Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23i09
(606 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 40 3e-04
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po... 29 0.40
SPAC17A2.06c |vps8||WD repeat protein Vps8|Schizosaccharomyces p... 29 0.53
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 29 0.53
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.70
SPCC1682.03c |mug174||meiotically upregulated gene Mug174|Schizo... 29 0.70
SPBC19F5.05c |ppp1|SPBC25D12.01c|pescadillo-family BRCT domain p... 28 1.2
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 27 1.6
SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.1
SPAC1002.04c |taf11||transcription factor TFIID complex subunit ... 27 2.1
SPBC725.17c |rrn11||RNA polymerase I transcription factor subuni... 26 3.7
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|... 26 3.7
SPAC1805.14 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 3.7
SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3 |Schizos... 25 6.5
SPBC1734.10c |||mRNA processing protein |Schizosaccharomyces pom... 25 6.5
SPBC16H5.15 |||conserved fungal protein|Schizosaccharomyces pomb... 25 6.5
SPAC1B1.04c |||poly|Schizosaccharomyces pombe|chr 1|||Manual 25 8.6
SPAC30C2.04 |||cofactor for methionyl-and glutamyl-tRNA syntheta... 25 8.6
SPBC18E5.09c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 8.6
SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr ... 25 8.6
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 39.9 bits (89), Expect = 3e-04
Identities = 29/107 (27%), Positives = 56/107 (52%)
Frame = +3
Query: 78 KSHSKRSDKETQSSMLKIIQDLIRIEKCDPEKTNLLKQKADKKKRQHSQKSKTNHSSSCS 257
K +K+S K T S K ++ R +P K ++ KQK KKK + S +S++ SSS S
Sbjct: 38 KEIAKQSSK-TDVSPKKSKKEAKRASSPEPSKKSVKKQKKSKKKEESSSESESESSSSES 96
Query: 258 ETSKAMRDVDNVKGIRIENKNTLIDEEKGEWCFRTEKEDLDKDDTFS 398
E+S + + + + ++++ + E+ E +TE++ ++ S
Sbjct: 97 ESSSSESESSSSESESSSSESSSSESEE-EVIVKTEEKKESSSESSS 142
>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 284
Score = 29.5 bits (63), Expect = 0.40
Identities = 21/82 (25%), Positives = 41/82 (50%)
Frame = +3
Query: 72 SIKSHSKRSDKETQSSMLKIIQDLIRIEKCDPEKTNLLKQKADKKKRQHSQKSKTNHSSS 251
S +KR ++ SS K + DP+K L++ KKK++H +K K + SS
Sbjct: 158 SSSDEAKREKRKKHSSKKKSKKKTSTGSALDPKK---LEKITKKKKKEHKKKDKES-SSK 213
Query: 252 CSETSKAMRDVDNVKGIRIENK 317
++ + ++ K I++++K
Sbjct: 214 KRKSGSSDKEEKKKKKIKLKDK 235
>SPAC17A2.06c |vps8||WD repeat protein Vps8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1272
Score = 29.1 bits (62), Expect = 0.53
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 195 PSVSADSFSLDHIFLFVLNPGLFSTLMTVSLYHFS 91
P + S LD I F + GLF +L VS+Y F+
Sbjct: 618 PCIEYQSLDLDFITKFSRSKGLFDSLCYVSIYAFN 652
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 29.1 bits (62), Expect = 0.53
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +3
Query: 183 LKQKADKKKRQHSQKSKTNHSSSCSETSKAMRDVDNVKGIRIENKNTLIDEEKGEWCFRT 362
L++K D +KR +K + +S + R + N+K +E K + E G
Sbjct: 365 LRRKDDSRKRARDRKKERLEEASQKRLEEVNR-LKNLKRKELEEKLNQVIEIAGSKNIDV 423
