Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23i22
(630 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 204 1e-52
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 204 1e-52
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 194 8e-50
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr... 165 3e-41
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros... 128 5e-30
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros... 126 2e-29
AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ... 126 3e-29
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 125 4e-29
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 122 3e-28
AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein ... 122 3e-28
AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein ... 119 3e-27
AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran... 118 5e-27
AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed... 116 3e-26
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ... 103 3e-22
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein. 101 6e-22
AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed... 97 2e-20
U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transc... 96 3e-20
AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprot... 92 7e-19
AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p pro... 91 9e-19
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 89 5e-18
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 89 5e-18
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 89 6e-18
AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein ... 88 1e-17
AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed... 87 2e-17
M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei... 86 3e-17
EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ... 86 3e-17
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ... 86 3e-17
DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein ... 86 3e-17
DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein ... 86 3e-17
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr... 86 3e-17
X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D. m... 84 1e-16
S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotei... 60 2e-09
AE014298-2529|AAN09434.1| 1370|Drosophila melanogaster CG32562-P... 28 9.1
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 204 bits (497), Expect = 1e-52
Identities = 104/205 (50%), Positives = 133/205 (64%), Gaps = 1/205 (0%)
Frame = +2
Query: 2 DKTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLKK-GXXXXXXXXXX 178
+KT+A+ +F P+N+K V F+GLT +FRKFI YA IA+PL+DLLKK
Sbjct: 702 EKTSAVNSFGTPQNVKAVQGFLGLTGFFRKFIPGYAQIARPLTDLLKKDAIFNIGPVEQQ 761
Query: 179 XXXXLKSKLCNNPVLKIFDIHLETELHTDASMYGYAAILLQRDPNDNCMHPVHYMSRKTS 358
LK L N PVL+I+ ETELHTDAS G A+LLQ+ + HPV + SRKT+
Sbjct: 762 SVNKLKEILVNEPVLRIYSREAETELHTDASKDGLGAVLLQKF--EGSFHPVCFWSRKTT 819
Query: 359 DAQQKCSSYELEALAVIEGVKKFRRYLIGKPFKIVTDCEAFQKTLNKKDVSAKVARWILY 538
A+ SY LE A +KKFR YL+G PFK+VTDC AF++T K DV +V WILY
Sbjct: 820 KAESNRHSYYLEVKAAYLALKKFRHYLLGVPFKLVTDCVAFKQTTKKADVPREVGPWILY 879
Query: 539 LQDFDFSIEHRTGDRMQHVDALSRN 613
+QDF+F EHR G+RM+HVD LSR+
Sbjct: 880 MQDFNFQPEHRAGERMRHVDFLSRH 904
>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p protein.
Length = 1026
Score = 204 bits (497), Expect = 1e-52
Identities = 104/205 (50%), Positives = 133/205 (64%), Gaps = 1/205 (0%)
Frame = +2
Query: 2 DKTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLKK-GXXXXXXXXXX 178
+KT+A+ +F P+N+K V F+GLT +FRKFI YA IA+PL+DLLKK
Sbjct: 396 EKTSAVNSFGTPQNVKAVQGFLGLTGFFRKFIPGYAQIARPLTDLLKKDAIFNIGPVEQQ 455
Query: 179 XXXXLKSKLCNNPVLKIFDIHLETELHTDASMYGYAAILLQRDPNDNCMHPVHYMSRKTS 358
LK L N PVL+I+ ETELHTDAS G A+LLQ+ + HPV + SRKT+
Sbjct: 456 SVNKLKEILVNEPVLRIYSREAETELHTDASKDGLGAVLLQKF--EGSFHPVCFWSRKTT 513
Query: 359 DAQQKCSSYELEALAVIEGVKKFRRYLIGKPFKIVTDCEAFQKTLNKKDVSAKVARWILY 538
A+ SY LE A +KKFR YL+G PFK+VTDC AF++T K DV +V WILY
Sbjct: 514 KAESNRHSYYLEVKAAYLALKKFRHYLLGVPFKLVTDCVAFKQTTKKADVPREVGPWILY 573
Query: 539 LQDFDFSIEHRTGDRMQHVDALSRN 613
+QDF+F EHR G+RM+HVD LSR+
Sbjct: 574 MQDFNFQPEHRAGERMRHVDFLSRH 598
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 194 bits (473), Expect = 8e-50
Identities = 95/200 (47%), Positives = 131/200 (65%), Gaps = 1/200 (0%)
Frame = +2
Query: 14 AIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLKKGXXXXXXXXXXXXXX- 190
AI FP+P N+ V SF+GL SYFR+FI+ ++ +AKPL D+LKK
Sbjct: 934 AIKNFPIPNNVHTVQSFLGLCSYFRRFIKDFSRLAKPLHDILKKDKPFKFGSEEMICFNM 993
Query: 191 LKSKLCNNPVLKIFDIHLETELHTDASMYGYAAILLQRDPNDNCMHPVHYMSRKTSDAQQ 370
LK KL +PVL I++ ETELH DAS G+ A+L+Q+ D HPV + S++T+D +
Sbjct: 994 LKDKLIQSPVLAIYNHKHETELHCDASSSGFGAVLMQKK-EDQKWHPVSFFSKRTTDIES 1052
Query: 371 KCSSYELEALAVIEGVKKFRRYLIGKPFKIVTDCEAFQKTLNKKDVSAKVARWILYLQDF 550
K S+ELE LA++ +++FR YL + FKIVTDC + TL+KK+++ ++ARW L Q +
Sbjct: 1053 KYHSFELETLAIVYSLRRFRVYLHWRTFKIVTDCNSLILTLSKKELNPRIARWALEFQGY 1112
Query: 551 DFSIEHRTGDRMQHVDALSR 610
DF I HR G RMQHVDALSR
Sbjct: 1113 DFEIVHRAGSRMQHVDALSR 1132
>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
protein.
