Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23i11
(245 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 22 0.97
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 0.97
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 21 1.7
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 21 1.7
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 21 2.2
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 21 3.0
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 20 3.9
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 20 3.9
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 20 5.2
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 20 5.2
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 20 5.2
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 19 6.9
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 19 6.9
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 22.2 bits (45), Expect = 0.97
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -2
Query: 49 MHLSYEHLWLP 17
+H+ EH+WLP
Sbjct: 95 LHVPSEHIWLP 105
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.2 bits (45), Expect = 0.97
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 40 KGAYYFEATVTDEGLCRVGWSTQA 111
K +F ATV +E CR QA
Sbjct: 453 KSTEFFLATVVEEAACRFSAVAQA 476
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.4 bits (43), Expect = 1.7
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +1
Query: 76 EGLCRVGWSTQAAK 117
EG CRV W A +
Sbjct: 367 EGYCRVAWPDDAGR 380
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.4 bits (43), Expect = 1.7
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +1
Query: 76 EGLCRVGWSTQAAK 117
EG CRV W A +
Sbjct: 367 EGYCRVAWPDDAGR 380
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 21.0 bits (42), Expect = 2.2
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 26 KVFIRKVHITLKP 64
K F+RKVH T P
Sbjct: 239 KSFVRKVHATKPP 251
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 20.6 bits (41), Expect = 3.0
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = +1
Query: 10 GCRATKGVHTKGAYY 54
GCR KG+ K Y
Sbjct: 608 GCRCVKGILLKSGLY 622
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 20.2 bits (40), Expect = 3.9
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = +3
Query: 87 PCRLVYTSGKAGSWN*QARLWIWW 158
P T+ KAG + L +WW
Sbjct: 50 PRESAQTTSKAGIHRKKVLLLVWW 73
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 20.2 bits (40), Expect = 3.9
Identities = 5/13 (38%), Positives = 10/13 (76%)
Frame = -2
Query: 55 SNMHLSYEHLWLP 17
+ +++ EH+WLP
Sbjct: 93 TELYVPSEHIWLP 105
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 19.8 bits (39), Expect = 5.2
Identities = 4/7 (57%), Positives = 7/7 (100%)
Frame = +3
Query: 147 WIWWYRQ 167
++WWY+Q
Sbjct: 81 FLWWYKQ 87
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 19.8 bits (39), Expect = 5.2
Identities = 4/7 (57%), Positives = 7/7 (100%)
Frame = +3
Query: 147 WIWWYRQ 167
++WWY+Q
Sbjct: 81 FLWWYKQ 87
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 19.8 bits (39), Expect = 5.2
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = -2
Query: 37 YEHLWLPY 14
Y+H W PY
Sbjct: 161 YDHTWWPY 168
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 19.4 bits (38), Expect = 6.9
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +3
Query: 105 TSGKAGSWN*QARLWIWW 158
T+ KAG + L +WW
Sbjct: 55 TTSKAGIHRKKVLLSVWW 72
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 19.4 bits (38), Expect = 6.9
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +3
Query: 105 TSGKAGSWN*QARLWIWW 158
T+ KAG + L +WW
Sbjct: 177 TTSKAGIHRKKVLLSVWW 194
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,760
Number of Sequences: 438
Number of extensions: 1222
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used: 4275738
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
- SilkBase 1999-2023 -