Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23g02
(729 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82053-3|CAB04837.2| 240|Caenorhabditis elegans Hypothetical pr... 124 9e-29
Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical pr... 38 0.007
U80839-12|AAB37918.1| 252|Caenorhabditis elegans Hypothetical p... 33 0.28
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 32 0.37
Z81119-2|CAB03332.1| 350|Caenorhabditis elegans Hypothetical pr... 31 1.1
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 31 1.1
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 31 1.1
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 31 1.1
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 31 1.1
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF025458-3|AAB70976.1| 612|Caenorhabditis elegans Hypothetical ... 30 1.9
U97007-5|AAB52295.1| 564|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81546-7|CAB04452.1| 320|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF292048-1|AAG41144.1| 133|Caenorhabditis elegans 3A339 protein. 29 4.5
AF164431-1|AAF82633.1| 320|Caenorhabditis elegans NUD-1 protein. 29 4.5
AF099913-14|AAC68745.1| 133|Caenorhabditis elegans Hypothetical... 29 4.5
Z99281-53|CAB16519.2| 677|Caenorhabditis elegans Hypothetical p... 28 5.9
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 28 5.9
>Z82053-3|CAB04837.2| 240|Caenorhabditis elegans Hypothetical
protein T26E3.4 protein.
Length = 240
Score = 124 bits (298), Expect = 9e-29
Identities = 73/206 (35%), Positives = 117/206 (56%), Gaps = 7/206 (3%)
Frame = +2
Query: 131 MDYNYEQTSEVEALDSIYFGDMTVIETK--PFHKFSIPIKSEGFDD--GEGLACHLVFTY 298
M + +Q E+EAL++IY + + ++ P + SI +KS ++D + L +
Sbjct: 1 MSHQEQQEQEIEALEAIYSEEEIHVASRDYPNIELSIQLKSNQYEDPTDDDFDVELGIEF 60
Query: 299 TSKYPDELPIIEIDNEENFDNIVDKEELLTHLAEQGKENLGMVMVFTLVSAGQEWLNETW 478
T YPDE+PII ++ E+ E + L +ENLGMVMVF +VSA Q+ + E
Sbjct: 61 TENYPDEIPIITLNGIEDAFTAERIAESIDKLRSVAEENLGMVMVFAIVSALQDEIGELV 120
Query: 479 DKVKKEREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEIDMGI---PAKREREA 649
D K+ +EE++ +++ E K+FEGT VT ++F AW+ +F+ + A++ER A
Sbjct: 121 DVKKRAKEEKVEIEKEKKEAESRKKFEGTVVTPDTFRAWKDRFDEERKAEIDAAEKERLA 180
Query: 650 KDKNKLTGRELFLXDTTLNESDLKFL 727
+LTGR+LFL D TLN SD+ +
Sbjct: 181 SLAGRLTGRQLFLRDATLNLSDVTLI 206
>Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical
protein F27D4.4a protein.
Length = 374
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/85 (27%), Positives = 50/85 (58%), Gaps = 8/85 (9%)
Frame = +2
Query: 485 VKKEREERILAKQKADEE-AELKRFEGTRVTVESFLAWRK------QFEIDMGIPAKRER 643
+++++E+ I ++ ++E A L T++T+++F+AW+K + + + + K+E+
Sbjct: 211 MEQQKEDEISIEELVEKERAALSSKNLTKLTLQTFIAWKKKKLRERKEKEEADLKEKKEK 270
Query: 644 EAKDK-NKLTGRELFLXDTTLNESD 715
K N ++GR+LFL D L +D
Sbjct: 271 IKSGKHNGMSGRDLFLYDANLVNND 295
>U80839-12|AAB37918.1| 252|Caenorhabditis elegans Hypothetical
protein ZC204.12 protein.