Length = 1053
Score = 165 bits (402), Expect = 3e-41
Identities = 87/206 (42%), Positives = 118/206 (57%), Gaps = 1/206 (0%)
Frame = +2
Query: 5 KTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLK-KGXXXXXXXXXXX 181
K ++ + P P+ + V FIGL SYFRKF+ ++ + KPL L G
Sbjct: 660 KIASLSSLPPPQTVSGVRQFIGLASYFRKFVSGFSQLMKPLYSLSSGSGKITWSAELEEI 719
Query: 182 XXXLKSKLCNNPVLKIFDIHLETELHTDASMYGYAAILLQRDPNDNCMHPVHYMSRKTSD 361
+ + L N P L IFD ELHTDAS GY AILL R ++ H + Y S+ T+
Sbjct: 720 RLKVVTILTNEPALVIFDPQYPIELHTDASACGYGAILLHRI--ESKPHVIEYFSKTTTS 777
Query: 362 AQQKCSSYELEALAVIEGVKKFRRYLIGKPFKIVTDCEAFQKTLNKKDVSAKVARWILYL 541
+ + SYELE LAV++ VK FR YLIG+ F + TDC + + + K D++ +V RW YL
Sbjct: 778 VESRYHSYELETLAVVKAVKHFRHYLIGREFVVYTDCNSLKASRTKIDLTPRVHRWWAYL 837
Query: 542 QDFDFSIEHRTGDRMQHVDALSRNVL 619
Q F+F I++R G RM HVD LSRN L
Sbjct: 838 QSFNFEIQYREGKRMAHVDFLSRNPL 863
>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
Drosophila melanogastertransposable element 297. ).
Length = 1059
Score = 128 bits (310), Expect = 5e-30
Identities = 72/204 (35%), Positives = 110/204 (53%), Gaps = 2/204 (0%)
Frame = +2
Query: 5 KTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLKKGXXXXXXXXXXXX 184
K AI+++P+P KE+ +F+GLT Y+RKFI YA IAKP++ LKK
Sbjct: 425 KVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIE 484
Query: 185 XX--LKSKLCNNPVLKIFDIHLETELHTDASMYGYAAILLQRDPNDNCMHPVHYMSRKTS 358
LK+ + +P+L++ D + L TDAS A+L Q HP+ ++SR +
Sbjct: 485 AFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALGAVLSQNG------HPISFISRTLN 538
Query: 359 DAQQKCSSYELEALAVIEGVKKFRRYLIGKPFKIVTDCEAFQKTLNKKDVSAKVARWILY 538
D + S+ E E LA++ K FR YL+G+ F I +D + + N K+ AK+ RW +
Sbjct: 539 DHELNYSAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVR 598
Query: 539 LQDFDFSIEHRTGDRMQHVDALSR 610
L ++ F I++ G DALSR
Sbjct: 599 LSEYQFKIDYIKGKENSVADALSR 622
>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
Drosophila melanogastercopia-like element 17.6. ).
Length = 1058
Score = 126 bits (305), Expect = 2e-29
Identities = 73/205 (35%), Positives = 109/205 (53%), Gaps = 2/205 (0%)
Frame = +2
Query: 2 DKTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLKKGXXXXXXXXXXX 181
+K AI +P+P KE+ +F+GLT Y+RKFI +A IAKP++ LKK
Sbjct: 425 EKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYD 484
Query: 182 XXXLKSK--LCNNPVLKIFDIHLETELHTDASMYGYAAILLQRDPNDNCMHPVHYMSRKT 355
K K + +P+LK+ D + L TDAS A+L Q HP+ Y+SR
Sbjct: 485 SAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVALGAVLSQDG------HPLSYISRTL 538
Query: 356 SDAQQKCSSYELEALAVIEGVKKFRRYLIGKPFKIVTDCEAFQKTLNKKDVSAKVARWIL 535
++ + S+ E E LA++ K FR YL+G+ F+I +D + KD ++K+ RW +
Sbjct: 539 NEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPLSWLYRMKDPNSKLTRWRV 598
Query: 536 YLQDFDFSIEHRTGDRMQHVDALSR 610
L +FDF I++ G DALSR
Sbjct: 599 KLSEFDFDIKYIKGKENCVADALSR 623
>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
protein.
Length = 1006
Score = 126 bits (303), Expect = 3e-29
Identities = 74/205 (36%), Positives = 108/205 (52%), Gaps = 2/205 (0%)
Frame = +2
Query: 2 DKTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLKKGXXXXXXXXXXX 181
+K AI +P+P KE+ SF+GLT ++RKFI +A IAKPL+ LKK
Sbjct: 372 EKLRAIENYPLPTKPKEIKSFLGLTGFYRKFIPHFAQIAKPLTTCLKKDKKVDIKNPEYI 431
Query: 182 XXXLKSKLC--NNPVLKIFDIHLETELHTDASMYGYAAILLQRDPNDNCMHPVHYMSRKT 355
+ KL N+P+L+ D + L TDAS A+L Q HP+ Y+SR
Sbjct: 432 EAFKRLKLLISNDPILRSPDFKKKFVLTTDASNVALGAVLSQDG------HPISYISRTL 485
Query: 356 SDAQQKCSSYELEALAVIEGVKKFRRYLIGKPFKIVTDCEAFQKTLNKKDVSAKVARWIL 535
+D + S+ E E LA++ K FR YL+G+ F+I +D + K+ +AK+ RW
Sbjct: 486 NDHETNYSTIEKELLAIVWATKTFRHYLLGRHFEIASDHQPLCWLHKMKEPNAKLTRWKF 545
Query: 536 YLQDFDFSIEHRTGDRMQHVDALSR 610
L ++DF I++ G DALSR
Sbjct: 546 RLAEYDFDIKYVKGKENHVADALSR 570
