Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23h16
(610 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1104 - 30928475-30928501,30929008-30929110,30929287-309293... 31 0.54
01_06_0335 - 28532241-28532579 31 0.94
04_03_0205 + 12649724-12650191,12651493-12652025,12652114-126522... 30 1.6
08_01_0768 + 7408004-7408159,7409101-7409297,7427823-7428206,742... 29 2.2
03_05_0821 - 27960414-27961253 29 2.2
02_05_0752 + 31491462-31491921,31492177-31492271,31492346-314925... 29 2.2
12_01_0599 - 4892146-4893552 29 2.9
08_01_0704 + 6219530-6219609,6221595-6222243,6222339-6222437,622... 29 2.9
03_01_0259 - 1996427-1998772 29 2.9
11_06_0726 - 26707605-26708036 29 3.8
11_05_0059 - 18724619-18725053 29 3.8
04_04_0599 - 26516854-26517452,26517547-26517963,26518044-265183... 29 3.8
03_01_0356 + 2793565-2793811,2793879-2793980,2794387-2794529,279... 29 3.8
07_03_1559 + 27727492-27728193 28 5.0
04_04_0465 + 25427065-25427113,25428099-25428227,25428387-254284... 28 5.0
04_04_1098 + 30876785-30876835,30876846-30877171,30877396-308774... 28 6.7
02_03_0005 + 13865016-13865025,13865247-13865374,13865467-138659... 28 6.7
12_02_0306 + 17307166-17309091 27 8.8
10_08_0949 - 21759821-21759833,21759985-21760301,21760650-217607... 27 8.8
05_03_0645 + 16529635-16529794,16530188-16530312,16531100-165311... 27 8.8
04_03_0935 + 20918617-20919299,20919328-20919627,20919680-209198... 27 8.8
>04_04_1104 -
30928475-30928501,30929008-30929110,30929287-30929340,
30929803-30929895,30930063-30930140,30930416-30930527,
30930618-30930756,30930823-30930910,30930984-30931079,
30931675-30931781,30931874-30932009,30932089-30932186,
30932954-30933047,30933132-30933301,30933749-30933819,
30936066-30936194,30936552-30936654,30936764-30936907,
30937123-30937245,30937482-30937563,30939044-30939120,
30939261-30939315,30939365-30939443,30939544-30939620,
30939739-30939869,30939947-30940120,30940245-30940310,
30940937-30941572
Length = 1113
Score = 31.5 bits (68), Expect = 0.54
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = -1
Query: 241 PE*SLNLAADTTALH---ASTNTSANAIRPPPNVPPARRQSS 125
P+ + LA D LH AS+N +A A PP NVPPA +S
Sbjct: 124 PQCGVELAVDLAKLHNFLASSNNNA-AAAPPDNVPPASGPAS 164
>01_06_0335 - 28532241-28532579
Length = 112
Score = 30.7 bits (66), Expect = 0.94
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +1
Query: 229 ATTLGLKCHSTKQATKDLMTQSPCLKTTTDTHQTPPHLSIISMKKILNMVKQKVWKEKPK 408
AT ++K+A+ DLM SPC+ + Q P + S K ++K+ PK
Sbjct: 29 ATPAAASARASKKASCDLMQLSPCVSAFSGVGQGSPSSACCSKLKAQGSSCLCLYKDDPK 88
Query: 409 SK 414
K
Sbjct: 89 VK 90
>04_03_0205 +
12649724-12650191,12651493-12652025,12652114-12652239,
12652625-12652724,12652880-12652899,12653035-12653137,
12653213-12653351,12653448-12653662,12653772-12654320
Length = 750
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 384 ESLEREAEVETWKK--SKGRRRVVIDSQDTHDTEFDNE 491
ESL++EAE E + +G ++DS D +DT ++N+
Sbjct: 578 ESLQKEAEKEDHARVSGEGSSAALVDSDDENDTAWENQ 615
>08_01_0768 +
7408004-7408159,7409101-7409297,7427823-7428206,
7428456-7428837
Length = 372
Score = 29.5 bits (63), Expect = 2.2
Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 6/109 (5%)
Frame = +3
Query: 231 DYSGAKMPQYETGDEGSDDAESLLEDYHGHSPDASSPLDYKYEEDIKYGKTESLEREAEV 410
