Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23i12
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical pr... 36 0.033
Z92831-6|CAB07365.2| 355|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z92777-12|CAJ58496.1| 355|Caenorhabditis elegans Hypothetical p... 31 0.94
AL032637-13|CAA21615.1| 709|Caenorhabditis elegans Hypothetical... 29 2.2
Z46242-9|CAA86334.2| 491|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF067950-2|AAG24155.2| 365|Caenorhabditis elegans Serpentine re... 29 2.9
Z81513-2|CAB04186.2| 489|Caenorhabditis elegans Hypothetical pr... 29 3.8
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 29 3.8
U00064-1|AAD31935.1| 845|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF515833-1|AAM55225.1| 489|Caenorhabditis elegans synaptonemal ... 29 3.8
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 29 3.8
Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z68161-6|CAA92295.2| 782|Caenorhabditis elegans Hypothetical pr... 28 5.0
AF101318-7|AAC69345.1| 826|Caenorhabditis elegans Hypothetical ... 28 5.0
AB017106-1|BAA88837.1| 607|Caenorhabditis elegans Kinesin like ... 28 5.0
Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical pr... 28 6.7
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 28 6.7
U58732-6|AAB00596.3| 333|Caenorhabditis elegans Serpentine rece... 28 6.7
U42847-2|AAA83604.3| 430|Caenorhabditis elegans Hypothetical pr... 27 8.8
AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical ... 27 8.8
>U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical
protein R09H3.1 protein.
Length = 1073
Score = 35.5 bits (78), Expect = 0.033
Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 6/135 (4%)
Frame = +1
Query: 193 ECFTKINGILKFREACKIVEYQLIQLKNKLQKSELHFANDSEQAKLNDASENTHGYKTII 372
E K + K +A K E L ++S + D ++ L + G T+I
Sbjct: 176 ELALKDENLKKAEQASKANEKVSKDLSETEKRSIIQSGRDDQEKTLEAIKKLVLGMSTLI 235
Query: 373 QTDNDCVTKKEEKILECLMENDEINNSLDSENSITNTFETAVH------ILGTNKPNASF 534
T+N+ T +++ EN + +S ++N T + + I + + N +F
Sbjct: 236 DTNNETHTALMKELYN--RENQKAQHSRATDNQSTEFIQPDIKNVYKLLIQFSGEENENF 293
Query: 535 ESSDELFKANDVNNR 579
E E FK N +NNR
Sbjct: 294 EFFHENFKENVLNNR 308
>Z92831-6|CAB07365.2| 355|Caenorhabditis elegans Hypothetical
protein F22G12.1 protein.
Length = 355
Score = 30.7 bits (66), Expect = 0.94
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Frame = +1
Query: 241 KIVEYQLIQLKNKLQKS--ELHFANDS-EQAKLNDASENTHGYKTIIQTDNDCVTKKEEK 411
K +E +L +K K +K E+ ++ E+ + D + + + +T + + KK ++
Sbjct: 91 KKLESELESIKRKGEKDVREIEQQREALEKQRTEDLVNHQETMRKLNETKFEAIKKKRDE 150
Query: 412 ILECLMEN-DEINN--SLDSENSITNTFETAVHILGTNKPNASFESSDELFKANDVNNRV 582
ME DE + +++ + +TN +T LG NAS +L + DV N+
Sbjct: 151 QQTLKMEEMDEKSKRMAIEHQTRMTNIEDTQNMQLGIESSNASLAMIKKLKNSIDVVNKT 210
Query: 583 T 585
T
Sbjct: 211 T 211
>Z92777-12|CAJ58496.1| 355|Caenorhabditis elegans Hypothetical
protein F22G12.1 protein.