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 125 bits (302), Expect = 4e-29
Identities = 76/204 (37%), Positives = 108/204 (52%), Gaps = 1/204 (0%)
Frame = +2
Query: 2 DKTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLK-KGXXXXXXXXXX 178
+K +AI FP P N + + SF+GL Y+RKFI +A I KP++ LK K
Sbjct: 534 NKISAIKKFPCPTNRRAIKSFLGLLGYYRKFIRDFARITKPMTKQLKGKRQVTTDKDFVD 593
Query: 179 XXXXLKSKLCNNPVLKIFDIHLETELHTDASMYGYAAILLQRDPNDNCMHPVHYMSRKTS 358
K+ L N+P+L D L TDAS + A+L Q ++ PV + SR S
Sbjct: 594 AFEQCKTLLSNDPILIHPDFEKPFILTTDASNFALGAVLSQGSLQND--RPVCFASRTLS 651
Query: 359 DAQQKCSSYELEALAVIEGVKKFRRYLIGKPFKIVTDCEAFQKTLNKKDVSAKVARWILY 538
D + S+ E E LA+I VK FR Y+ G F IVTD + +N K+ ++K+ RW L
Sbjct: 652 DTEVNYSTIEKEMLAIIWAVKYFRPYIYGVKFTIVTDHKPLIWLMNFKEPNSKIIRWRLQ 711
Query: 539 LQDFDFSIEHRTGDRMQHVDALSR 610
L +++F I H+ G + DALSR
Sbjct: 712 LMEYNFEIIHKKGSQNVIADALSR 735
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 122 bits (295), Expect = 3e-28
Identities = 71/205 (34%), Positives = 108/205 (52%), Gaps = 2/205 (0%)
Frame = +2
Query: 2 DKTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLKKGXXXXXXXXXXX 181
+K AI FP P + K + SF+GL Y+RKFI +A + +P++ L+
Sbjct: 420 NKIEAIKNFPCPHSKKSIKSFLGLLGYYRKFIRDFARLTQPMTQKLRGNNKSIIIDDEFK 479
Query: 182 XXX--LKSKLCNNPVLKIFDIHLETELHTDASMYGYAAILLQRDPNDNCMHPVHYMSRKT 355
K+ L N+P+L+ D L TDAS + A+L Q + + PV + SR
Sbjct: 480 KAFEYCKTLLSNDPILQYPDFTKPFTLTTDASNFAIGAVLSQGPVHSD--RPVCFASRTL 537
Query: 356 SDAQQKCSSYELEALAVIEGVKKFRRYLIGKPFKIVTDCEAFQKTLNKKDVSAKVARWIL 535
S A+ S+ E E LA+I V+ FR YL G+ F I+TD + +N K ++K+ RW L
Sbjct: 538 SAAETNYSTIEKEMLAIIWAVQYFRPYLFGRRFTIITDHKPLTWLMNFKQPNSKIVRWRL 597
Query: 536 YLQDFDFSIEHRTGDRMQHVDALSR 610
LQ++DF + ++ G + DALSR
Sbjct: 598 QLQEYDFEVVYKKGSQNVIADALSR 622
>AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein
protein.
Length = 849
Score = 122 bits (295), Expect = 3e-28
Identities = 71/205 (34%), Positives = 109/205 (53%), Gaps = 2/205 (0%)
Frame = +2
Query: 2 DKTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLKKGXXXXXXXXXXX 181
+K AI +P+P KE+ +F+G+T Y+RKFI ++ IAKPL+ LKKG
Sbjct: 387 EKIKAIQDYPLPSKPKEIKAFLGITGYYRKFIPNFSDIAKPLTKCLKKGVKIDTKHKEYI 446
Query: 182 XXXLKSKLC--NNPVLKIFDIHLETELHTDASMYGYAAILLQRDPNDNCMHPVHYMSRKT 355
K KL +P+LKI + + L TDAS A+L Q HP+ Y+SR
Sbjct: 447 EAFQKLKLLISEDPILKIPNFERKFVLTTDASNVALGAVLSQDG------HPISYISRTL 500
Query: 356 SDAQQKCSSYELEALAVIEGVKKFRRYLIGKPFKIVTDCEAFQKTLNKKDVSAKVARWIL 535
++ + S+ E E LA++ K FR YL+G+ +I +D + K+ ++K+ RW +
Sbjct: 501 NEHEVNYSAIEKELLAIVWATKTFRHYLLGRHCEIASDHQPLCWLHKLKEPNSKLTRWKI 560
Query: 536 YLQDFDFSIEHRTGDRMQHVDALSR 610
L ++DF I++ G DALSR
Sbjct: 561 RLSEYDFDIKYIKGKENHVADALSR 585
>AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein
protein.
Length = 1150
Score = 119 bits (287), Expect = 3e-27
Identities = 72/210 (34%), Positives = 109/210 (51%), Gaps = 2/210 (0%)
Frame = +2
Query: 2 DKTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLKKGXXXXXXXXXXX 181
+KT AI FP+PK K++ SF+GL ++RKFI +A I KP++ LKKG
Sbjct: 498 NKTKAITNFPLPKTPKQIKSFLGLCGFYRKFIPNFAKIVKPMTLKLKKGAIIDTKCKEYI 557
Query: 182 XXXLKSK--LCNNPVLKIFDIHLETELHTDASMYGYAAILLQRDPNDNCMHPVHYMSRKT 355
K K + ++P+L D L TDAS A+L Q PV Y SR
Sbjct: 558 ESFEKLKVLITSDPILIYPDFSKPFSLTTDASNVAIGAVLSQNHK------PVCYASRTL 611
Query: 356 SDAQQKCSSYELEALAVIEGVKKFRRYLIGKPFKIVTDCEAFQKTLNKKDVSAKVARWIL 535
++ + ++ E E LA++ K FR YL G+PF++++D + N K+ + K+ RW +
Sbjct: 612 NEHEINYATIEKELLAIVWATKYFRSYLFGRPFEVLSDHKPLVWLNNIKEPNMKLQRWKI 671
Query: 536 YLQDFDFSIEHRTGDRMQHVDALSRNVLFV 625
L +FD+ I++ G DALSR + V
Sbjct: 672 KLNEFDYKIKYLPGKENHVADALSRTKIEV 701
>AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse
transcriptase-like polymeraseprotein.
