Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23g05
         (155 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    22   0.80 
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              20   3.2  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    19   7.4  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    19   7.4  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    18   9.8  

>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 0.80
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -2

Query: 154 FFFPFALLIL 125
           FFFPF+ LIL
Sbjct: 365 FFFPFSFLIL 374


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 29  YSFQDLDVCFSEHCKYEL 82
           +SF D D  F+EH   E+
Sbjct: 70  FSFVDKDGNFNEHVSREI 87


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +1

Query: 4   SCHEWVVALQFSRFRCLFQ 60
           S  EW+ +++ SR+   F+
Sbjct: 926 SVSEWLASIKMSRYAESFE 944


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 47  LNLENCKATTHSWQE 3
           +NL+N   TT+ W E
Sbjct: 73  MNLKNQVMTTNVWVE 87


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 73  IRVIYIVLNIVSMVMNIKVSKVQTEKK 153
           I +IY    IVS V+N + +  +  KK
Sbjct: 225 ILIIYYYSQIVSHVVNHEKALREQAKK 251


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,725
Number of Sequences: 438
Number of extensions: 555
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 31
effective length of database: 132,765
effective search space used:  2655300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)