Length = 355
Score = 30.7 bits (66), Expect = 0.94
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Frame = +1
Query: 241 KIVEYQLIQLKNKLQKS--ELHFANDS-EQAKLNDASENTHGYKTIIQTDNDCVTKKEEK 411
K +E +L +K K +K E+ ++ E+ + D + + + +T + + KK ++
Sbjct: 91 KKLESELESIKRKGEKDVREIEQQREALEKQRTEDLVNHQETMRKLNETKFEAIKKKRDE 150
Query: 412 ILECLMEN-DEINN--SLDSENSITNTFETAVHILGTNKPNASFESSDELFKANDVNNRV 582
ME DE + +++ + +TN +T LG NAS +L + DV N+
Sbjct: 151 QQTLKMEEMDEKSKRMAIEHQTRMTNIEDTQNMQLGIESSNASLAMIKKLKNSIDVVNKT 210
Query: 583 T 585
T
Sbjct: 211 T 211
>AL032637-13|CAA21615.1| 709|Caenorhabditis elegans Hypothetical
protein Y43F8C.14 protein.
Length = 709
Score = 29.5 bits (63), Expect = 2.2
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Frame = +1
Query: 256 QLIQLKNKLQKSELHFANDSEQAKLNDASENTHGYKTIIQTDNDCVTKKEEKILECLMEN 435
+L L K+ K EL+ A+D +K ++ EN+ D+D +E +L+ ++EN
Sbjct: 147 KLRNLAQKMDKEELYVADDVGISKKSENFENS---------DDDVANFQELLVLDEVLEN 197
Query: 436 DEINNSL-----DSENSITNTFE 489
E + +L D E+++ TF+
Sbjct: 198 AENSENLESQQYDEESTLNRTFQ 220
>Z46242-9|CAA86334.2| 491|Caenorhabditis elegans Hypothetical
protein F35G12.12 protein.
Length = 491
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/73 (23%), Positives = 37/73 (50%)
Frame = +1
Query: 244 IVEYQLIQLKNKLQKSELHFANDSEQAKLNDASENTHGYKTIIQTDNDCVTKKEEKILEC 423
+V++ LI N+ KS+L AN E + + + + I ++ C+ +KIL+
Sbjct: 145 LVDHDLI---NEELKSQLSVANGRESSSIRSRIYSIATERARISSNTSCIHWLYDKILKS 201
Query: 424 LMENDEINNSLDS 462
+++ ++ LD+
Sbjct: 202 VLDTQDVLAQLDA 214
>AF067950-2|AAG24155.2| 365|Caenorhabditis elegans Serpentine
receptor, class w protein143 protein.
Length = 365
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/71 (23%), Positives = 33/71 (46%)
Frame = +1
Query: 139 FYWIKVERNDGLPQNICEECFTKINGILKFREACKIVEYQLIQLKNKLQKSELHFANDSE 318
FY++ + + + + +T IN ++ C I + L +L K+E +
Sbjct: 200 FYYLDISASYKQNDGMILKIYTLINSVVSTIIPCFIFPIVTVFLVKELWKAEANRKRLFS 259
Query: 319 QAKLNDASENT 351
K+ND+S+NT
Sbjct: 260 SKKVNDSSKNT 270
>Z81513-2|CAB04186.2| 489|Caenorhabditis elegans Hypothetical
protein F26D2.2 protein.
Length = 489
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/58 (22%), Positives = 29/58 (50%)
Frame = +1
Query: 226 FREACKIVEYQLIQLKNKLQKSELHFANDSEQAKLNDASENTHGYKTIIQTDNDCVTK 399
F+E+CK +E QL+ +K + + ++ LN+A ++ ++ + +TK
Sbjct: 86 FKESCKSIELQLVSVKKSI-PDRTKLQSGEKEKSLNEADYELSKFEDLLSSRERELTK 142
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 28.7 bits (61), Expect = 3.8
Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Frame = +1
Query: 256 QLIQLKNKLQK-SELHFANDSEQAKLNDASENTHGYKTIIQTDNDCVTKKEEKILECLME 432
++ +++N +++ ++ A + E +LN E + K + + +ND E LE M
Sbjct: 234 EMSEMRNNIERLQKMEKALERENERLNHQKELSDKLKVVNEENNDLRQNLAENHLELAMI 293
Query: 433 NDEINNSLDSENSITNTFETAVHILGTNKPNASFESSDELFKANDVNNRVTCKL 594
E+ + + IL +P S SSD+ A + + V +L
Sbjct: 294 KSELAQVRCEFDQKQDELSARRGILFQLEPINSLSSSDQASHATEESESVRKQL 347
>U00064-1|AAD31935.1| 845|Caenorhabditis elegans Hypothetical
protein ZC155.3 protein.
