Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23h17
         (644 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030239-1|ABN49378.1|  126|Drosophila melanogaster IP18262p pro...    36   0.062
BT023002-1|AAY55418.1|  145|Drosophila melanogaster IP08468p pro...    30   3.1  
AE014297-2551|AAF55572.1|  145|Drosophila melanogaster CG7695-PA...    30   3.1  
AE014134-2647|AAN10917.1|  362|Drosophila melanogaster CG31824-P...    29   5.4  

>BT030239-1|ABN49378.1|  126|Drosophila melanogaster IP18262p
           protein.
          Length = 126

 Score = 35.5 bits (78), Expect = 0.062
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +2

Query: 167 KIADQCQHDFVPVCGQDSL-GISRMFNDNCDLYEYNCDEKKQYRHVKMDVCKY 322
           K  D C   +  VC  D L G  R F  +C +  YNC  +K YR +    C++
Sbjct: 63  KCHDVCPMGYRVVCALDVLDGCLRSFASSCVMRMYNCKYQKDYRIIAERACEF 115


>BT023002-1|AAY55418.1|  145|Drosophila melanogaster IP08468p
           protein.
          Length = 145

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
 Frame = +2

Query: 143 LEPVINFCK--IADQCQHDFVPVCGQDSLGISRMFNDNCDLYEYNCDEKKQYRHVKMDVC 316
           +E     CK     +C   + PVC Q        F++ C++  Y C  ++ Y  + +  C
Sbjct: 80  IETTREICKPSCTKECPDIYDPVCAQIFQEEYLTFSNECEMRNYICTNERPYSFISVGEC 139


>AE014297-2551|AAF55572.1|  145|Drosophila melanogaster CG7695-PA
           protein.
          Length = 145

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
 Frame = +2

Query: 143 LEPVINFCK--IADQCQHDFVPVCGQDSLGISRMFNDNCDLYEYNCDEKKQYRHVKMDVC 316
           +E     CK     +C   + PVC Q        F++ C++  Y C  ++ Y  + +  C
Sbjct: 80  IETTREICKPSCTKECPDIYDPVCAQIFQEEYLTFSNECEMRNYICTNERPYSFISVGEC 139


>AE014134-2647|AAN10917.1|  362|Drosophila melanogaster CG31824-PA
           protein.
          Length = 362

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 524 KGAPRSNPSDSSKFVSVICWKTKIS 450
           KGAP   P++SSK+  V+ W T ++
Sbjct: 312 KGAPLVCPTESSKYYVVMAWSTSLN 336


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,700,277
Number of Sequences: 53049
Number of extensions: 448779
Number of successful extensions: 965
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)