Length = 1059
Score = 118 bits (285), Expect = 5e-27
Identities = 76/216 (35%), Positives = 114/216 (52%), Gaps = 14/216 (6%)
Frame = +2
Query: 5 KTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLK------------KG 148
K AI FP+P+ LKE+ SF+GL+ Y+R+FI YA +AKPLS LL+ K
Sbjct: 414 KVQAISDFPIPRTLKELRSFLGLSGYYRRFIPNYAKLAKPLSSLLRGEDGRISRTLSSKK 473
Query: 149 XXXXXXXXXXXXXXLKSKLCNNPVLKIF-DIHLETELHTDASMYGYAAILLQRDPNDNCM 325
LKS L + V+ + D E L TDAS + A+L Q +
Sbjct: 474 SVSLNREAIEAFKKLKSSLVSPDVILHYPDFKKEFHLTTDASNFAVGAVLSQEN------ 527
Query: 326 HPVHYMSRKTSDAQQKCSSYELEALAVIEGVKKFRRYLIGKP-FKIVTDCEAFQKTLNKK 502
P+ ++SR S A++ ++ E E LA+I +KK + YL GK KI TD + +L+
Sbjct: 528 RPISFLSRTLSKAEENYATNEKEMLAIIWALKKLKIYLYGKAKVKIFTDHQPLTHSLSSW 587
Query: 503 DVSAKVARWILYLQDFDFSIEHRTGDRMQHVDALSR 610
+ +A++ RW YL+++D+ I ++ G DALSR
Sbjct: 588 NGNARIKRWKAYLEEYDYEIFYKPGRENTVADALSR 623
>AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed DNA
polymerase protein.
Length = 1065
Score = 116 bits (279), Expect = 3e-26
Identities = 70/204 (34%), Positives = 106/204 (51%), Gaps = 2/204 (0%)
Frame = +2
Query: 5 KTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLKKG--XXXXXXXXXX 178
K A++ FP+PK+ KE+ SF+GL ++RKFI +A IAKP++ LKKG
Sbjct: 414 KIKAVVNFPIPKSTKEIKSFLGLCGFYRKFIPNFAKIAKPMTLRLKKGSIINIKDSDYYL 473
Query: 179 XXXXLKSKLCNNPVLKIFDIHLETELHTDASMYGYAAILLQRDPNDNCMHPVHYMSRKTS 358
LK + ++P+L D L TDAS + A+L Q P+ Y SR +
Sbjct: 474 AFEKLKVLITSDPILIHPDFKKSFSLTTDASNFAIGAVLSQEH------KPICYASRTLN 527
Query: 359 DAQQKCSSYELEALAVIEGVKKFRRYLIGKPFKIVTDCEAFQKTLNKKDVSAKVARWILY 538
+ + S+ E E LA++ K FR YL G+ F+I +D + K+ + K+ RW +
Sbjct: 528 EHEVNYSAIEKELLAIVWATKYFRSYLFGRKFEIHSDHRPLVWLDSIKEPNMKLQRWKIK 587
Query: 539 LQDFDFSIEHRTGDRMQHVDALSR 610
L +FD+ I++ G DALSR
Sbjct: 588 LNEFDYHIKYLPGKENHVADALSR 611
>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
protein.
Length = 1037
Score = 103 bits (246), Expect = 3e-22
Identities = 68/206 (33%), Positives = 103/206 (50%), Gaps = 2/206 (0%)
Frame = +2
Query: 5 KTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLKKGXXXXXXXXXXXX 184
K +AI +P N K++ SF+G+T Y R++I+ Y+ IA+PL LKK
Sbjct: 351 KIDAICKINLPTNQKQIKSFLGITGYLRRYIKDYSKIAQPLIKYLKKNSKINTHDQXYVE 410
Query: 185 XXLKSKLC--NNPVLKIFDIHLETELHTDASMYGYAAILLQRDPNDNCMHPVHYMSRKTS 358
K K+ ++P++ D + + + TDAS Y A+L+Q DN + + Y SR
Sbjct: 411 AFQKLKILITSDPIVVYPDFNKQFTIVTDASNYALGAVLMQ----DNKV--ISYASRSLK 464
Query: 359 DAQQKCSSYELEALAVIEGVKKFRRYLIGKPFKIVTDCEAFQKTLNKKDVSAKVARWILY 538
+ + S+ E E LA+ K F+ Y+ G+ F I TD N K+ + K+ RW +
Sbjct: 465 NHELNYSTIEKELLAIYWSTKFFKYYIYGRKFIIKTDHRPLVWLNNLKEPNLKLQRWKVQ 524
Query: 539 LQDFDFSIEHRTGDRMQHVDALSRNV 616
L +FDF I G D LSR V
Sbjct: 525 LNEFDFDITFIKGKENALADGLSRIV 550
>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
Length = 1003
Score = 101 bits (243), Expect = 6e-22
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 13/215 (6%)
Frame = +2
Query: 5 KTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLK------------KG 148
K AI P P ++KE+ F+G+TSY+RKFI+ YA +AKPL++L + K
Sbjct: 342 KVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNLTRGLYANIKSSQSSKV 401
Query: 149 XXXXXXXXXXXXXXLKSKLCNNPVLKIFDIHLETELHTDASMYGYAAILLQRDPNDNCMH 328
LKS LC++ +L L TDAS + A+L Q D +
Sbjct: 402 PITLDETALQSFNDLKSILCSSEILAFPCFTKPFHLTTDASNWAIGAVLSQDDQGRD--R 459
Query: 329 PVHYMSRKTSDAQQKCSSYELEALAVIEGVKKFRRYLIGK-PFKIVTDCEAFQKTLNKKD 505
P+ Y+SR + ++ ++ E E LA+I + R YL G K+ TD + L ++
Sbjct: 460 PIAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLYGAGTIKVYTDHQPLTFALGNRN 519
Query: 506 VSAKVARWILYLQDFDFSIEHRTGDRMQHVDALSR 610
+AK+ RW +++++ + ++ G DALSR
Sbjct: 520 FNAKLKRWKARIEEYNCELIYKPGKSNVVADALSR 554
>AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed DNA
polymerase protein.