DY G ++P+ E D A + SP+ S D K ++S +++
Sbjct: 85 DYQGKQLPEQEGDDAEPHAAREVTAVILTGSPERSPEKDEKQCPGSNQAPSQSTDKKD-- 142
Query: 411 ETWKKSKGRRRVVIDSQDTHDT------EFDNELEADFGRRRPNQNYFQ 539
T +++ G R VI D T EF E A +RR +N F+
Sbjct: 143 GTLQRNSGANRTVIWKMDNGRTMIITGSEFTPEDAARIPKRRRGRNTFR 191
>03_05_0821 - 27960414-27961253
Length = 279
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 210 LLHSTPVPIPAPTPSALPQMCPLHVARALS 121
LLH VP+P+P P AL + LH A L+
Sbjct: 51 LLHRRVVPLPSPHPRALRAVSALHSAVLLA 80
>02_05_0752 +
31491462-31491921,31492177-31492271,31492346-31492573,
31493070-31493157,31493275-31493326,31493985-31494050,
31494382-31494536,31494633-31494703,31494820-31495017,
31495103-31495144,31496223-31496324,31496514-31496603,
31496708-31496783,31497299-31497395,31497488-31497557,
31497676-31497852,31498156-31498239,31498971-31499093,
31500143-31500226,31500318-31500502,31500592-31500730,
31500841-31500900,31500969-31501040,31501136-31501197,
31501839-31501945,31501984-31502058,31502800-31503248
Length = 1168
Score = 29.5 bits (63), Expect = 2.2
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Frame = +3
Query: 270 DEGSDDAESLLEDYHGHSPDASSPLDYKYEED-IKYGKTESLEREAE-----VETWKKSK 431
D G D +ES ED H S D S ++ + +ED G+ ++ E + E VE KKS
Sbjct: 186 DYGDDYSESDEEDEHDESEDEESDIEDEGDEDWTSNGEAKTDESDDEDALKSVEELKKSV 245
Query: 432 GRRRVVI 452
R R ++
Sbjct: 246 DRLRKLV 252
>12_01_0599 - 4892146-4893552
Length = 468
Score = 29.1 bits (62), Expect = 2.9
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Frame = -1
Query: 163 PPPNVPPARRQSSLLASMVATIVFYS----VKIVAYSTTGTTNLT--FGEFE 26
PPP+ +Q+SLL S+VAT VFY+ + A+ NL FG FE
Sbjct: 263 PPPSEAKVMKQASLL-SIVATSVFYALCGWMGYAAFGNAAPDNLLTGFGFFE 313
>08_01_0704 +
6219530-6219609,6221595-6222243,6222339-6222437,
6222521-6222616,6222750-6222848,6222929-6223027,
6223811-6223882,6224508-6224597,6225173-6227329
Length = 1146
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 391 WKEKPKSKHGKNLREEGE**SIPKILTTQNLI 486
WKE K+G NL+ + + +P I+ T N++
Sbjct: 358 WKEDRPRKNGSNLKTDPQQYPMPNIIATSNIV 389
>03_01_0259 - 1996427-1998772
Length = 781
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -1
Query: 220 AADTTALHASTNTSANAIRPPPNVPPARRQS-SLLASMVA 104
A TTA + A + PPP +PP R S SL+ S+ A
Sbjct: 14 ATTTTACASQNLIPATSKEPPPRLPPKRGSSKSLVVSLAA 53
>11_06_0726 - 26707605-26708036
Length = 143
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = -1
Query: 229 LNLAADTTALHASTNTSANAIRPPPNVPPARRQSSLLASMVATIVFYSVKIVAYSTTGTT 50
L A +A + SA + PPP+ L+AS+ ATI+ A++TTG
Sbjct: 19 LGSRAAASAFATTGEASATGVPPPPH---------LIASVTATILGSCAAASAFATTGEA 69
Query: 49 NLT 41
N T
Sbjct: 70 NAT 72
>11_05_0059 - 18724619-18725053
Length = 144
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = -3
Query: 533 IILVRSPASEVSFQFVIKFCVVSILGIDYYSPSSLRFFPCFDFGFSFQ 390
++ +R+P S +S + +C+V +Y + + FDFGF Q
Sbjct: 83 VVWIRTPRSRISTS-KLPYCLVLCFDFRFYLQAPVLSCSAFDFGFYLQ 129
>04_04_0599 -
26516854-26517452,26517547-26517963,26518044-26518394,
26518651-26518748,26518875-26518945,26519638-26520318
Length = 738
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +3
Query: 6 DNLQVVVSNSPNVKFVVPVVEYATIFTE*NTIVATILARRELWRRA 143
++L V N P V F V ATIF + I++ R LWR A