Query: 363 EKEDLDKD 386
K DLD+D
Sbjct: 424 SKLDLDED 431
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.7 bits (61), Expect = 0.70
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +3
Query: 168 EKTNLLKQKADKKKRQHSQKSKTNHSSSCSETSKAMRDVDNVKGIRIE 311
E + K K DKK ++ K +HS S ++SK D ++E
Sbjct: 616 ESKSAEKDKKDKKDKKEDSKRSRSHSVSKPDSSKLRTWTDRTGAFKVE 663
>SPCC1682.03c |mug174||meiotically upregulated gene
Mug174|Schizosaccharomyces pombe|chr 3|||Manual
Length = 626
Score = 28.7 bits (61), Expect = 0.70
Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = +3
Query: 57 FRMGFSIKSHSKRSDKETQSSMLKIIQDLIRIEKCD-PEKTNLLKQKADKKKRQHSQKSK 233
F+ F + K+ +S L + Q+ + PE +LL ++ S S
Sbjct: 210 FKANFQQNKYESLHAKQISASDLSLHQEFVSASIVQQPELNSLLTSQSKNSTPSESDSSS 269
Query: 234 TNHSSSCSETSKAMRDVDNVKG 299
+ SSS S++S D+ G
Sbjct: 270 SESSSSVSDSSDLSSTSDSSSG 291
>SPBC19F5.05c |ppp1|SPBC25D12.01c|pescadillo-family BRCT domain
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 607
Score = 27.9 bits (59), Expect = 1.2
Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Frame = +3
Query: 66 GFSIKSHSKRSDKETQSSMLKIIQDLIRIEKCDPEKTNLLKQKADKKKRQHSQKSKTNHS 245
G + + K++ K + + + L EK + E L K K+R+ K K +S
Sbjct: 522 GVAYSEYVKQNSKSAKKTKKRQRDTLTAEEKEEKEAKELSKMMMSNKQRKLYSKLKNENS 581
Query: 246 SSCSETS---KAMRDVDNVKGIRIEN 314
+ + + RD++ K +++EN
Sbjct: 582 KNENYNNALRNRKRDIEKRKKLKVEN 607
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 27.5 bits (58), Expect = 1.6
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +3
Query: 57 FRMGFSIKSHSKRSDKETQSSMLKIIQDLIRIEKCDPE---KTNLLKQKADKKKRQHSQK 227
F++ I ++S+K ++S K+ + + + +PE +TNL K+K + K + S++
Sbjct: 120 FKLPKDILKVKEKSEKPLETSQ-KVEIETVETKPGEPEVKQETNLQKEKKESKVKLESKE 178
Query: 228 SKTNHSSSCSETS 266
K + + S S
Sbjct: 179 EKISRNLRSSSRS 191
>SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 27.1 bits (57), Expect = 2.1
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = -1
Query: 438 IGSRRSSLTHKTRTKTYRPYLDLLSQSESTIPLSPRR*EYFYFQSEYPSHYPRRALP 268
+G R+S+ RTK YL +S E+T ++ + ++ +F YP +P
Sbjct: 174 LGVRQSTQAKMLRTKRVYEYLIKVSYEENTFFIARKYSDFSHFHHLLLKSYPNAYVP 230
>SPAC1002.04c |taf11||transcription factor TFIID complex subunit
Taf11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 199
Score = 27.1 bits (57), Expect = 2.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 333 EEKGEWCFRTEKEDLDKDDTFSCVSCALKKIAG 431
+EK W R E+ DL++DD + A+ K+AG
Sbjct: 47 KEKENWN-RQEENDLEEDDRDDFGTAAISKVAG 78
>SPBC725.17c |rrn11||RNA polymerase I transcription factor subunit
Rrn11 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 200
Score = 26.2 bits (55), Expect = 3.7
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 258 ETSKAMRDVDNVKGIRIENKNTLIDEEKGEWCFRTEKEDLDKDD 389
E +KAM+ +D + N+N + E G CF KE+ + +
Sbjct: 136 EYNKAMKLLDEYLLLPPYNQNPALHEYSGMLCFELAKEEASESE 179
>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 26.2 bits (55), Expect = 3.7
Identities = 15/69 (21%), Positives = 31/69 (44%)
Frame = +3
Query: 201 KKKRQHSQKSKTNHSSSCSETSKAMRDVDNVKGIRIENKNTLIDEEKGEWCFRTEKEDLD 380
KK+ + ++ +K+ + A D KG++ K ++ K + E+E L+