Length = 845
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 346 NTHGYKTIIQTDNDC--VTKKEEKILECLMENDEINNSLDSENSI 474
N HG +TI+ DND + +K + IL + +S DS+NSI
Sbjct: 541 NHHGCRTIVAEDNDFSKLPEKYDHILPQKRLTNSAPSSSDSQNSI 585
>AF515833-1|AAM55225.1| 489|Caenorhabditis elegans synaptonemal
complex protein SYP-1 protein.
Length = 489
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/58 (22%), Positives = 29/58 (50%)
Frame = +1
Query: 226 FREACKIVEYQLIQLKNKLQKSELHFANDSEQAKLNDASENTHGYKTIIQTDNDCVTK 399
F+E+CK +E QL+ +K + + ++ LN+A ++ ++ + +TK
Sbjct: 86 FKESCKSIELQLVSVKKSI-PDRTKLQSGEKEKSLNEADYELSKFEDLLSSRERELTK 142
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +1
Query: 286 KSELHFANDSEQAKLNDASENTHGYKTII--QTDNDCVTKKEEKILECLMENDEINNSLD 459
KS HF N + + L ++ E + + K+ EK+ E +++ N +
Sbjct: 16 KSNAHFQNVNLKDLLLESEEAKENMPEEAPGEATEEKAEKESEKLSESSTDSNAAENLDN 75
Query: 460 SENSITNTFETAV 498
EN I +TF+TA+
Sbjct: 76 KENIIESTFKTAI 88
>Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical
protein F20C5.2b protein.
Length = 1130
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 223 KFREACKIVEYQLIQLKNKLQKSELHFANDSEQAKLNDASENTHGYKTIIQTDNDCVTKK 402
+F+E +++ QL Q K + + D+E+AKL D E ++I+ + D + ++
Sbjct: 346 EFQEEIEMLREQLKQRKTRSRDGATQSFYDAERAKLEDDIEAIQKDDSLIKHEKDRLIRE 405
Query: 403 -EEKILECLMENDEINNSLDSE 465
+EK L+E + I + +E
Sbjct: 406 IQEK--HDLLEKERIEQARVAE 425
>Z68161-6|CAA92295.2| 782|Caenorhabditis elegans Hypothetical
protein F20C5.2a protein.
Length = 782
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 223 KFREACKIVEYQLIQLKNKLQKSELHFANDSEQAKLNDASENTHGYKTIIQTDNDCVTKK 402
+F+E +++ QL Q K + + D+E+AKL D E ++I+ + D + ++
Sbjct: 360 EFQEEIEMLREQLKQRKTRSRDGATQSFYDAERAKLEDDIEAIQKDDSLIKHEKDRLIRE 419
Query: 403 -EEKILECLMENDEINNSLDSE 465
+EK L+E + I + +E
Sbjct: 420 IQEK--HDLLEKERIEQARVAE 439
>AF101318-7|AAC69345.1| 826|Caenorhabditis elegans Hypothetical
protein Y73C8C.3 protein.
Length = 826
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/75 (20%), Positives = 35/75 (46%)
Frame = +1
Query: 154 VERNDGLPQNICEECFTKINGILKFREACKIVEYQLIQLKNKLQKSELHFANDSEQAKLN 333
+ + + N C +CF +K RE ++ + + L+ L+ S+ +S+ K++
Sbjct: 546 IAKTEEKQSNACPKCFRASEYNIKLREDWRLEKIETKHLRKSLKLSQQESEENSQ--KIS 603
Query: 334 DASENTHGYKTIIQT 378
+ +E + +QT
Sbjct: 604 EKNEEIEHLRAQVQT 618
>AB017106-1|BAA88837.1| 607|Caenorhabditis elegans Kinesin like
protein (klp-11) protein.
