Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23g09
         (611 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D25304-1|BAA04985.1|  773|Homo sapiens KIAA0006 protein.               31   3.2  
D13631-1|BAA02796.1|  453|Homo sapiens KIAA0006 protein.               31   3.2  
BC039856-1|AAH39856.1|  776|Homo sapiens Rac/Cdc42 guanine nucle...    31   3.2  
BC033768-1|AAH33768.1|  320|Homo sapiens Similar to Rac/Cdc42 gu...    31   3.2  
AL683813-1|CAI39443.1|  776|Homo sapiens Rac/Cdc42 guanine nucle...    31   3.2  
AL135783-5|CAI42903.1|  622|Homo sapiens Rac/Cdc42 guanine nucle...    31   3.2  
AL135783-1|CAI42899.1|  776|Homo sapiens Rac/Cdc42 guanine nucle...    31   3.2  

>D25304-1|BAA04985.1|  773|Homo sapiens KIAA0006 protein.
          Length = 773

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -2

Query: 529 LGVIEANLTMTNFTQGDLAAPSNTQVPRPKARLVSSQSSFLIAATRSHGKT 377
           L VIEA  T  NF QG  ++     +P+    L+  +   +I  TRS+G+T
Sbjct: 657 LKVIEAYCTSANFQQGHGSSTRKDSIPQV---LLPEEEKLIIEETRSNGQT 704


>D13631-1|BAA02796.1|  453|Homo sapiens KIAA0006 protein.
          Length = 453

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -2

Query: 529 LGVIEANLTMTNFTQGDLAAPSNTQVPRPKARLVSSQSSFLIAATRSHGKT 377
           L VIEA  T  NF QG  ++     +P+    L+  +   +I  TRS+G+T
Sbjct: 337 LKVIEAYCTSANFQQGHGSSTRKDSIPQV---LLPEEEKLIIEETRSNGQT 384


>BC039856-1|AAH39856.1|  776|Homo sapiens Rac/Cdc42 guanine
           nucleotide exchange factor (GEF) 6 protein.
          Length = 776

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -2

Query: 529 LGVIEANLTMTNFTQGDLAAPSNTQVPRPKARLVSSQSSFLIAATRSHGKT 377
           L VIEA  T  NF QG  ++     +P+    L+  +   +I  TRS+G+T
Sbjct: 660 LKVIEAYCTSANFQQGHGSSTRKDSIPQV---LLPEEEKLIIEETRSNGQT 707


>BC033768-1|AAH33768.1|  320|Homo sapiens Similar to Rac/Cdc42
           guanine nucleotide exchange factor (GEF) 6 protein.
          Length = 320

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -2

Query: 529 LGVIEANLTMTNFTQGDLAAPSNTQVPRPKARLVSSQSSFLIAATRSHGKT 377
           L VIEA  T  NF QG  ++     +P+    L+  +   +I  TRS+G+T
Sbjct: 204 LKVIEAYCTSANFQQGHGSSTRKDSIPQV---LLPEEEKLIIEETRSNGQT 251


>AL683813-1|CAI39443.1|  776|Homo sapiens Rac/Cdc42 guanine
           nucleotide exchange factor (GEF) 6 protein.
          Length = 776

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -2

Query: 529 LGVIEANLTMTNFTQGDLAAPSNTQVPRPKARLVSSQSSFLIAATRSHGKT 377
           L VIEA  T  NF QG  ++     +P+    L+  +   +I  TRS+G+T
Sbjct: 660 LKVIEAYCTSANFQQGHGSSTRKDSIPQV---LLPEEEKLIIEETRSNGQT 707


>AL135783-5|CAI42903.1|  622|Homo sapiens Rac/Cdc42 guanine
           nucleotide exchange factor (GEF) 6 protein.
          Length = 622

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -2

Query: 529 LGVIEANLTMTNFTQGDLAAPSNTQVPRPKARLVSSQSSFLIAATRSHGKT 377
           L VIEA  T  NF QG  ++     +P+    L+  +   +I  TRS+G+T
Sbjct: 506 LKVIEAYCTSANFQQGHGSSTRKDSIPQV---LLPEEEKLIIEETRSNGQT 553


>AL135783-1|CAI42899.1|  776|Homo sapiens Rac/Cdc42 guanine
           nucleotide exchange factor (GEF) 6 protein.
          Length = 776

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -2

Query: 529 LGVIEANLTMTNFTQGDLAAPSNTQVPRPKARLVSSQSSFLIAATRSHGKT 377
           L VIEA  T  NF QG  ++     +P+    L+  +   +I  TRS+G+T
Sbjct: 660 LKVIEAYCTSANFQQGHGSSTRKDSIPQV---LLPEEEKLIIEETRSNGQT 707


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,366,301
Number of Sequences: 237096
Number of extensions: 1773353
Number of successful extensions: 3472
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3472
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)