Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23h09
         (511 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54236-4|CAA90984.1| 1274|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z81526-5|CAB04262.1|  983|Caenorhabditis elegans Hypothetical pr...    27   6.0  
Z68114-10|CAA92157.2|  322|Caenorhabditis elegans Hypothetical p...    27   6.0  
AF067622-2|AAK68367.1|  651|Caenorhabditis elegans Hypothetical ...    27   6.0  
Z83104-7|CAH60780.1|  762|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z70685-2|CAA94606.2|  762|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>Z54236-4|CAA90984.1| 1274|Caenorhabditis elegans Hypothetical
           protein C27B7.4 protein.
          Length = 1274

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +2

Query: 170 QNVYLTYVCLISDIRPS-CNTRDSGQNKPSFNFVNNEQEDKEADCEDVPILVERSKALHE 346
           QN  L Y C+I  +RP    TR S  ++      N +  D   D  DV I ++R+  L E
Sbjct: 496 QNNLLEYFCMIDFVRPKYLGTRKSFIDRFEKPIKNGQCVDSSPD--DVKIALQRTHVLVE 553

Query: 347 LI 352
           L+
Sbjct: 554 LV 555


>Z81526-5|CAB04262.1|  983|Caenorhabditis elegans Hypothetical
           protein F33H2.1 protein.
          Length = 983

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 432 VLEXAAGSVSFFCLSPLLSFGDFFLDTIS 346
           + E    ++S +C+SP LSF D F +T S
Sbjct: 654 ISEGCKTTISLWCMSPALSFFDAFNETRS 682


>Z68114-10|CAA92157.2|  322|Caenorhabditis elegans Hypothetical
           protein F17A2.13 protein.
          Length = 322

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 16/67 (23%), Positives = 33/67 (49%)
 Frame = +2

Query: 203 SDIRPSCNTRDSGQNKPSFNFVNNEQEDKEADCEDVPILVERSKALHELIVSKKKSPNDN 382
           +D++ + + +++ +N+    F  NE E KE    + PIL   S+    L + K     DN
Sbjct: 99  ADVQENFDEQENAKNENDEVFYENENEAKEL--VETPILRSLSRQFSGLTIIKSHIKKDN 156

Query: 383 NGLKQKN 403
             ++ ++
Sbjct: 157 LDVESRS 163


>AF067622-2|AAK68367.1|  651|Caenorhabditis elegans Hypothetical
           protein F33E11.3 protein.
          Length = 651

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 13/42 (30%), Positives = 26/42 (61%)
 Frame = +2

Query: 275 EQEDKEADCEDVPILVERSKALHELIVSKKKSPNDNNGLKQK 400
           ++ED+E D +D P L E  K + E++   +++P  ++ LK +
Sbjct: 456 DEEDEEEDFKDAPELPEEPKTVPEVV---EEAPKTHDHLKSE 494


>Z83104-7|CAH60780.1|  762|Caenorhabditis elegans Hypothetical
           protein R07D5.2 protein.
          Length = 762

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 6/34 (17%)
 Frame = -2

Query: 390 SPLLSFGDFFLDTISSCSAF------ERSTKIGT 307
           +PLL F DFFL    +CS F      +RST I T
Sbjct: 194 APLLKFQDFFLRFSRNCSTFKGFISQDRSTNITT 227


>Z70685-2|CAA94606.2|  762|Caenorhabditis elegans Hypothetical
           protein R07D5.2 protein.
          Length = 762

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 6/34 (17%)
 Frame = -2

Query: 390 SPLLSFGDFFLDTISSCSAF------ERSTKIGT 307
           +PLL F DFFL    +CS F      +RST I T
Sbjct: 194 APLLKFQDFFLRFSRNCSTFKGFISQDRSTNITT 227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,525,073
Number of Sequences: 27780
Number of extensions: 200839
Number of successful extensions: 551
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 551
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)