Length = 607
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 223 KFREACKIVEYQLIQLKNKLQKSELHFANDSEQAKLNDASENTHGYKTIIQTDNDCVTKK 402
+F+E +++ QL Q K + + D+E+AKL D E ++I+ + D + ++
Sbjct: 309 EFQEEIEMLREQLKQRKTRSRDGATQSFYDAERAKLEDDIEAIQKDDSLIKHEKDRLIRE 368
Query: 403 -EEKILECLMENDEINNSLDSE 465
+EK L+E + I + +E
Sbjct: 369 IQEK--HDLLEKERIEQARVAE 388
>Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical
protein C14C10.5 protein.
Length = 1908
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = -2
Query: 642 PSHMGIHTANGQVLLTQLAGDTVINIIR 559
PS+ G+HT + VLL++L +T++ + R
Sbjct: 382 PSNNGLHTQHIMVLLSKLLSNTILRLKR 409
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter than
wild-typeprotein 6 protein.
Length = 1254
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/89 (21%), Positives = 38/89 (42%)
Frame = +1
Query: 283 QKSELHFANDSEQAKLNDASENTHGYKTIIQTDNDCVTKKEEKILECLMENDEINNSLDS 462
+K L +S +D+SE T + + ++ T ++EK+++ E + + +
Sbjct: 766 EKKRLLKEKESTSTTGSDSSETT---TVVAENIDEVTTTEKEKVVQTTPITTEKSTTQEE 822
Query: 463 ENSITNTFETAVHILGTNKPNASFESSDE 549
+ T T E T KP S ++ E
Sbjct: 823 TTTTTTTTEKTTSKTTTEKPTTSESATTE 851
>U58732-6|AAB00596.3| 333|Caenorhabditis elegans Serpentine
receptor, class v protein5, isoform a protein.
Length = 333
Score = 27.9 bits (59), Expect = 6.7
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Frame = -2
Query: 234 FPKFKYTINFCETFLTYVLG*PIISFYLNPVEKSISSYFFQ*KI-----YMKF-LENIWE 73
F +F T+ F + Y P F+ + + +S + + KI Y+ F L +
Sbjct: 54 FVEFSITMRFRKYSSLYAFFEPDTEFH-GIIPRIVSGFHYYIKIVVYIGYLTFALNRLTS 112
Query: 72 YLNVSSLKLLFTEILLNCVKIIK 4
LN+SS ++T LL V+I+K
Sbjct: 113 ALNISSYNSIWTPKLLQRVRIVK 135
>U42847-2|AAA83604.3| 430|Caenorhabditis elegans Hypothetical
protein F39H12.1 protein.
Length = 430
Score = 27.5 bits (58), Expect = 8.8
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Frame = +1
Query: 256 QLIQLKNKLQKSELHFANDSEQ--AKLNDASENTHGYKT----IIQTDNDCVTKKEEKIL 417
Q+ Q+K LQK+E F +D E A++ + EN K+ IIQ +C K E+
Sbjct: 248 QISQMKGALQKTEETFISDFETFGAEIKRSLENQAKRKSSSPKIIQLPCNCENKSREQTN 307
Query: 418 ECLMENDE 441
+ ++++DE
Sbjct: 308 Q-VVKHDE 314
>AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical
protein M151.2 protein.
Length = 675
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +1
Query: 265 QLKNKLQKSELHFANDSEQAKLNDASENTHGYKTIIQTDNDCVTKKEEKILECLMENDEI 444
+L+ KLQ E + E AK A+E + + ++ + K E++ +EN E+
Sbjct: 159 ELQAKLQTVEKEHKKEIEDAKEALAAEKQNSEREKME-----LKKLTEELQRMNLENKEL 213
Query: 445 NNSLDSENS 471
N + SENS
Sbjct: 214 KNRVASENS 222
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,955,919
Number of Sequences: 27780
Number of extensions: 314322
Number of successful extensions: 1047
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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