Length = 252
Score = 32.7 bits (71), Expect = 0.28
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Frame = +2
Query: 407 KENLGMVMVFTLVSAGQEWLNETWDK----VKKEREERILAK-QKADEEAELKRFEGTRV 571
K+ + + FTL+ AGQE LN+T K KK E + A + + E ++ R
Sbjct: 62 KKKISIKAEFTLLCAGQEPLNKTEKKDSDCTKKSTEYEVCAMFTECETENHFEKGSDLRF 121
Query: 572 TVESFLAWR---KQFEIDMGIPAKREREAKDKNKLTGRELFLXDTTLNESDLK 721
VE + K+ + AK+E K+ +K+ G E + D ++ LK
Sbjct: 122 EVELTIVMENSSKKSSVKPKPEAKQE-PTKENDKIVGSESMMLDQLTSKLFLK 173
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +2
Query: 464 LNETWDKVKKEREERILAKQKADEE---AELKRFEGTRVTVESFLAWRKQFEIDMGIPAK 634
L+ +DK++ + E L K + D E A+ K+F+ +E +L K+ E D P
Sbjct: 1276 LHYYYDKLQTDYYEPYLKKDEKDPELLAAKKKKFKEDGNNLEEYLG-EKRKEFDEKNPGY 1334
Query: 635 REREAKDK 658
RE++ KDK
Sbjct: 1335 REKQQKDK 1342
>Z81119-2|CAB03332.1| 350|Caenorhabditis elegans Hypothetical
protein T10H4.3 protein.
Length = 350
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -1
Query: 105 YVFLIYKFFTFLLQTILKFTLLFKLRMVEKK 13
++ +I +FF LL +L TLL +L M++KK
Sbjct: 201 FIEIIIRFFQTLLYPMLTLTLLLQLHMIKKK 231
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/75 (28%), Positives = 43/75 (57%)
Frame = +2
Query: 455 QEWLNETWDKVKKEREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEIDMGIPAK 634
+E L + ++ + ER ERI +Q ++ +++R + R E R++FE+ A+
Sbjct: 525 RERLRKRQEREEAERLERIRLEQ---QKIDMERIDAERRERERKEEERREFELIEA--AR 579
Query: 635 REREAKDKNKLTGRE 679
R++EA+D+++L E
Sbjct: 580 RKKEARDRDRLDEME 594
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/75 (28%), Positives = 43/75 (57%)
Frame = +2
Query: 455 QEWLNETWDKVKKEREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEIDMGIPAK 634
+E L + ++ + ER ERI +Q ++ +++R + R E R++FE+ A+
Sbjct: 525 RERLRKRQEREEAERLERIRLEQ---QKIDMERIDAERRERERKEEERREFELIEA--AR 579
Query: 635 REREAKDKNKLTGRE 679
R++EA+D+++L E
Sbjct: 580 RKKEARDRDRLDEME 594
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/75 (28%), Positives = 43/75 (57%)
Frame = +2
Query: 455 QEWLNETWDKVKKEREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEIDMGIPAK 634
+E L + ++ + ER ERI +Q ++ +++R + R E R++FE+ A+
Sbjct: 525 RERLRKRQEREEAERLERIRLEQ---QKIDMERIDAERRERERKEEERREFELIEA--AR 579
Query: 635 REREAKDKNKLTGRE 679
R++EA+D+++L E
Sbjct: 580 RKKEARDRDRLDEME 594
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/75 (28%), Positives = 43/75 (57%)
Frame = +2
Query: 455 QEWLNETWDKVKKEREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEIDMGIPAK 634
+E L + ++ + ER ERI +Q ++ +++R + R E R++FE+ A+
Sbjct: 525 RERLRKRQEREEAERLERIRLEQ---QKIDMERIDAERRERERKEEERREFELIEA--AR 579
Query: 635 REREAKDKNKLTGRE 679
R++EA+D+++L E
Sbjct: 580 RKKEARDRDRLDEME 594
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/58 (27%), Positives = 33/58 (56%)
Frame = +2
Query: 491 KEREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEIDMGIPAKREREAKDKNK 664
K+++E++ KQ+ +EEA +K E + + A +KQ E + + A+ E + ++ K
Sbjct: 519 KKKQEKLELKQREEEEARIKEEEEKQRKILEEEARKKQEEEEARLKAEEELKIYEEEK 576
>AF025458-3|AAB70976.1| 612|Caenorhabditis elegans Hypothetical
protein C01B12.3 protein.
