Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23f23
         (349 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2962|AAF53692.2|  417|Drosophila melanogaster CG10338-P...    31   0.40 
BT021333-1|AAX33481.1| 1390|Drosophila melanogaster RE02061p pro...    28   2.8  
AY229991-1|AAP44004.1| 1390|Drosophila melanogaster contactin pr...    28   2.8  
AY095040-1|AAM11368.1| 1036|Drosophila melanogaster LD28757p pro...    28   2.8  
AE014297-73|AAF52137.2| 1390|Drosophila melanogaster CG1084-PA p...    28   2.8  
AY051673-1|AAK93097.1|  470|Drosophila melanogaster LD22579p pro...    28   3.7  
AE014298-589|AAS72342.1|  297|Drosophila melanogaster CG33220-PA...    28   3.7  
AE014134-2638|AAF53484.1|  470|Drosophila melanogaster CG4148-PA...    28   3.7  
AE014296-1902|ABC66155.1|  158|Drosophila melanogaster CG34012-P...    27   8.6  

>AE014134-2962|AAF53692.2|  417|Drosophila melanogaster CG10338-PA
           protein.
          Length = 417

 Score = 31.1 bits (67), Expect = 0.40
 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -3

Query: 200 QELFVSKHFFQNLPEDFAGISYYFWKTKTERCRSLCG-CCTFCV 72
           Q++F+ K +  ++ ED+A  +Y  W T    C ++CG  CT  +
Sbjct: 50  QKVFLPKGYPDSVSEDYA--AYQIWDTAQAFCSTICGTLCTHAI 91


>BT021333-1|AAX33481.1| 1390|Drosophila melanogaster RE02061p
           protein.
          Length = 1390

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 205 TPKSFL*ANIFSRTFPKTLPASPI 134
           TP S   A IF+ TFPK  P +P+
Sbjct: 561 TPNSNYQALIFANTFPKVFPEAPV 584


>AY229991-1|AAP44004.1| 1390|Drosophila melanogaster contactin
           protein.
          Length = 1390

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 205 TPKSFL*ANIFSRTFPKTLPASPI 134
           TP S   A IF+ TFPK  P +P+
Sbjct: 561 TPNSNYQALIFANTFPKVFPEAPV 584


>AY095040-1|AAM11368.1| 1036|Drosophila melanogaster LD28757p
           protein.
          Length = 1036

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 205 TPKSFL*ANIFSRTFPKTLPASPI 134
           TP S   A IF+ TFPK  P +P+
Sbjct: 207 TPNSNYQALIFANTFPKVFPEAPV 230


>AE014297-73|AAF52137.2| 1390|Drosophila melanogaster CG1084-PA
           protein.
          Length = 1390

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 205 TPKSFL*ANIFSRTFPKTLPASPI 134
           TP S   A IF+ TFPK  P +P+
Sbjct: 561 TPNSNYQALIFANTFPKVFPEAPV 584


>AY051673-1|AAK93097.1|  470|Drosophila melanogaster LD22579p
           protein.
          Length = 470

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = +2

Query: 98  KICNVPFWSSRSNRRCRQSLREGSGKNVCSQKALGCSIWYLLSKNLNLHFMEQ 256
           KICN  F S  + RR +  +  G  K VC     G   +  L ++  +H  E+
Sbjct: 274 KICNETFMSFMALRRHKHDMHGGPKKYVCDHCGKGLKTFTSLVEHQLVHTEEK 326


>AE014298-589|AAS72342.1|  297|Drosophila melanogaster CG33220-PA
           protein.
          Length = 297

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +2

Query: 110 VPFWSSRSNRRCRQSLREG 166
           VPFW S + RR RQ L++G
Sbjct: 278 VPFWRSENVRRRRQRLKDG 296


>AE014134-2638|AAF53484.1|  470|Drosophila melanogaster CG4148-PA
           protein.
          Length = 470

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = +2

Query: 98  KICNVPFWSSRSNRRCRQSLREGSGKNVCSQKALGCSIWYLLSKNLNLHFMEQ 256
           KICN  F S  + RR +  +  G  K VC     G   +  L ++  +H  E+
Sbjct: 274 KICNETFMSFMALRRHKHDMHGGPKKYVCDHCGKGLKTFTSLVEHQLVHTEEK 326


>AE014296-1902|ABC66155.1|  158|Drosophila melanogaster CG34012-PA
           protein.
          Length = 158

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
 Frame = +2

Query: 68  MPHKKYNNHTKICNVPFWSSRSNR------RCRQSLREGSGKNVCSQKALGCSIWYLLSK 229
           M H    N TKI ++  W SR  +      R ++ LR G+ + +C    +   I  +L +
Sbjct: 1   MSHGNKQNFTKIWDLGKWESRDIKHYSTISRIQKQLRLGNWEYLCQHPEIRAIIRVILHQ 60

Query: 230 NLN 238
            LN
Sbjct: 61  ALN 63


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,727,940
Number of Sequences: 53049
Number of extensions: 278697
Number of successful extensions: 743
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)