Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23g02
(729 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0338 - 21121289-21121350,21121456-21121528,21121808-211218... 97 1e-20
01_06_1254 + 35761046-35761162,35761332-35761416,35761877-357620... 38 0.011
11_06_0061 - 19702893-19703869,19703960-19704098,19704166-197042... 33 0.023
03_06_0326 + 33150599-33150907,33151013-33151104,33151961-331520... 32 0.54
01_06_1095 - 34484064-34484492,34484716-34485041,34485505-34485955 30 2.2
01_06_0256 - 27923497-27923855,27923944-27924016,27924116-27924121 30 2.2
07_03_1418 - 26421341-26421527,26421618-26423157,26424293-26424524 29 2.9
11_04_0097 + 13448740-13450725 29 5.0
03_01_0093 - 745434-746057,746492-747112,747222-747791,747870-74... 29 5.0
12_02_0953 - 24736642-24736673,24737104-24737188,24737267-247373... 28 6.6
>01_05_0338 -
21121289-21121350,21121456-21121528,21121808-21121892,
21122031-21122122,21122479-21122607,21123253-21123310,
21123448-21123517,21123643-21123676,21123850-21123917,
21124057-21124261
Length = 291
Score = 97.1 bits (231), Expect = 1e-20
Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 15/199 (7%)
Frame = +2
Query: 134 DYNYEQTSEVEALDSIYFGDMTVIE--------TKPFHKFSIPIKSEGFDDGEGLACHL- 286
DY EQ EVEAL +I D+ I+ T + + + + FD+ + L
Sbjct: 47 DYEQEQEMEVEALQAILMDDIKEIDPSESGLSTTARCFQIVLSPQDDDFDESAYVPVQLA 106
Query: 287 -VFTYTSKYPDELPIIEIDNEENFDNIVDKEELLTHLAEQGKENLGMVMVFTLVSAGQEW 463
+F +T KYPDE P++ + + + D L L ++ ENLGM MV+TLV++ Q+W
Sbjct: 107 LIFAHTEKYPDEPPLLNVKSVRGMKS-EDLASLKEKLEQEATENLGMAMVYTLVTSAQDW 165
Query: 464 LNETWDKVKKEREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEIDMGIP-AKRE 640
L+E + + + E +++ EE E+ G VTVESFLAWR +FE ++ + AK
Sbjct: 166 LSEKYGQNAGDGE----SEENEAEEEEVIVPHGEAVTVESFLAWRDRFEAELALQRAKLM 221
Query: 641 RE----AKDKNKLTGRELF 685
E A + KL+GR+ F
Sbjct: 222 PESALTAPKEKKLSGRQYF 240
>01_06_1254 +
35761046-35761162,35761332-35761416,35761877-35762017,
35762118-35762206,35762519-35762701,35763509-35763697,
35763808-35763938,35764023-35764125,35765123-35765308
Length = 407
Score = 37.5 bits (83), Expect = 0.011
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +2
Query: 482 KVKKEREERILAKQKADEEAELKRFEGTRVTVESFLAWR--KQFEIDMGIPAKREREAKD 655
K E E +A + E+ K T +T + F+ W+ K E + G+ A R AK+
Sbjct: 249 KALLEEESEKIAIEDEIEDQRKKVKTTTPMTTDLFMEWKRKKAEEREAGLAALRAERAKN 308
Query: 656 KNKLTGRELFLXDTTLNESD 715
++++GRELF+ D+++ D
Sbjct: 309 -DRMSGRELFMADSSVFVDD 327
>11_06_0061 - 19702893-19703869,19703960-19704098,19704166-19704287,
19704362-19704416,19704508-19704624,19704718-19705413,
19706358-19706393,19707190-19708236
Length = 1062
Score = 32.7 bits (71), Expect(2) = 0.023
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Frame = +2
Query: 185 FGDMTVIETKPFHKFSIPIKSEGFDDGEGLACHLVFTYTSKYPDELPIIEIDNEENFDNI 364
F +M V P +P+K EG A L+++YT + + D+ E F+
Sbjct: 872 FEEMDVFRKMPQQPHFLPLKHHPLGLREGTALGLMWSYTDAVDNISKLCITDSMEIFE-- 929
Query: 365 VDKEELLTHLAEQGKENLGMVMVFT-LVSAGQEWLNETWD--KVKKEREERILAKQKAD 532
D + LT L E G + + T L+ ++ N D K+K++ ++ A + D
Sbjct: 930 -DHIKTLTILEENGFSVQSLQQILTKLLQIRSDYTNSLRDGEKLKEQIADKAFAVSRVD 987
Score = 22.6 bits (46), Expect(2) = 0.023
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 512 LAKQKADEEAELKRFEGTRVTVE 580
++K+K DE+AEL R + E
Sbjct: 1014 MSKKKEDEDAELSRLKAENNNAE 1036
>03_06_0326 +
33150599-33150907,33151013-33151104,33151961-33152057,
33152585-33152656,33152750-33152812,33152905-33153045,
33153603-33153698,33154120-33154404,33154692-33154851,