Sbjct: 87 ESLHGVCDNGPGVNFSSGPVRSATIFPQ--VILSAAAFNRSLWRAA 130
>03_01_0356 +
2793565-2793811,2793879-2793980,2794387-2794529,
2795210-2795297,2795444-2795787
Length = 307
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +3
Query: 276 GSDDAESLLEDYHGHSPDA--SSPLDYKYEEDIK-YGKTESLEREAEVE 413
G DD ++D + D S+PLD E+ ++ YGKT S E E ++
Sbjct: 38 GDDDHHQYMDDDDDYGDDEPPSNPLDSYREDWVEIYGKTGSFEDETHLD 86
>07_03_1559 + 27727492-27728193
Length = 233
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +3
Query: 303 EDYHGHSPDASSPLDYKYEEDIKYGKTESLEREAEVETWKKSKGRRRVV 449
ED HG + S+P K+ E + G +ET K+ GRRRVV
Sbjct: 163 EDAHGAAALCSTPELRKHYEQL-VGAARGRPWSPRLETIKERNGRRRVV 210
>04_04_0465 +
25427065-25427113,25428099-25428227,25428387-25428479,
25428681-25428953,25429037-25429288,25429735-25430118,
25430243-25430483,25431986-25432736
Length = 723
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -2
Query: 222 WPLTLLHSTPVPIPAPTPSALPQ 154
W HS P P PAP P+ P+
Sbjct: 35 WSRAHRHSLPAPAPAPAPAPAPE 57
>04_04_1098 +
30876785-30876835,30876846-30877171,30877396-30877418,
30877687-30879392
Length = 701
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/86 (22%), Positives = 39/86 (45%)
Frame = +3
Query: 231 DYSGAKMPQYETGDEGSDDAESLLEDYHGHSPDASSPLDYKYEEDIKYGKTESLEREAEV 410
D AK + + G + +S + GH D+ + K +++ +YG + + EA+
Sbjct: 219 DRRHAKKGKKDKGSDAKSHGKSSRKIKLGHDSDSDHDDNKKKKKNSRYGSED--DSEAKY 276
Query: 411 ETWKKSKGRRRVVIDSQDTHDTEFDN 488
+ K SK + D+ D +++ N
Sbjct: 277 DEKKHSKHLKNSRHDTDDDSESDHKN 302
>02_03_0005 +
13865016-13865025,13865247-13865374,13865467-13865994,
13866111-13866287
Length = 280
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 219 PLTLLHSTPVPIPAPTPSALPQMCP 145
PL S PVP+P P PS M P
Sbjct: 94 PLPYPFSVPVPVPVPIPSGAVPMHP 118
>12_02_0306 + 17307166-17309091
Length = 641
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +2
Query: 128 ALATCRGHIWGRADGVGAGIGTGVECSSVSG 220
A R + R GVGAG G GV CS G
Sbjct: 48 ACGGARDGVGVRLIGVGAGAGAGVGCSLTGG 78
>10_08_0949 -
21759821-21759833,21759985-21760301,21760650-21760728,
21760816-21760912,21761305-21761410
Length = 203
Score = 27.5 bits (58), Expect = 8.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 198 TPVPIPAPTPSALPQMCPL 142
TP P PAP P+ +P P+
Sbjct: 125 TPAPAPAPAPATVPPAAPV 143
>05_03_0645 +
16529635-16529794,16530188-16530312,16531100-16531173,
16531961-16532006,16532638-16532730,16534429-16535886
Length = 651
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -1
Query: 211 TTALHASTNTSANAIRPPPNVP 146
T L AS+ TSA A+ PPP+ P
Sbjct: 327 TAGLMASSATSAAAMAPPPSAP 348
>04_03_0935 +
20918617-20919299,20919328-20919627,20919680-20919836,
20921338-20921397,20921554-20921670
Length = 438
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 258 YETGDEGSDDAESLLEDYHGHSPD-ASSPLDYKYEEDIKYGK-TESLEREAEV 410
Y++GD+G D+ E+ E G D + D E + Y TE+ ER V
Sbjct: 334 YDSGDDGDDEVETAYESGGGDDDDEVETEYDSDDEVEAWYDSGTETSERHRRV 386
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,841,113
Number of Sequences: 37544
Number of extensions: 350440
Number of successful extensions: 2387
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2336
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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