 Score = 43.2 bits (97), Expect = 8e-04
 Identities = 18/49 (36%), Positives = 30/49 (61%)
 Frame = +2

Query: 2   DKTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLKKG 148
           ++   I T P PK+ K+V  F+G   + R +I  +A++AKPL ++ K G
Sbjct: 392 ERKQVICTLPEPKSRKQVRKFLGAAGFCRLWIPNFAVLAKPLYEVTKWG 440


>AB037726-1|BAA92543.2| 1819|Homo sapiens KIAA1305 protein protein.
          Length = 1819

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 46/182 (25%), Positives = 63/182 (34%), Gaps = 10/182 (5%)
 Frame = +2

Query: 32   VPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLK-KGXXXXXXXXXXXXXXLKSKLC 208
            +P N   +  F+G     R  I  Y  +  PL  LLK K               LK  L 
Sbjct: 1008 IPSNFTALSFFMGFMDSHRDAIPDYEALVGPLHSLLKQKPDWQWDQEHEEAFLALKRALV 1067

Query: 209  NNPVLKIFDIHLETELHTDASMYGYAAILLQRDPNDNCMHPVHYMSRK--TSDAQQKCSS 382
            +   L   +  L   L    S     AIL Q   +    HP+ Y S+     +  Q   S
Sbjct: 1068 SALCLMAPNSQLPFRLEVTVSHVALTAILHQE--HSGRKHPIAYTSKPLLPDEESQGPQS 1125

Query: 383  YELEALAVIEGVKKFRRYLIGKPFKIVTDCEAFQKTLNKKDV-------SAKVARWILYL 541
                  AV   +K F R +   P  +V D     +T    +V        A + RW L +
Sbjct: 1126 GGDSPYAVAWALKHFSRCIGDTP--VVLDLSYASRTTADPEVREGRRVSKAWLIRWSLLV 1183

Query: 542  QD 547
            QD
Sbjct: 1184 QD 1185


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,027,322
Number of Sequences: 237096
Number of extensions: 1380844
Number of successful extensions: 2646
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2646
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)