33154947-33155089,33155688-33155861,33156386-33156652,
33156737-33156856
Length = 672
Score = 31.9 bits (69), Expect = 0.54
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2
Query: 479 DKVKKEREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEID 616
+KVKK REER + K + +EE L E R + + ++F D
Sbjct: 170 EKVKKRREERAIEKAQHEEEMALLARERARAEFQDWEKKEEEFHFD 215
>01_06_1095 - 34484064-34484492,34484716-34485041,34485505-34485955
Length = 401
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +2
Query: 344 EENFDNIVDKEELLTHLAEQGKENLGMVMVFTLVSAGQEW-LNETWDKVKKEREERILAK 520
EEN +N+ LL +E +E + + + QEW E + +K + +E++ +
Sbjct: 31 EENLENLEQPLPLLMPSSEDHREQQLVPVPWLQQDQDQEWHEQEQFLPLKNQNQEQLQDQ 90
Query: 521 QKADEEAELKRFEG 562
Q ++ E +R+ G
Sbjct: 91 QPLQDQEETRRYLG 104
>01_06_0256 - 27923497-27923855,27923944-27924016,27924116-27924121
Length = 145
Score = 29.9 bits (64), Expect = 2.2
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = +2
Query: 308 YPDELPIIEIDNEENFDNIVDKEELLTHLAEQGKENLGMVMVFTLVSAGQEWLNETWDKV 487
+ DE + + E + IVDK L H ++GKE MV + + ++ E +K
Sbjct: 33 FDDEKSTLTVIGEVDVVVIVDK---LRH-PKKGKEKREGYMVEVMAVSDEK--KEAEEKK 86
Query: 488 KKEREERILAKQKADEEAELKRFE 559
KK+ EE+ K+K EE E K+ E
Sbjct: 87 KKDEEEK-KKKEKEKEEEEKKKKE 109
>07_03_1418 - 26421341-26421527,26421618-26423157,26424293-26424524
Length = 652
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/50 (36%), Positives = 21/50 (42%)
Frame = +3
Query: 276 PAI*YLLTHQSILMNYPLLKLTMRRISTILLIKRNFSHILLNRVKKTWEW 425
P YLL + L KLTMRR + +L N S L K W W
Sbjct: 100 PPANYLLISGDRDFSNALHKLTMRRYNILLAQPPNVSQALTAAAKSVWLW 149
>11_04_0097 + 13448740-13450725
Length = 661
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2
Query: 479 DKVKKEREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEID 616
+ + KE EER A+ KA EEA + +R +E+ L +K+ E D
Sbjct: 581 EALAKEEEERKKAEAKAKEEAAAR---ASRAAIEAVLGRKKEGEND 623
>03_01_0093 -
745434-746057,746492-747112,747222-747791,747870-747948,
748258-748331,748385-748387
Length = 656
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 545 LKRFEGTRVTVESFLAWRKQFEIDMGIPAKREREAKDKNKLTG 673
++ EGTR T S +A+ ++ E+ +G PAKR+ +N G
Sbjct: 57 IENSEGTRTT-PSVVAFNQKGELLVGTPAKRQAVTNPQNTFFG 98
>12_02_0953 - 24736642-24736673,24737104-24737188,24737267-24737386,
24737484-24737549,24737629-24737799,24737901-24737999,
24738075-24738186,24738282-24738343,24738412-24738483,
24738583-24738681,24738764-24738997,24739104-24739178,
24739299-24739386,24739478-24739638,24739734-24739841,
24739934-24741922,24742007-24742279,24742957-24743295,
24743449-24745038,24745166-24745241,24745333-24745412,
24745614-24745679,24745761-24745830,24745899-24746134,
24746149-24746319,24746915-24747097,24747176-24747241,
24747326-24747389,24747472-24747530,24747612-24747699,
24747799-24747891,24747956-24748116,24748215-24748307,
24748405-24748518,24748654-24748773,24748852-24748935,
24749016-24749171,24749518-24750154,24752874-24752929
Length = 2815
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +2
Query: 455 QEWLNETWDKVKKEREERILAKQKADE----EAELKRFEGTRVTVESFLAWRKQFE 610
Q + + KV + + E I+ K+K E E E+K E + T ESF++W K+ E
Sbjct: 1480 QRTIKDVSAKVLQLKSE-IIDKEKGYEARLKELEIKMQEKEKDTAESFISWNKERE 1534
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,110,276
Number of Sequences: 37544
Number of extensions: 331898
Number of successful extensions: 786
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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