Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23h11
(633 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13A2.01c |||nuclear cap-binding complex small subunit|Schizo... 52 7e-08
SPAC19A8.13 |usp101|snp1|U1 snRNP-associated protein Usp101 |Sch... 46 5e-06
SPBC18H10.03 |tif35||translation initiation factor eIF3g|Schizos... 43 4e-05
SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyc... 41 1e-04
SPBC3B9.11c |ctf1||mRNA cleavage and polyadenylation specificity... 40 2e-04
SPBC660.15 |||mRNA cleavage factor complex subunit |Schizosaccha... 39 7e-04
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 38 0.001
SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyce... 38 0.001
SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 38 0.001
SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 38 0.001
SPAC23A1.09 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 38 0.001
SPAC3G6.04 |rnp24||RNA-binding protein Rnp24|Schizosaccharomyces... 37 0.002
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 37 0.002
SPBC887.05c |cwf29||RNA-binding protein Cwf29|Schizosaccharomyce... 37 0.002
SPCC1827.05c |||nucleolar RNA-binding protein NIFK |Schizosaccha... 36 0.004
SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces po... 36 0.006
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 35 0.008
SPAC328.05 |||RNA-binding protein involved in export of mRNAs|Sc... 32 0.060
SPBC18H10.04c |sce3|tif48|translation initiation factor eIF4B|Sc... 32 0.079
SPAC22E12.02 |||RNA-binding protein|Schizosaccharomyces pombe|ch... 31 0.10
SPBC29A10.02 |spo5|mrb1, mug12, SPBC365.18|meiotic RNA-binding p... 31 0.10
SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces p... 30 0.24
SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr 1|||... 28 0.97
SPAC31G5.04 |||homoisocitrate dehydrogenase|Schizosaccharomyces ... 27 1.7
SPBC106.12c |||THO complex subunit |Schizosaccharomyces pombe|ch... 27 1.7
SPBC23E6.01c ||SPBPJ758.01|RNA-binding protein, rrm type|Schizos... 27 1.7
SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces... 27 2.3
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 27 2.3
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 26 5.2
>SPBC13A2.01c |||nuclear cap-binding complex small
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 182
Score = 52.0 bits (119), Expect = 7e-08
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +1
Query: 445 VRLLENPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFV-YF 621
+R L+ S C+ V LS YTTE+QI +FSK G + ++ + +D T GFCFV YF
Sbjct: 22 LRALDAVKQSNCVYVGNLSFYTTEEQIYALFSKCGEIRRIIMGVDRFTKTPCGFCFVEYF 81
Query: 622 EDME 633
E+ +
Sbjct: 82 ENQD 85
>SPAC19A8.13 |usp101|snp1|U1 snRNP-associated protein Usp101
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 261
Score = 46.0 bits (104), Expect = 5e-06
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = +1
Query: 469 PSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFE 624
P + + + LS T E I F++YGP+++++VV + TG+S G+ FV FE
Sbjct: 98 PYKTMFLSRLSYDTKESDIEREFTRYGPIERIRVVRNKVTGKSMGYAFVVFE 149
>SPBC18H10.03 |tif35||translation initiation factor
eIF3g|Schizosaccharomyces pombe|chr 2|||Manual
Length = 282
Score = 42.7 bits (96), Expect = 4e-05
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = +1
Query: 472 SRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDME 633
S L V LS T E+++ +F ++G + +V + D +TGR++GF FV + D +
Sbjct: 201 SATLRVTNLSDDTREEELRDLFRRFGGIQRVYLAKDKETGRAKGFAFVSYYDRD 254
>SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 438
Score = 41.1 bits (92), Expect = 1e-04
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +1
Query: 442 RVRLLENPTPS---RCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCF 612
RV + +P P RC+ V L+ E+ + F G +D V++V D KT +GF +
Sbjct: 256 RVDSVSHPMPQDTKRCVFVGNLAFEAEEEPLWRYFGDCGSIDYVRIVRDPKTNLGKGFAY 315
Query: 613 VYFED 627
+ F+D
Sbjct: 316 IQFKD 320
>SPBC3B9.11c |ctf1||mRNA cleavage and polyadenylation specificity
factor complex subunit Ctf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 363
Score = 40.3 bits (90), Expect = 2e-04
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +1
Query: 511 TEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDME 633
+EQQ+ IF++ GPV ++V+D +TG +G+ F F D E
Sbjct: 19 SEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCEFFDSE 59
>SPBC660.15 |||mRNA cleavage factor complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 38.7 bits (86), Expect = 7e-04
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +1
Query: 493 GLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFED 627
GL+ TT+ + F ++G V V+ D+ TGRSRGF F+ F++
Sbjct: 169 GLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKN 213
