Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23f21
(348 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 42 2e-04
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 41 2e-04
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 40 4e-04
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 39 9e-04
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 39 9e-04
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 39 9e-04
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 39 9e-04
X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C. el... 38 0.002
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 38 0.002
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 38 0.003
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 38 0.003
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 38 0.003
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 37 0.003
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 37 0.003
L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock pro... 36 0.011
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 34 0.032
Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical pr... 32 0.098
M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein. 32 0.13
Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical pr... 31 0.17
EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock pr... 31 0.17
U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock prot... 31 0.23
U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock prot... 31 0.23
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 31 0.23
K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock prot... 31 0.23
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 31 0.23
AF016657-13|AAB93657.1| 274|Caenorhabditis elegans Hypothetical... 31 0.30
Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical pr... 30 0.52
Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical pr... 30 0.52
L15314-2|AAF99983.1| 322|Caenorhabditis elegans Hypothetical pr... 27 2.8
K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock prot... 27 2.8
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z81074-7|CAB03042.1| 495|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z81074-6|CAE46669.1| 475|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z68748-6|CAD27621.1| 88|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 26 8.5
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 26 8.5
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 26 8.5
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 26 8.5
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 26 8.5
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 41.5 bits (93), Expect = 2e-04
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +2
Query: 218 GSSIKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEK 346
G I D+SKF + LD+ HF P+D+ +++ + +E + E+K
Sbjct: 45 GEQIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEGIQEKK 87
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 41.1 bits (92), Expect = 2e-04
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = +2
Query: 194 WRQPGLREG----SSIKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEE 343
W +P +EG S++ D +F +++D F P++I VK +D +++E HE+
Sbjct: 92 WAEPIFKEGIDVNSNVVNDDRRFAVDMDCYQFRPEEIQVKTLDDTLMIEGRHED 145
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 40.3 bits (90), Expect = 4e-04
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 218 GSSIKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEK 346
G I D+SKF + LD+ HF P+++ +K+ + +E + E K
Sbjct: 45 GEQIVNDESKFSVQLDVSHFKPENLKIKLDGRELKIEGIQETK 87
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 39.1 bits (87), Expect = 9e-04
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +2
Query: 227 IKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEK 346
I D+SKF + LD+ HF P+D+ +++ + +E + E+K
Sbjct: 39 IVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEGIQEKK 78
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 39.1 bits (87), Expect = 9e-04
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +2
Query: 227 IKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEK 346
I D+SKF + LD+ HF P+D+ +++ + +E + E+K
Sbjct: 47 IVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEGIQEKK 86
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 39.1 bits (87), Expect = 9e-04
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +2
Query: 227 IKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEK 346
I D+SKF + LD+ HF P+D+ +++ + +E + E+K
Sbjct: 47 IVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEGIQEKK 86
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 39.1 bits (87), Expect = 9e-04
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +2
Query: 227 IKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEK 346
I D+SKF + LD+ HF P+D+ +++ + +E + E+K
Sbjct: 47 IVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEGIQEKK 86
>X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C.
elegans mRNA 3'-regionfor heat shock protein hsp 16-41
(exon 2).somal genes.).
Length = 97
Score = 37.9 bits (84), Expect = 0.002
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +2
Query: 227 IKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEK 346
I D+SKF + LD+ HF P+++ +K+ + +E + E K
Sbjct: 1 IVNDESKFSVQLDVSHFKPENLKIKLDGRELKIEGIQETK 40
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 37.9 bits (84), Expect = 0.002
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +2
Query: 227 IKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEK 346
I D+SKF + LD+ HF P+++ +K+ + +E + E K
Sbjct: 47 IVNDESKFSVQLDVSHFKPENLKIKLDGRELKIEGIQETK 86
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 37.5 bits (83), Expect = 0.003
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +2
Query: 230 KKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEK 346
+ D ++ D+ ++ P+++TVK +D ++V A HEEK
Sbjct: 22 ESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEK 60
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 37.5 bits (83), Expect = 0.003
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +2
Query: 230 KKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEK 346
+ D ++ D+ ++ P+++TVK +D ++V A HEEK
Sbjct: 119 ESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEK 157
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 37.5 bits (83), Expect = 0.003
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +2
Query: 230 KKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEK 346
+ D ++ D+ ++ P+++TVK +D ++V A HEEK
Sbjct: 133 ESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEK 171
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 37.1 bits (82), Expect = 0.003
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +2
Query: 206 GLREGSSIK--KDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEK 346
G R G +I + ++ +++D+ F P+++ V IVD +++E H EK
Sbjct: 41 GHRVGDAIDVVNNDQEYNVSVDVSQFEPEELKVNIVDNQLIIEGKHNEK 89
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 37.1 bits (82), Expect = 0.003
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +2
Query: 206 GLREGSSIK--KDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEK 346
G R G +I + ++ +++D+ F P+++ V IVD +++E H EK
Sbjct: 40 GHRVGDAIDVVNNDQEYNVSVDVSQFEPEELKVNIVDNQLIIEGKHNEK 88
>L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock
protein protein 12.2 protein.
Length = 110
Score = 35.5 bits (78), Expect = 0.011
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +2
Query: 227 IKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEK 346
+ K KF++ LD+Q F+P +I VK+ +++ HE +
Sbjct: 27 VHNTKEKFEVGLDVQFFTPKEIEVKVSGQELLIHCRHETR 66
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 33.9 bits (74), Expect = 0.032
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 221 SSIKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEK 346
+SI+ + F LD+ + D + V +VD ++VE H EK
Sbjct: 72 TSIRVTNTSFHAILDVSKYDADSLKVTVVDNNIIVEGSHGEK 113
>Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical
protein T22A3.2a protein.