Length = 1013
Score = 97.1 bits (231), Expect = 2e-20
Identities = 73/222 (32%), Positives = 108/222 (48%), Gaps = 14/222 (6%)
Frame = +2
Query: 2 DKTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLK--KGXXXXXXXXX 175
+K AI FP PKN+ EV SF+GL SY+R FI+ +A IA+P+SD+LK G
Sbjct: 377 EKVKAIKEFPEPKNVFEVRSFLGLASYYRCFIKDFASIARPISDILKGENGSVSRHRSRS 436
Query: 176 XXXXXLKS------KLCN-----NPVLKIFDIHLETELHTDASMYGYAAILLQRDPNDNC 322
++ KL N + +L+ D +L TDAS YG A+L Q
Sbjct: 437 IQVEFSEAQQRAFEKLRNILASEDVILRYPDYKKAFDLTTDASAYGIGAVLSQEG----- 491
Query: 323 MHPVHYMSRKTSDAQQKCSSYELEALAVIEGVKKFRRYLIG-KPFKIVTDCEAFQKTLNK 499
P+ +SR SD + ++ E E LA++ + K R YL K I TD + +++
Sbjct: 492 -RPITMISRTLSDREVNYATNERELLAIVWALAKLRHYLYAVKEINIFTDHQPLTFAVSE 550
Query: 500 KDVSAKVARWILYLQDFDFSIEHRTGDRMQHVDALSRNVLFV 625
+ +AK+ RW + + I ++ G DALSR L V
Sbjct: 551 SNPNAKIKRWKARIDESGARIFYKPGRNNLVADALSRQQLNV 592
>U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse
transcriptase polyprotein protein.
Length = 1041
Score = 96.3 bits (229), Expect = 3e-20
Identities = 69/221 (31%), Positives = 106/221 (47%), Gaps = 14/221 (6%)
Frame = +2
Query: 5 KTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLK------------KG 148
K AI + P NL V SF+GL SY+R FI+ +A IA+PL+D+LK K
Sbjct: 407 KVEAIQKYNQPTNLFSVRSFLGLASYYRCFIKDFASIARPLTDILKGENGKVSASQSKKI 466
Query: 149 XXXXXXXXXXXXXXLKSKLCNNPVLKIF-DIHLETELHTDASMYGYAAILLQRDPNDNCM 325
LK+ L + V+ ++ D +L TDAS +G A+L Q
Sbjct: 467 PISFDERQCSAFEKLKNVLVSENVMLLYPDYRKAFDLTTDASAFGLGAVLSQDGK----- 521
Query: 326 HPVHYMSRKTSDAQQKCSSYELEALAVIEGVKKFRRYLIG-KPFKIVTDCEAFQKTLNKK 502
PV +SR D + ++ E E LA++ +K R YL G K I TD + ++ +
Sbjct: 522 -PVTMISRTLQDRELNFATNERELLAIVWALKSLRNYLYGVKNLNIFTDHQPLTYAVSDR 580
Query: 503 DVSAKVARWILYLQDFDFSIEHRTGDRMQHVDALSRNVLFV 625
+ +AK+ RW ++ + + I ++ G DALSR + V
Sbjct: 581 NPNAKIKRWKAFIDEHNAKIFYKPGKETYVADALSRQAIHV 621
>AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprotein
protein.
Length = 437
Score = 91.9 bits (218), Expect = 7e-19
Identities = 64/185 (34%), Positives = 95/185 (51%), Gaps = 14/185 (7%)
Frame = +2
Query: 5 KTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLK------------KG 148
K AI FP+P+ LKE+ SF+GL+ Y+R+FI YA +AKPLS LL+ K
Sbjct: 258 KVQAISDFPIPRTLKELRSFLGLSGYYRRFIPNYAKLAKPLSSLLRGEDGRISRTLSSKK 317
Query: 149 XXXXXXXXXXXXXXLKSKLCNNPVLKIF-DIHLETELHTDASMYGYAAILLQRDPNDNCM 325
LKS L + V+ + D E L TDAS + A+L Q +
Sbjct: 318 SVSLNREAIEAFKKLKSSLVSPDVILHYPDFKKEFHLTTDASNFAVGAVLSQEN------ 371
Query: 326 HPVHYMSRKTSDAQQKCSSYELEALAVIEGVKKFRRYLIGK-PFKIVTDCEAFQKTLNKK 502
P+ ++SR S A++ ++ E E LA+I +KK + YL GK KI TD + +L+
Sbjct: 372 RPISFLSRTLSKAEENYATNEKEMLAIIWALKKLKIYLYGKAKVKIFTDHQPLTHSLSSW 431
Query: 503 DVSAK 517
+ +A+
Sbjct: 432 NGNAE 436
>AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p protein.
