Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23i06
         (624 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40028-10|AAA81121.3|  363|Caenorhabditis elegans Serpentine rec...    33   0.22 
U40030-4|AAS80338.1|  909|Caenorhabditis elegans Hypothetical pr...    29   3.6  
U40030-3|AAS80339.1|  911|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z81104-1|CAB70255.1|  329|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U41996-7|AAA83476.1|  298|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z49125-4|CAA88936.1|  644|Caenorhabditis elegans Hypothetical pr...    28   6.2  

>U40028-10|AAA81121.3|  363|Caenorhabditis elegans Serpentine
           receptor, class e (epsilon)protein 40 protein.
          Length = 363

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 11/48 (22%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +1

Query: 133 YLFQTFYLEMLLSILGYD-WEYLYNIYLQILSEVLVYVKNFALYICAW 273
           Y+F   +++   +++ Y  W    ++Y+ +L+ +L+ + NF L+   W
Sbjct: 172 YIFAIVFIQTFTALVAYSAWNLWLSVYIWLLTGILLLIVNFGLFGYIW 219


>U40030-4|AAS80338.1|  909|Caenorhabditis elegans Hypothetical
           protein T13C2.6a protein.
          Length = 909

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +2

Query: 347 EHSERRECS*LSHTQMMNACFSDQRSLDCVNRVPTC 454
           +HS+ + C+ + HT  +   F+ + S +C+N+   C
Sbjct: 240 DHSDEKNCTAIQHTCKLAEEFACKASHNCINKAFVC 275


>U40030-3|AAS80339.1|  911|Caenorhabditis elegans Hypothetical
           protein T13C2.6b protein.
          Length = 911

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +2

Query: 347 EHSERRECS*LSHTQMMNACFSDQRSLDCVNRVPTC 454
           +HS+ + C+ + HT  +   F+ + S +C+N+   C
Sbjct: 242 DHSDEKNCTAIQHTCKLAEEFACKASHNCINKAFVC 277


>Z81104-1|CAB70255.1|  329|Caenorhabditis elegans Hypothetical
           protein M199.1 protein.
          Length = 329

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +3

Query: 249 FCIVHLCMGVKLFTSMWCCISTVRSKASDKNSRSTRSEESAHSYR 383
           FC++++   +  FT+  C  S + +  SD  S    SEE+ + YR
Sbjct: 156 FCVIYMFY-ISFFTTPACFNSLIMAWPSDPLSEKEPSEEATNYYR 199


>U41996-7|AAA83476.1|  298|Caenorhabditis elegans Hypothetical
           protein F38E1.10 protein.
          Length = 298

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -3

Query: 265 KCTMQNFSHKLKLLTKFASKYYTNIPNRIPILTITFLSRKFEIDITLI 122
           +C   +   K      F  KY   IPNRIP +     +R F+++  ++
Sbjct: 77  QCAPASGDSKSSAFAVFDMKYIVEIPNRIPSVKCFTRNRLFDMESAIV 124


>Z49125-4|CAA88936.1|  644|Caenorhabditis elegans Hypothetical
           protein C47G2.4 protein.
          Length = 644

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -3

Query: 229 LLTKFASKYYTNIPNRIPILTI-TFLSRKFEIDITLICPL 113
           LLT +    Y+ I  + PI+TI TF+   F + I  + PL
Sbjct: 15  LLTSYLLNKYSTIRKQNPIVTISTFIGWYFSLIIVFVLPL 54


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,355,402
Number of Sequences: 27780
Number of extensions: 271080
Number of successful extensions: 853
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)