BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23h22
(561 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC065241-1|AAH65241.1| 247|Homo sapiens ZNF323 protein protein. 31 3.7
BC008490-1|AAH08490.1| 209|Homo sapiens zinc finger protein 323... 31 3.7
AL833416-1|CAD38641.1| 247|Homo sapiens hypothetical protein pr... 31 3.7
AL021997-2|CAA17574.2| 406|Homo sapiens zinc finger protein 323... 31 3.7
AK057702-1|BAB71548.1| 406|Homo sapiens protein ( Homo sapiens ... 31 3.7
AK027060-1|BAB15643.1| 209|Homo sapiens protein ( Homo sapiens ... 31 3.7
AF513019-1|AAM47006.1| 406|Homo sapiens zinc finger protein 323... 31 3.7
BC013762-1|AAH13762.2| 271|Homo sapiens zinc finger protein 501... 30 6.4
>BC065241-1|AAH65241.1| 247|Homo sapiens ZNF323 protein protein.
Length = 247
Score = 30.7 bits (66), Expect = 3.7
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +3
Query: 147 VCGSCYLKSCCATRHHRPRS--KQYTLKDLGFPFQMRASRYSRFTVNSTRK 293
VCG +L S C +H R + K+Y ++ G F A + V++ K
Sbjct: 168 VCGKAFLLSSCLVQHQRIHTGEKRYQCRECGKAFIQNAGLFQHLRVHTGEK 218
>BC008490-1|AAH08490.1| 209|Homo sapiens zinc finger protein 323
protein.
Length = 209
Score = 30.7 bits (66), Expect = 3.7
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +3
Query: 147 VCGSCYLKSCCATRHHRPRS--KQYTLKDLGFPFQMRASRYSRFTVNSTRK 293
VCG +L S C +H R + K+Y ++ G F A + V++ K
Sbjct: 130 VCGKAFLLSSCLVQHQRIHTGEKRYQCRECGKAFIQNAGLFQHLRVHTGEK 180
>AL833416-1|CAD38641.1| 247|Homo sapiens hypothetical protein
protein.
Length = 247
Score = 30.7 bits (66), Expect = 3.7
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +3
Query: 147 VCGSCYLKSCCATRHHRPRS--KQYTLKDLGFPFQMRASRYSRFTVNSTRK 293
VCG +L S C +H R + K+Y ++ G F A + V++ K
Sbjct: 168 VCGKAFLLSSCLVQHQRIHTGEKRYQCRECGKAFIQNAGLFQHLRVHTGEK 218
>AL021997-2|CAA17574.2| 406|Homo sapiens zinc finger protein 323
protein.
Length = 406
Score = 30.7 bits (66), Expect = 3.7
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +3
Query: 147 VCGSCYLKSCCATRHHRPRS--KQYTLKDLGFPFQMRASRYSRFTVNSTRK 293
VCG +L S C +H R + K+Y ++ G F A + V++ K
Sbjct: 327 VCGKAFLLSSCLVQHQRIHTGEKRYQCRECGKAFIQNAGLFQHLRVHTGEK 377
>AK057702-1|BAB71548.1| 406|Homo sapiens protein ( Homo sapiens
cDNA FLJ33140 fis, clone UTERU1000160, moderately
similar to ZINC FINGER PROTEIN 191. ).
Length = 406
Score = 30.7 bits (66), Expect = 3.7
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +3
Query: 147 VCGSCYLKSCCATRHHRPRS--KQYTLKDLGFPFQMRASRYSRFTVNSTRK 293
VCG +L S C +H R + K+Y ++ G F A + V++ K
Sbjct: 327 VCGKAFLLSSCLVQHQRIHTGEKRYQCRECGKAFIQNAGLFQHLRVHTGEK 377
>AK027060-1|BAB15643.1| 209|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23407 fis, clone HEP19601. ).
Length = 209
Score = 30.7 bits (66), Expect = 3.7
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +3
Query: 147 VCGSCYLKSCCATRHHRPRS--KQYTLKDLGFPFQMRASRYSRFTVNSTRK 293
VCG +L S C +H R + K+Y ++ G F A + V++ K
Sbjct: 130 VCGKAFLLSSCLVQHQRIHTGEKRYQCRECGKAFIQNAGLFQHLRVHTGEK 180
>AF513019-1|AAM47006.1| 406|Homo sapiens zinc finger protein 323
protein.
Length = 406
Score = 30.7 bits (66), Expect = 3.7
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +3
Query: 147 VCGSCYLKSCCATRHHRPRS--KQYTLKDLGFPFQMRASRYSRFTVNSTRK 293
VCG +L S C +H R + K+Y ++ G F A + V++ K
Sbjct: 327 VCGKAFLLSSCLVQHQRIHTGEKRYQCRECGKAFIQNAGLFQHLRVHTGEK 377
>BC013762-1|AAH13762.2| 271|Homo sapiens zinc finger protein 501
protein.
Length = 271
Score = 29.9 bits (64), Expect = 6.4
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +3
Query: 132 ECTKHVCGSCYLKSCCATRHHRPRS--KQYTLKDLGFPFQMRASRYSRFTVNSTRK 293
+CT+ CG + +S C TRH R S K + + G F A ++S K
Sbjct: 135 KCTE--CGKAFSQSICLTRHQRSHSGDKPFKCNECGKAFNQSACLMQHQRIHSGEK 188
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,303,565
Number of Sequences: 237096
Number of extensions: 2128430
Number of successful extensions: 8807
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8806
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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