Length = 825
Score = 91.5 bits (217), Expect = 9e-19
Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 2/204 (0%)
Frame = +2
Query: 5 KTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLKKG-XXXXXXXXXXX 181
K +AI +PVP + F+ +Y+R+FI+ +A ++ ++ L KK
Sbjct: 428 KYDAIQRYPVPTDADSARRFVAFCNYYRRFIQNFADYSRHITRLCKKNVKFEWTADCQHA 487
Query: 182 XXXLKSKLCNNPVLKIFDIHLETELHTDASMYGYAAILLQRDPNDNCMH-PVHYMSRKTS 358
LK +L N +LK D E + TDAS A+L Q N N +H PV Y SR +
Sbjct: 488 FEHLKKQLMNPTLLKYPDFSKEFCIITDASKEACGAVLTQ---NYNGIHLPVAYASRSFT 544
Query: 359 DAQQKCSSYELEALAVIEGVKKFRRYLIGKPFKIVTDCEAFQKTLNKKDVSAKVARWILY 538
+ S+ E E A+ + F+ Y+ G+ F + TD + + S+K+ R L
Sbjct: 545 KGESNKSTTEQELSAIHWAINHFKPYIYGRHFTVKTDHRPLTYLFSMVNPSSKLTRMRLD 604
Query: 539 LQDFDFSIEHRTGDRMQHVDALSR 610
L++++F++E+ G DALSR
Sbjct: 605 LEEYEFTVEYLKGKDNYVADALSR 628
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 89.0 bits (211), Expect = 5e-18
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 1/203 (0%)
Frame = +2
Query: 5 KTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLKKG-XXXXXXXXXXX 181
K + I +PVP + F+ +Y+R+FI+ +A ++ ++ L KK
Sbjct: 534 KYDVIQNYPVPHDADSARRFVAFCNYYRRFIKNFADYSRHITRLCKKNVPFEWTDECQKA 593
Query: 182 XXXLKSKLCNNPVLKIFDIHLETELHTDASMYGYAAILLQRDPNDNCMHPVHYMSRKTSD 361
LKS+L N +L+ D E + TDAS A+L Q ++ PV Y SR +
Sbjct: 594 FIHLKSQLINPTLLQYPDFSKEFCITTDASKQACGAVLTQN--HNGHQLPVAYASRAFTK 651
Query: 362 AQQKCSSYELEALAVIEGVKKFRRYLIGKPFKIVTDCEAFQKTLNKKDVSAKVARWILYL 541
+ S+ E E A+ + FR Y+ GK F + TD + + S+K+ R L L
Sbjct: 652 GESNKSTTEQELAAIHWAIIHFRPYIYGKHFTVKTDHRPLTYLFSMVNPSSKLTRIRLEL 711
Query: 542 QDFDFSIEHRTGDRMQHVDALSR 610
++++F++E+ G DALSR
Sbjct: 712 EEYNFTVEYLKGKDNHVADALSR 734
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent
DNA polymerase protein.
Length = 1000
Score = 89.0 bits (211), Expect = 5e-18
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 1/203 (0%)
Frame = +2
Query: 5 KTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLKKG-XXXXXXXXXXX 181
K + I +PVP + F+ +Y+R+FI+ +A ++ ++ L KK
Sbjct: 297 KYDVIQNYPVPHDADSARRFVAFCNYYRRFIKNFADYSRHITRLCKKNVPFEWTDECQKA 356
Query: 182 XXXLKSKLCNNPVLKIFDIHLETELHTDASMYGYAAILLQRDPNDNCMHPVHYMSRKTSD 361
LKS+L N +L+ D E + TDAS A+L Q ++ PV Y SR +
Sbjct: 357 FIHLKSQLINPTLLQYPDFSKEFCITTDASKQACGAVLTQN--HNGHQLPVAYASRAFTK 414
Query: 362 AQQKCSSYELEALAVIEGVKKFRRYLIGKPFKIVTDCEAFQKTLNKKDVSAKVARWILYL 541
+ S+ E E A+ + FR Y+ GK F + TD + + S+K+ R L L
Sbjct: 415 GESNKSTTEQELAAIHWAIIHFRPYIYGKHFTVKTDHRPLTYLFSMVNPSSKLTRIRLEL 474
Query: 542 QDFDFSIEHRTGDRMQHVDALSR 610
++++F++E+ G DALSR
Sbjct: 475 EEYNFTVEYLKGKDNHVADALSR 497
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 88.6 bits (210), Expect = 6e-18
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 1/203 (0%)
Frame = +2
Query: 5 KTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLKKGXXXXXXXXXXXX 184
K I +P+P + F+ +Y+R+FI+ ++ ++ L+ L KK
Sbjct: 289 KYEVIEKYPIPTDADSARRFVAFCNYYRRFIKNFSDHSRHLTRLCKKNVQFEWTAECNDA 348
Query: 185 XX-LKSKLCNNPVLKIFDIHLETELHTDASMYGYAAILLQRDPNDNCMHPVHYMSRKTSD 361
LK++L +L+ D E + TDAS A+L Q D N + PV Y SR +
Sbjct: 349 FEYLKTELMKPTLLQYPDFGKEFCITTDASKQACGAVLTQ-DHNGQQL-PVAYASRMFTQ 406
Query: 362 AQQKCSSYELEALAVIEGVKKFRRYLIGKPFKIVTDCEAFQKTLNKKDVSAKVARWILYL 541
+ S+ E E A+ + FR Y+ GK F + +D + K+ S+K+ R L L
Sbjct: 407 GESNKSTTEQELTAIHWAINHFRPYIYGKHFMVKSDHRPLSYLFSMKNPSSKLTRMRLDL 466
Query: 542 QDFDFSIEHRTGDRMQHVDALSR 610
+++DF++E+ G DALSR
Sbjct: 467 EEYDFTVEYLKGKDNHIADALSR 489
>AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein
protein.