Score = 36.7 bits (81), Expect = 0.003
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +1
Query: 511 TEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFED 627
TE++ + F+++G V +++D TGR RGF FV +E+
Sbjct: 259 TEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYEN 297
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 38.3 bits (85), Expect = 0.001
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +1
Query: 469 PSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDME 633
P L V L+ T ++ + IFS++G + QV+ D +TG S + F+ F++ E
Sbjct: 242 PENVLFVCKLNPVTQDEDLELIFSRFGKIISCQVIRDKETGDSLQYAFIEFDNKE 296
>SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 297
Score = 38.3 bits (85), Expect = 0.001
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +1
Query: 481 LGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDME 633
L V G++ E ++ IFSK+G V V+++ + T SRGF F+ F +E
Sbjct: 103 LFVSGIASRMQEDELQQIFSKFGTVTHVRIMREPVTKASRGFGFLSFSTVE 153
>SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 422
Score = 38.3 bits (85), Expect = 0.001
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +1
Query: 469 PSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFED 627
PS + V + E+Q+ IF + GPV Q+VID ++G+ +G+ F + D
Sbjct: 3 PSCVVYVGNIPYEMAEEQVIDIFKQSGPVKSFQLVIDPESGQPKGYGFCEYHD 55
>SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 674
Score = 37.9 bits (84), Expect = 0.001
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 481 LGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDME 633
L V L+ T + + + FS GP+ VV + +TG +RG+ FV F +E
Sbjct: 7 LFVRNLAFQTKQDDLTNFFSDVGPIKHAVVVTNPETGENRGYGFVTFSMLE 57
Score = 30.3 bits (65), Expect = 0.24
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 511 TEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYF 621
TEQ++ + F ++GP+ ++V D T RS G F+ F
Sbjct: 289 TEQELYNHFRQFGPLAYAKLVKDPATDRSLGRGFIKF 325
>SPAC23A1.09 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 121
Score = 37.9 bits (84), Expect = 0.001
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +1
Query: 487 VFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDME 633
V G+ TE+Q+ +F+ +GPV + + +D +TG +G+ + + +E
Sbjct: 14 VTGVHPEATEEQVEDLFADFGPVKNLHLNLDRRTGYVKGYALIEYATLE 62
>SPAC3G6.04 |rnp24||RNA-binding protein Rnp24|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 369
Score = 37.1 bits (82), Expect = 0.002
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +1
Query: 469 PSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDME 633
PS L V L TT+ + F + G + +V+++ TG+ +GF FV F D++
Sbjct: 226 PSSILFVGNLDFETTDADLKEHFGQVGQIRRVRLMTFEDTGKCKGFGFVDFPDID 280
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 37.1 bits (82), Expect = 0.002
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +1
Query: 469 PSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDME 633
PS + V LS TE ++ F G + +++ D ++GR +GF +V F D++
Sbjct: 364 PSDTVFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDID 418
Score = 36.7 bits (81), Expect = 0.003
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +1
Query: 496 LSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDME 633
LS +Q + F +YG + +V++D ++GRS+G+ +V FE E
Sbjct: 270 LSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPE 315
>SPBC887.05c |cwf29||RNA-binding protein Cwf29|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 217
Score = 37.1 bits (82), Expect = 0.002
Identities = 18/39 (46%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Frame = +1
Query: 514 EQQINHIFSKYG-PVDKVQVVIDAKTGRSRGFCFVYFED 627
E I +FS++G PVD + +V D +TG+S+GF F+ +ED
Sbjct: 44 EDDILCVFSEFGEPVD-INLVRDKETGKSKGFAFLKYED 81
>SPCC1827.05c |||nucleolar RNA-binding protein NIFK
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 276
Score = 36.3 bits (80), Expect = 0.004
Identities = 14/40 (35%), Positives = 28/40 (70%)
Frame = +1
Query: 514 EQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDME 633
E+Q+ FS++GPV ++++ + KTG S+ + F+ FE ++
Sbjct: 118 EKQMRMYFSQFGPVLRLRMSRNRKTGSSKHYAFIEFESLD 157
>SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 833
Score = 35.5 bits (78), Expect = 0.006
Identities = 15/67 (22%), Positives = 36/67 (53%)
Frame = +1
Query: 433 LGDRVRLLENPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCF 612
+ ++ R ++ + ++ L + L+ E + +F +G +++V + ID KT +GF +
Sbjct: 309 VSEQERNIQLISETKRLFLRNLTYSCAEDDLKSLFGPFGQLEQVHMPIDKKTNNPKGFAY 368
Query: 613 VYFEDME 633
+ F D +
Sbjct: 369 IDFHDAD 375
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 35.1 bits (77), Expect = 0.008
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +1
Query: 448 RLLENPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYF 621
+L E R + V L+ T +++ F + GPV Q+V D +GRS+G +V F
