Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23i16
         (347 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y07759-2|CAA69036.1| 1828|Homo sapiens mysoin heavy chain 12 pro...    28   9.3  
Y07759-1|CAA69035.1| 1855|Homo sapiens mysoin heavy chain 12 pro...    28   9.3  
U90942-1|AAD00702.1| 1855|Homo sapiens myosin heavy chain 12 pro...    28   9.3  
AL731557-4|CAI14827.2|  384|Homo sapiens potassium channel, subf...    28   9.3  
AB087138-1|BAC78527.1|  384|Homo sapiens TWIK-related individual...    28   9.3  

>Y07759-2|CAA69036.1| 1828|Homo sapiens mysoin heavy chain 12
           protein.
          Length = 1828

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -3

Query: 126 GFNDRKEKAHSIYIFKIQEISFGVVQDIFRIICQILHI 13
           G +D KE AH+     +  IS      IFRI+  ILH+
Sbjct: 298 GVDDAKEMAHTRQACTLLGISESHQMGIFRILAGILHL 335


>Y07759-1|CAA69035.1| 1855|Homo sapiens mysoin heavy chain 12
           protein.
          Length = 1855

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -3

Query: 126 GFNDRKEKAHSIYIFKIQEISFGVVQDIFRIICQILHI 13
           G +D KE AH+     +  IS      IFRI+  ILH+
Sbjct: 298 GVDDAKEMAHTRQACTLLGISESHQMGIFRILAGILHL 335


>U90942-1|AAD00702.1| 1855|Homo sapiens myosin heavy chain 12
           protein.
          Length = 1855

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -3

Query: 126 GFNDRKEKAHSIYIFKIQEISFGVVQDIFRIICQILHI 13
           G +D KE AH+     +  IS      IFRI+  ILH+
Sbjct: 298 GVDDAKEMAHTRQACTLLGISESHQMGIFRILAGILHL 335


>AL731557-4|CAI14827.2|  384|Homo sapiens potassium channel,
           subfamily K, member 18 protein.
          Length = 384

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
 Frame = -2

Query: 346 FFFMYKQLITILFHNSCSHFPNFNLFFHLV----LQKVLISRKLV 224
           F+F +  L TI F ++    PNF LFF +     ++ V I+ KLV
Sbjct: 314 FYFCFVTLTTIGFGDTVLEHPNFFLFFSIYIIVGMEIVFIAFKLV 358


>AB087138-1|BAC78527.1|  384|Homo sapiens TWIK-related individual K+
           channel protein.
          Length = 384

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
 Frame = -2

Query: 346 FFFMYKQLITILFHNSCSHFPNFNLFFHLV----LQKVLISRKLV 224
           F+F +  L TI F ++    PNF LFF +     ++ V I+ KLV
Sbjct: 314 FYFCFVTLTTIGFGDTVLEHPNFFLFFSIYIIVGMEIVFIAFKLV 358


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,859,996
Number of Sequences: 237096
Number of extensions: 570002
Number of successful extensions: 1262
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1262
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)