Length = 826
Score = 87.8 bits (208), Expect = 1e-17
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 1/203 (0%)
Frame = +2
Query: 5 KTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLKKGXXXXXXXXXXXX 184
K + I +PVP + F+ +Y+R+FI +A ++ ++ L KK
Sbjct: 123 KYDVIKNYPVPHDADSARRFVAFCNYYRRFIRNFADYSRHITRLCKKNVPFEWSSECQNA 182
Query: 185 XX-LKSKLCNNPVLKIFDIHLETELHTDASMYGYAAILLQRDPNDNCMHPVHYMSRKTSD 361
LK L + +L+ D E + TDAS A+L Q + P+ Y SR +
Sbjct: 183 FEYLKENLMHPTLLQYPDFRKEFCIITDASKQACGAVLTQN--RNGIQLPIAYASRSFTK 240
Query: 362 AQQKCSSYELEALAVIEGVKKFRRYLIGKPFKIVTDCEAFQKTLNKKDVSAKVARWILYL 541
+ S+ E E A+ + FR Y+ GK F I TD + + S+K+ R L L
Sbjct: 241 GESNKSTTEQELAAIHWAITHFRPYIYGKHFTIKTDHRPLTYLFSMTNPSSKLTRMRLEL 300
Query: 542 QDFDFSIEHRTGDRMQHVDALSR 610
+++DF++E+ G DALSR
Sbjct: 301 EEYDFTVEYLRGKDNFVADALSR 323
>AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 826
Score = 86.6 bits (205), Expect = 2e-17
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 1/203 (0%)
Frame = +2
Query: 5 KTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLKKGXXXXXXXXXXXX 184
K + I +PVP + F+ +Y+R+FI +A ++ ++ L KK
Sbjct: 123 KYDVIKNYPVPHDADSARRFVAFCNYYRRFIRNFADYSRHITRLCKKNVPFEWSSEYQNA 182
Query: 185 XX-LKSKLCNNPVLKIFDIHLETELHTDASMYGYAAILLQRDPNDNCMHPVHYMSRKTSD 361
LK L +L+ D E + TDAS A+L Q + P+ Y SR +
Sbjct: 183 FEYLKENLMYPTLLQYPDFRKEFCIITDASKQACGAVLTQN--RNGIQLPIAYASRSFTK 240
Query: 362 AQQKCSSYELEALAVIEGVKKFRRYLIGKPFKIVTDCEAFQKTLNKKDVSAKVARWILYL 541
+ S+ E E A+ + FR Y+ GK F I TD + + S+K+ R L L
Sbjct: 241 GESNKSTTEQELAAIHWAITHFRPYIYGKHFTIKTDHRPLTYLFSMTNPSSKLTRMRLEL 300
Query: 542 QDFDFSIEHRTGDRMQHVDALSR 610
+++DF++E+ G DALSR
Sbjct: 301 EEYDFTVEYLRGKDNFVADALSR 323
>M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein
protein.
Length = 1010
Score = 86.2 bits (204), Expect = 3e-17
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Frame = +2
Query: 2 DKTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLK------------K 145
+K AI +P P + +V SF+GL SY+R FI+ +A IA+P++D+LK K
Sbjct: 375 EKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKK 434
Query: 146 GXXXXXXXXXXXXXXLKSKLCNNPV-LKIFDIHLETELHTDASMYGYAAILLQRDPNDNC 322
L++ L + V LK D +L TDAS G A+L Q
Sbjct: 435 IPVEFNETQRNAFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEG----- 489
Query: 323 MHPVHYMSRKTSDAQQKCSSYELEALAVIEGVKKFRRYLIG-KPFKIVTDCEAFQKTLNK 499
P+ +SR +Q ++ E E LA++ + K + +L G + I TD + +
Sbjct: 490 -RPITMISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVAD 548
Query: 500 KDVSAKVARWILYLQDFDFSIEHRTGDRMQHVDALSRNVL 619
++ +AK+ RW Y+ + + ++ G DALSR L
Sbjct: 549 RNTNAKIKRWKSYIDQHNAKVFYKPGKENFVADALSRQNL 588
>EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 86.2 bits (204), Expect = 3e-17
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Frame = +2
Query: 2 DKTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLK------------K 145
+K AI +P P + +V SF+GL SY+R FI+ +A IA+P++D+LK K
Sbjct: 410 EKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKK 469
Query: 146 GXXXXXXXXXXXXXXLKSKLCNNPV-LKIFDIHLETELHTDASMYGYAAILLQRDPNDNC 322
L++ L + V LK D +L TDAS G A+L Q
Sbjct: 470 IPVEFNETQRNAFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEG----- 524
Query: 323 MHPVHYMSRKTSDAQQKCSSYELEALAVIEGVKKFRRYLIG-KPFKIVTDCEAFQKTLNK 499
P+ +SR +Q ++ E E LA++ + K + +L G + I TD + +
Sbjct: 525 -RPITMISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVAD 583
Query: 500 KDVSAKVARWILYLQDFDFSIEHRTGDRMQHVDALSRNVL 619
++ +AK+ RW Y+ + + ++ G DALSR L
Sbjct: 584 RNTNAKIKRWKSYIDQHNAKVFYKPGKENFVADALSRQNL 623
>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 86.2 bits (204), Expect = 3e-17
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Frame = +2
Query: 2 DKTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLK------------K 145
+K AI +P P + +V SF+GL SY+R FI+ +A IA+P++D+LK K
Sbjct: 410 EKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKK 469
Query: 146 GXXXXXXXXXXXXXXLKSKLCNNPV-LKIFDIHLETELHTDASMYGYAAILLQRDPNDNC 322
L++ L + V LK D +L TDAS G A+L Q
Sbjct: 470 IPVEFNETQRNAFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEG----- 524
Query: 323 MHPVHYMSRKTSDAQQKCSSYELEALAVIEGVKKFRRYLIG-KPFKIVTDCEAFQKTLNK 499
P+ +SR +Q ++ E E LA++ + K + +L G + I TD + +
Sbjct: 525 -RPITMISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVAD 583
Query: 500 KDVSAKVARWILYLQDFDFSIEHRTGDRMQHVDALSRNVL 619
++ +AK+ RW Y+ + + ++ G DALSR L
Sbjct: 584 RNTNAKIKRWKSYIDQHNAKVFYKPGKENFVADALSRQNL 623
>DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 86.2 bits (204), Expect = 3e-17
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Frame = +2
Query: 2 DKTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLK------------K 145
+K AI +P P + +V SF+GL SY+R FI+ +A IA+P++D+LK K
Sbjct: 375 EKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKK 434
Query: 146 GXXXXXXXXXXXXXXLKSKLCNNPV-LKIFDIHLETELHTDASMYGYAAILLQRDPNDNC 322
L++ L + V LK D +L TDAS G A+L Q
Sbjct: 435 IPVEFNETQRNAFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEG----- 489
Query: 323 MHPVHYMSRKTSDAQQKCSSYELEALAVIEGVKKFRRYLIG-KPFKIVTDCEAFQKTLNK 499
P+ +SR +Q ++ E E LA++ + K + +L G + I TD + +
Sbjct: 490 -RPITMISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVAD 548
Query: 500 KDVSAKVARWILYLQDFDFSIEHRTGDRMQHVDALSRNVL 619
++ +AK+ RW Y+ + + ++ G DALSR L
Sbjct: 549 RNTNAKIKRWKSYIDQHNAKVFYKPGKENFVADALSRQNL 588
>DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 86.2 bits (204), Expect = 3e-17
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Frame = +2
Query: 2 DKTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLK------------K 145
+K AI +P P + +V SF+GL SY+R FI+ +A IA+P++D+LK K
Sbjct: 375 EKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKK 434
Query: 146 GXXXXXXXXXXXXXXLKSKLCNNPV-LKIFDIHLETELHTDASMYGYAAILLQRDPNDNC 322
L++ L + V LK D +L TDAS G A+L Q
Sbjct: 435 IPVEFNETQRNAFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEG----- 489
Query: 323 MHPVHYMSRKTSDAQQKCSSYELEALAVIEGVKKFRRYLIG-KPFKIVTDCEAFQKTLNK 499
P+ +SR +Q ++ E E LA++ + K + +L G + I TD + +
Sbjct: 490 -RPITMISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVAD 548
Query: 500 KDVSAKVARWILYLQDFDFSIEHRTGDRMQHVDALSRNVL 619
++ +AK+ RW Y+ + + ++ G DALSR L
Sbjct: 549 RNTNAKIKRWKSYIDQHNAKVFYKPGKENFVADALSRQNL 588
>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
protein.
