Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23h09
         (511 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011483-1|AAR99141.1|  913|Drosophila melanogaster RE03641p pro...    29   4.8  
AY268106-1|AAP03646.1|  913|Drosophila melanogaster painless pro...    29   4.8  
AE013599-3983|AAF47293.1|  913|Drosophila melanogaster CG15860-P...    29   4.8  
AY051941-1|AAK93365.1|  565|Drosophila melanogaster LD41932p pro...    28   8.4  
AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-P...    28   8.4  
AE014296-2022|AAS65017.1|  416|Drosophila melanogaster CG6024-PB...    28   8.4  
AE014296-2021|AAF50016.2|  416|Drosophila melanogaster CG6024-PA...    28   8.4  

>BT011483-1|AAR99141.1|  913|Drosophila melanogaster RE03641p
           protein.
          Length = 913

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -3

Query: 224 YSLAVYH**DTRMLNTHFVLISYFSVSYLI 135
           Y+L  +H  D R L   F L+S+  +SYLI
Sbjct: 512 YTLLKFHESDQRALTAFFGLLSWLGISYLI 541


>AY268106-1|AAP03646.1|  913|Drosophila melanogaster painless
           protein.
          Length = 913

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -3

Query: 224 YSLAVYH**DTRMLNTHFVLISYFSVSYLI 135
           Y+L  +H  D R L   F L+S+  +SYLI
Sbjct: 512 YTLLKFHESDQRALTAFFGLLSWLGISYLI 541


>AE013599-3983|AAF47293.1|  913|Drosophila melanogaster CG15860-PA
           protein.
          Length = 913

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -3

Query: 224 YSLAVYH**DTRMLNTHFVLISYFSVSYLI 135
           Y+L  +H  D R L   F L+S+  +SYLI
Sbjct: 512 YTLLKFHESDQRALTAFFGLLSWLGISYLI 541


>AY051941-1|AAK93365.1|  565|Drosophila melanogaster LD41932p
           protein.
          Length = 565

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
 Frame = +2

Query: 275 EQEDKEADCEDVPILVERSKALHELIVSK---KKSPNDNNGLKQKNETEP 415
           +Q ++E D E++  L+  S    +L V     +  P+D+ G++++ ETEP
Sbjct: 360 QQREREPDDEELRPLISISMCDSQLDVPDIPVRAMPDDDEGVEEEPETEP 409


>AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-PA
            protein.
          Length = 1168

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
 Frame = +2

Query: 275  EQEDKEADCEDVPILVERSKALHELIVSK---KKSPNDNNGLKQKNETEP 415
            +Q ++E D E++  L+  S    +L V     +  P+D+ G++++ ETEP
Sbjct: 963  QQREREPDDEELRPLISISMCDSQLDVPDIPVRAMPDDDEGVEEEPETEP 1012


>AE014296-2022|AAS65017.1|  416|Drosophila melanogaster CG6024-PB,
           isoform B protein.
          Length = 416

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 188 YVCLISDIRPSCNTRDSGQNKPSFNFVNNEQEDK 289
           Y+ + + +RP C T  +G   P+ N V   Q+D+
Sbjct: 361 YLKMATKVRPICQTNIAGTGHPNANAVGAAQKDE 394


>AE014296-2021|AAF50016.2|  416|Drosophila melanogaster CG6024-PA,
           isoform A protein.
          Length = 416

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 188 YVCLISDIRPSCNTRDSGQNKPSFNFVNNEQEDK 289
           Y+ + + +RP C T  +G   P+ N V   Q+D+
Sbjct: 361 YLKMATKVRPICQTNIAGTGHPNANAVGAAQKDE 394


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,471,197
Number of Sequences: 53049
Number of extensions: 354690
Number of successful extensions: 718
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1846255872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)