Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23h09
         (511 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0932 + 24519204-24519380,24520074-24520128,24520251-245222...    27   8.8  

>12_02_0932 + 24519204-24519380,24520074-24520128,24520251-24522202,
            24522288-24522446,24522878-24523049,24523131-24523429,
            24524037-24524285
          Length = 1020

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 13/53 (24%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
 Frame = -2

Query: 222  QLGRISLMRHTYVKYTFC---SDKLLFSFIFDSFIRQFGDYFKMSRIRLIASL 73
            ++ +I+++R     Y F    +  ++F FI   F+ +F +   ++R++ IAS+
Sbjct: 947  EMEKINVLRGILKNYVFLGVLTSTVVFQFIMVQFLGEFANTIPLTRLQWIASV 999


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,054,596
Number of Sequences: 37544
Number of extensions: 186708
Number of successful extensions: 380
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 380
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1095026320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)