Length = 1463
Score = 86.2 bits (204), Expect = 3e-17
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Frame = +2
Query: 2 DKTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLK------------K 145
+K AI +P P + +V SF+GL SY+R FI+ +A IA+P++D+LK K
Sbjct: 828 EKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKK 887
Query: 146 GXXXXXXXXXXXXXXLKSKLCNNPV-LKIFDIHLETELHTDASMYGYAAILLQRDPNDNC 322
L++ L + V LK D +L TDAS G A+L Q
Sbjct: 888 IPVEFNETQRNAFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEG----- 942
Query: 323 MHPVHYMSRKTSDAQQKCSSYELEALAVIEGVKKFRRYLIG-KPFKIVTDCEAFQKTLNK 499
P+ +SR +Q ++ E E LA++ + K + +L G + I TD + +
Sbjct: 943 -RPITMISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVAD 1001
Query: 500 KDVSAKVARWILYLQDFDFSIEHRTGDRMQHVDALSRNVL 619
++ +AK+ RW Y+ + + ++ G DALSR L
Sbjct: 1002 RNTNAKIKRWKSYIDQHNAKVFYKPGKENFVADALSRQNL 1041
>X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D.
melanogaster retrotransposongypsy gene fragment for
reverse transcriptase-like enzyme.).
Length = 930
Score = 84.2 bits (199), Expect = 1e-16
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 14/220 (6%)
Frame = +2
Query: 2 DKTNAIMTFPVPKNLKEVHSFIGLTSYFRKFIEKYALIAKPLSDLLK------------K 145
+K AI +P P + +V SF+GL SY+R FI+ +A IA+P++D+LK K
Sbjct: 380 EKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKK 439
Query: 146 GXXXXXXXXXXXXXXLKSKLCNNPVLKIFDIHLET-ELHTDASMYGYAAILLQRDPNDNC 322
L++ L + V+ + + + +L TDAS G A+L Q
Sbjct: 440 IPVEFNETQRNAFQRLRNILASEDVILKYPVFKKPFDLTTDASASGIGAVLSQEG----- 494
Query: 323 MHPVHYMSRKTSDAQQKCSSYELEALAVIEGVKKFRRYLIG-KPFKIVTDCEAFQKTLNK 499
P+ +SR +Q ++ E E LA++ + K + +L G + I TD + +
Sbjct: 495 -RPITMISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVAD 553
Query: 500 KDVSAKVARWILYLQDFDFSIEHRTGDRMQHVDALSRNVL 619
++ +AK+ RW Y+ + + ++ G DALSR L
Sbjct: 554 RNTNAKIKRWKSYIDQHNAKVFYKPGKENFVADALSRQNL 593
>S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotein
protein.
Length = 624
Score = 60.5 bits (140), Expect = 2e-09
Identities = 38/117 (32%), Positives = 60/117 (51%)
Frame = +2
Query: 260 TDASMYGYAAILLQRDPNDNCMHPVHYMSRKTSDAQQKCSSYELEALAVIEGVKKFRRYL 439
TDAS A+L Q D N + PV Y SR + + S+ E E A+ + FR Y+
Sbjct: 7 TDASKQACGAVLSQ-DHNGQQL-PVAYASRSFTKGESNKSTTEQELAAIHWAINHFRPYV 64
Query: 440 IGKPFKIVTDCEAFQKTLNKKDVSAKVARWILYLQDFDFSIEHRTGDRMQHVDALSR 610
G+ F + +D + ++ S+K+ R L L++F+F++E+ G DALSR
Sbjct: 65 YGRHFLVQSDHRPLSYLFSMRNPSSKLTRMRLDLEEFEFTVEYLKGKDNHVADALSR 121
>AE014298-2529|AAN09434.1| 1370|Drosophila melanogaster CG32562-PA
protein.
Length = 1370
Score = 28.3 bits (60), Expect = 9.1
Identities = 21/96 (21%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Frame = +2
Query: 233 DIHLETELHTDAS--MYGYAAILLQRDPNDNCMHPVHYMSRKTSDAQQKCSSYELEALAV 406
++ ET LH S M+ I ++DP + H++ +T +++ + EL +L
Sbjct: 256 ELRNETALHMTMSYLMHEIMDISERQDPQSHMGDWFHFVWDRTRSIRKEITQQELCSLGA 315
Query: 407 IEGVKKFRRYLIGKPFKIV-TDCEAFQKTLNKKDVS 511
++ V++ R+ I ++V D F +N ++++
Sbjct: 316 VKLVEQCARFHIHCAARLVDADPSVFDSKINAENLT 351
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,222,368
Number of Sequences: 53049
Number of extensions: 449795
Number of successful extensions: 1476
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1437
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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