Sbjct: 5 KKRAEKAEAAKSRKQDEEKKKKDAEEDEKWSKGVKTNKKEQEAEKRKAALERKAERERLE 64
Query: 381 KDDTFSCVS 407
K++ S S
Sbjct: 65 KEEMESLPS 73
>SPAC1805.14 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 452
Score = 26.2 bits (55), Expect = 3.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 159 CDPEKTNLLKQKADKKKRQHSQKSKTN 239
C P +K +D+K+R+HS+ S N
Sbjct: 40 CSPFTLKPIKSTSDRKRRRHSRMSIVN 66
>SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 601
Score = 25.4 bits (53), Expect = 6.5
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +3
Query: 63 MGFSIKSHSKRSDKETQSSMLKIIQDLIRIEKCDPEKTNLLKQKADKKKRQHSQKSKTNH 242
MGFS S + + +ET + + I+ +++ P+K + L K ++ K N
Sbjct: 168 MGFSDDSVNTHALEETNGDVTRAIEKIVQHGSSKPQKPSTLTSTKSTIKLVSARLKKRNK 227
Query: 243 SSS 251
+ S
Sbjct: 228 NLS 230
>SPBC1734.10c |||mRNA processing protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 332
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +3
Query: 240 HSSSCSETSKAMRDVDNVKGIRIENKNTLIDEEKGEWCFRTEKEDLDKDDTFS 398
H S C+ + D+ G+R++ + ID++K F E L D ++
Sbjct: 170 HCSFCNAELGLPNNKDSSNGVRLDKSSICIDDQKIHPSFIVASEILTLRDMYA 222
>SPBC16H5.15 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 166
Score = 25.4 bits (53), Expect = 6.5
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +3
Query: 171 KTNLLKQKADKKKRQHSQKSKTNHSSSCSETSKAMRDVDNVKGIRIENKNTLIDEEK 341
K L+QKA K+R S K +TN + S K ++D++ + + +++EEK
Sbjct: 88 KEKELRQKALDKERMVSSKPETNPKTPIS--LKELKDIEIYQNQFHYSAYEILEEEK 142
>SPAC1B1.04c |||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 604
Score = 25.0 bits (52), Expect = 8.6
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 501 LFKSTPVFNSQPSRFYDSERLK 566
LF ++PVF + S FY S+ LK
Sbjct: 311 LFFASPVFRKRTSSFYFSQPLK 332
>SPAC30C2.04 |||cofactor for methionyl-and glutamyl-tRNA synthetases
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 450
Score = 25.0 bits (52), Expect = 8.6
Identities = 18/79 (22%), Positives = 33/79 (41%)
Frame = +3
Query: 72 SIKSHSKRSDKETQSSMLKIIQDLIRIEKCDPEKTNLLKQKADKKKRQHSQKSKTNHSSS 251
S+ K+ KE + S ++ +EK K+K +KK+++ + K +
Sbjct: 211 SVIKKDKKEKKEGKPSQEASVKS---VEKAPKGLEGAKKEKQNKKEKKDKKDKKDKKEKA 267
Query: 252 CSETSKAMRDVDNVKGIRI 308
E KA V ++ RI
Sbjct: 268 PKEPPKAATPVPSMIDFRI 286
>SPBC18E5.09c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 128
Score = 25.0 bits (52), Expect = 8.6
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 355 KHHSPFSSSMRVFLFSIRIPFTLSTSRI-AFDVSEQLEL 242
++HSP ++R+ LFS ++L++ F V E L L
Sbjct: 77 RYHSPLLFTVRLLLFSTYWSYSLASQHFKVFTVKESLLL 115
>SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1337
Score = 25.0 bits (52), Expect = 8.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 531 QPSRFYDSERLKRKIDYLKDKKGW 602
+PS F+ LKRK YLK+ W
Sbjct: 170 KPS-FFSKSNLKRKYRYLKNPDAW 192
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,235,676
Number of Sequences: 5004
Number of extensions: 41339
Number of successful extensions: 170
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 266270664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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