Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23h16
         (610 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    25   0.77 
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   4.1  
X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.       22   5.4  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    22   5.4  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    22   5.4  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    22   5.4  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    22   5.4  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   5.4  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    21   7.1  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   9.4  

>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -1

Query: 250 ILAPE*SLNLAADTTALH-ASTNTSANAIRPPPNVP 146
           ++A   SL L    T  H A T+T+A A   PP+VP
Sbjct: 23  VVAGAASLTLVKAETPEHLAGTSTTAAATPTPPSVP 58


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 201 STPVPIPAPTPSALPQMCPLHVAR 130
           ST  P P PTP+   +M  L++ R
Sbjct: 380 STTGPPPGPTPAQKARMRALNIDR 403


>X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.
          Length = 70

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 216 LTLLHSTPVPIPAPTPSA 163
           ++ +++ P P PAP P A
Sbjct: 16  ISYIYAAPEPEPAPEPEA 33


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -2

Query: 216 LTLLHSTPVPIPAPTP 169
           +  +   PVP+P P P
Sbjct: 105 INYIEQIPVPVPVPVP 120


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -2

Query: 216 LTLLHSTPVPIPAPTP 169
           +  +   PVP+P P P
Sbjct: 105 INYIEQIPVPVPVPVP 120


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -2

Query: 216 LTLLHSTPVPIPAPTP 169
           +  +   PVP+P P P
Sbjct: 105 INYIEQIPVPVPVPVP 120


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -2

Query: 216 LTLLHSTPVPIPAPTP 169
           +  +   PVP+P P P
Sbjct: 338 INYIEQIPVPVPVPVP 353


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = +3

Query: 237 SGAKMPQYETGDEGSDDAESLLEDYHGH-SPDASSPLDYK 353
           SG   P        S  ++S ++      SPD +SP++Y+
Sbjct: 388 SGGSFPSLYPMATTSPQSQSTIQTLRPQVSPDRTSPMEYR 427


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -2

Query: 216 LTLLHSTPVPIPAPTP 169
           +  +   PVP+P P P
Sbjct: 105 INYIEQIPVPVPIPVP 120


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
 Frame = +3

Query: 279 SDDAESLLEDYHGH--SPDASSPLDYKYEEDIKYGKTESLEREAEVETWKKSKGRRRV 446
           S D+++    Y+    S  ASS   Y   +D   G  +  +R   V   KKS G R++
Sbjct: 80  SMDSQNSASTYNSFLSSDSASSGNVYCKCDDCLLGIVDDYQRNPSVVGRKKSSGWRKL 137


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,455
Number of Sequences: 438
Number of extensions: 3634
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)