Length = 612
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/71 (26%), Positives = 30/71 (42%)
Frame = +2
Query: 443 VSAGQEWLNETWDKVKKEREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEIDMG 622
V++ Q W NE+ +K+E E + K D E+ + S L D+G
Sbjct: 544 VASSQSWFNESLPVIKEEEEAK--RKSNTDTESPKSSKHSSMSIRRSELRRSSSSGSDLG 601
Query: 623 IPAKREREAKD 655
KRER+ +
Sbjct: 602 KSGKRERKKSE 612
>U97007-5|AAB52295.1| 564|Caenorhabditis elegans Hypothetical
protein ZC196.5 protein.
Length = 564
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +2
Query: 437 TLVSAGQEWLNETWDKVKKEREERILAKQKADEEAELKRFEGTR--VTVESFLAWRKQFE 610
+L QE+ N T K++++REER ++ ADEEA+ RFE + V S + R +FE
Sbjct: 341 SLNQQNQEFEN-TMKKLREKREER---RRLADEEAKQSRFEFQQRIVAFHSCVLLRIRFE 396
>Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical
protein C14B1.6 protein.
Length = 793
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = +2
Query: 458 EWLN-----ETWDKVKKEREERI-LAKQKADEEAELKRFEGTRVTVESFLAWRKQFEID 616
+WLN E ++ ++ER+ER L K+K +E K+ R+ E + KQF+ID
Sbjct: 4 DWLNAIPDSEDSEEDEEERQERARLLKEKEEEREACKKRYLERIEREEAQRFGKQFKID 62
>Z81546-7|CAB04452.1| 320|Caenorhabditis elegans Hypothetical
protein F53A2.4 protein.
Length = 320
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +2
Query: 482 KVKKEREERILAK----QKADEEAELKRFEGTRVTVESFLAWRKQ 604
K +KE +ER LA+ QKA EE E + + VT E A+ K+
Sbjct: 71 KKRKEEQERKLAERRAAQKAKEEEEFRNAKVVEVTDEEAAAFEKE 115
>AF292048-1|AAG41144.1| 133|Caenorhabditis elegans 3A339 protein.
Length = 133
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 497 REERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEID 616
+EE +++ K EE +LK E +E+F WRK+ ++
Sbjct: 69 KEEEFMSQMKEREEVKLKDLE---TKLENFEKWRKEIRLE 105
>AF164431-1|AAF82633.1| 320|Caenorhabditis elegans NUD-1 protein.
Length = 320
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +2
Query: 482 KVKKEREERILAK----QKADEEAELKRFEGTRVTVESFLAWRKQ 604
K +KE +ER LA+ QKA EE E + + VT E A+ K+
Sbjct: 71 KKRKEEQERKLAERRAAQKAKEEEEFRNAKVVEVTDEEAAAFEKE 115
>AF099913-14|AAC68745.1| 133|Caenorhabditis elegans Hypothetical
protein C29F9.2 protein.
Length = 133
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 497 REERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEID 616
+EE +++ K EE +LK E +E+F WRK+ ++
Sbjct: 69 KEEEFMSQMKEREEVKLKDLE---TKLENFEKWRKEIRLE 105
>Z99281-53|CAB16519.2| 677|Caenorhabditis elegans Hypothetical
protein Y57G11C.18 protein.
Length = 677
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +2
Query: 293 TYTSKYPDELPIIEIDNEENFDNIVDKEELLTHL 394
+Y KY + P+ + +NE+ FD++ + + HL
Sbjct: 434 SYQEKYYESPPVYKAENEQLFDDVTYHNDGINHL 467
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/67 (23%), Positives = 34/67 (50%)
Frame = +2
Query: 482 KVKKEREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEIDMGIPAKREREAKDKN 661
K KKE ER+ ++ ++ + K+ E R+ + F K+ + ++ERE +++
Sbjct: 960 KAKKEEAERLKKLEEKLKKEKEKQAEKDRIEAKKFEERMKKEQEKQEEKERKEREKREEK 1019
Query: 662 KLTGREL 682
+ RE+
Sbjct: 1020 ERKEREI 1026
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,703,141
Number of Sequences: 27780
Number of extensions: 326046
Number of successful extensions: 1092
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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