Sbjct: 231 KLSEEERDRRTVFVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEF 288
>SPAC328.05 |||RNA-binding protein involved in export of
mRNAs|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 32.3 bits (70), Expect = 0.060
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +1
Query: 472 SRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFED 627
S C+ V L T+++ + +F+ G V + ++ + TGRS+GF V FE+
Sbjct: 279 SDCIYVGNLPWATSDRNLLDLFTDIGSVIRARIAYEP-TGRSKGFGVVQFEN 329
>SPBC18H10.04c |sce3|tif48|translation initiation factor
eIF4B|Schizosaccharomyces pombe|chr 2|||Manual
Length = 388
Score = 31.9 bits (69), Expect = 0.079
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +1
Query: 487 VFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFE 624
V LS TE + F + V +++VID T RSRGF +V FE
Sbjct: 98 VGNLSFDLTENDLGDFFGE--GVTSIRLVIDPLTERSRGFGYVEFE 141
>SPAC22E12.02 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 31.5 bits (68), Expect = 0.10
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +1
Query: 514 EQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDME 633
++ + FS+Y + K +VV D + G++RGF FV F+D +
Sbjct: 43 DESLYQAFSEYPSLVKTKVVRD-REGKTRGFGFVSFKDSD 81
>SPBC29A10.02 |spo5|mrb1, mug12, SPBC365.18|meiotic RNA-binding
protein 1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 567
Score = 31.5 bits (68), Expect = 0.10
Identities = 14/58 (24%), Positives = 33/58 (56%)
Frame = +1
Query: 454 LENPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFED 627
+E+ + +R + + GL T+++ + +++G V + +ID +T +G+ F FE+
Sbjct: 289 MESTSRTRNVYIRGLPPNTSDENLLLYTNRFGKVSSSKAIIDMETNLCKGYGFACFEE 346
>SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 30.3 bits (65), Expect = 0.24
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +1
Query: 487 VFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFED 627
+ L L E Q+ + +G + Q++ + G S+GFCF F++
Sbjct: 314 ISNLPLNLGEDQVVELLKPFGDLLSFQLIKNIADGSSKGFCFCEFKN 360
>SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 710
Score = 28.3 bits (60), Expect = 0.97
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +1
Query: 499 SLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDME 633
++ T + Q+ +FS +G + + +G S+G+ FV F +E
Sbjct: 392 TVITCKSQLEDLFSPFGSILSSMLACYPNSGISKGYGFVAFRQIE 436
>SPAC31G5.04 |||homoisocitrate dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 362
Score = 27.5 bits (58), Expect = 1.7
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Frame = -2
Query: 233 RLRLCPLDITAGFGT----GSREPLRVLERLLSRSDIAMFLVNKRDKSEISRIFS-INTL 69
+L+ +D+ AG+GT G P R +ERL + + A+F + +++ S I L
Sbjct: 37 KLKFDFIDLDAGWGTFERTGKALPERTVERLKTECNAALFGAVQSPTHKVAGYSSPIVAL 96
Query: 68 KRSTSIYRRDRTLKT 24
++ +Y R +K+
Sbjct: 97 RKKMGLYANVRPVKS 111
>SPBC106.12c |||THO complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 274
Score = 27.5 bits (58), Expect = 1.7
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 487 VFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFE 624
V L E+ + +F + P+ +V + D + GRS G C VYFE
Sbjct: 89 VENLHYQVLEKDVLSLFENFHPI-RVIMNYD-RAGRSEGSCDVYFE 132
>SPBC23E6.01c ||SPBPJ758.01|RNA-binding protein, rrm
type|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 27.5 bits (58), Expect = 1.7
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 496 LSLYTTEQQINHIF-SKYGPVDKVQVVIDAKTGRSRGFCFVYFED 627
LS E + +F S+Y +++ D +T SRG+ FV F D
Sbjct: 193 LSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYGFVRFTD 237
>SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 609
Score = 27.1 bits (57), Expect = 2.3
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 517 QQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYF 621
QQ+ +FSK+G + + T S+G+ FV F
Sbjct: 435 QQLEELFSKFGRIKSCTLASYPSTEISKGYGFVSF 469
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 27.1 bits (57), Expect = 2.3
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -2
Query: 614 TKQNPRERPVFASITTCTLSTGPYLEKIW 528
+K NP + P A++T C T +++K+W
Sbjct: 103 SKNNPNQNPQAAALTKCREQT--FVDKVW 129
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 25.8 bits (54), Expect = 5.2
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 55 EVDLLSVLIENIRDISLLSLLLTRNIAMSDRERSRSRTRNGSREPVPKPAVMSRGH 222
E D S +E++ ++LSL + I +SD E S +R+ + K ++GH
Sbjct: 113 ETDSSSTSVEDVNKENILSLNDSCLIKLSDDEASNKSSRSSTPRNSIKSNSSNQGH 168
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,274,208
Number of Sequences: 5004
Number of extensions: 41836
Number of successful extensions: 135
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 135
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 281707720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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