Length = 109
Score = 32.3 bits (70), Expect = 0.098
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +2
Query: 167 PEISRSQFSWRQPGLREGSSIK--KDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHE 340
P + S SW P +K KF++ LD F P+DI VK+ +++ H+
Sbjct: 5 PITTDSAASWDWPLQHNDGVVKVTNTSEKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHD 64
Query: 341 EK 346
+
Sbjct: 65 NR 66
>M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein.
Length = 22
Score = 31.9 bits (69), Expect = 0.13
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 227 IKKDKSKFQINLDIQHFSPDD 289
I D+SKF + LD+ HF P+D
Sbjct: 2 IVNDESKFSVQLDVSHFKPED 22
>Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical
protein T22A3.2b protein.
Length = 112
Score = 31.5 bits (68), Expect = 0.17
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +2
Query: 167 PEISRSQFSWRQPGLREGSSIK--KDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHE 340
P + S SW P +K KF++ LD F P+DI VK+ +++ H+
Sbjct: 5 PITTDSAASWDWPLQHNDGVVKVTNTSEKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHD 64
>EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock
protein 12.1 protein.
Length = 112
Score = 31.5 bits (68), Expect = 0.17
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +2
Query: 167 PEISRSQFSWRQPGLREGSSIK--KDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHE 340
P + S SW P +K KF++ LD F P+DI VK+ +++ H+
Sbjct: 5 PITTDSAASWDWPLQHNDGVVKVTNTSEKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHD 64
>U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.11 protein.
Length = 145
Score = 31.1 bits (67), Expect = 0.23
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 215 EGSSIKKDKSKFQINLDIQHFSPDDITVKIVDG 313
E S I + KF INL++ F P+D+ + + DG
Sbjct: 39 ESSEIVNNDQKFAINLNVSQFKPEDLKINL-DG 70
>U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.1 protein.
Length = 145
Score = 31.1 bits (67), Expect = 0.23
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 215 EGSSIKKDKSKFQINLDIQHFSPDDITVKIVDG 313
E S I + KF INL++ F P+D+ + + DG
Sbjct: 39 ESSEIVNNDQKFAINLNVSQFKPEDLKINL-DG 70
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 31.1 bits (67), Expect = 0.23
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 215 EGSSIKKDKSKFQINLDIQHFSPDDITVKIVDG 313
E S I + KF INL++ F P+D+ + + DG
Sbjct: 39 ESSEIVNNDQKFAINLNVSQFKPEDLKINL-DG 70
>K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock protein
16-1a protein.
Length = 145
Score = 31.1 bits (67), Expect = 0.23
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 215 EGSSIKKDKSKFQINLDIQHFSPDDITVKIVDG 313
E S I + KF INL++ F P+D+ + + DG
Sbjct: 39 ESSEIVNNDQKFAINLNVSQFKPEDLKINL-DG 70
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 31.1 bits (67), Expect = 0.23
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 215 EGSSIKKDKSKFQINLDIQHFSPDDITVKIVDG 313
E S I + KF INL++ F P+D+ + + DG
Sbjct: 39 ESSEIVNNDQKFAINLNVSQFKPEDLKINL-DG 70
>AF016657-13|AAB93657.1| 274|Caenorhabditis elegans Hypothetical
protein C16C4.12 protein.
Length = 274
Score = 30.7 bits (66), Expect = 0.30
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = -1
Query: 276 KC*MSKLIWNLDLSFLIELPSRNPGCLHENW 184
KC + W++++ F ++L S+N CL ++W
Sbjct: 48 KCEKEECEWSIEVEFTLKLVSQNGNCLMKSW 78
>Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.4 protein.
Length = 147
Score = 29.9 bits (64), Expect = 0.52
Identities = 10/44 (22%), Positives = 24/44 (54%)
Frame = +2
Query: 209 LREGSSIKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHE 340
+ + S I KF +NL++ +F P+++ V + + ++ H+
Sbjct: 39 MTDDSEIMNSNDKFAVNLNVSNFKPEELKVNLEGRQLSIQGEHD 82
>Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical
protein F43D9.4 protein.
Length = 159
Score = 29.9 bits (64), Expect = 0.52
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +2
Query: 221 SSIKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHEEK 346
+ ++ KF + LD+ F P+++ V + + +E HE K
Sbjct: 44 NEVENTAQKFCVKLDVAAFKPEELKVNLEGHVLTIEGHHEVK 85
>L15314-2|AAF99983.1| 322|Caenorhabditis elegans Hypothetical
protein K06H7.7 protein.
Length = 322
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -3
Query: 340 FVKSFHDDEAIDNFHSNVVRRKV 272
FVK+F +++ +H NV+RRK+
Sbjct: 279 FVKNFLFSKSLHLYHGNVIRRKI 301
>K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock protein
16-1 protein.
Length = 146
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 227 IKKDKSKFQINLDIQHFSPDDITVKIVDG 313
I + KF INL++ F P+D+ + + DG
Sbjct: 44 IVNNDQKFAINLNVSQFKPEDLKINL-DG 71
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 25.8 bits (54), Expect = 8.5
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3
Query: 135 CCLKNCCRCC 164
CC + CC CC
Sbjct: 95 CCCRRCCTCC 104
>Z81074-7|CAB03042.1| 495|Caenorhabditis elegans Hypothetical
protein F32B6.8b protein.
Length = 495
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 192 HGGSQDCVREVRLRRINLNSRS 257
HGG +D R RLRR+ N +S
Sbjct: 150 HGGDRDQTRFARLRRLFSNGKS 171
>Z81074-6|CAE46669.1| 475|Caenorhabditis elegans Hypothetical
protein F32B6.8a protein.
Length = 475
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 192 HGGSQDCVREVRLRRINLNSRS 257
HGG +D R RLRR+ N +S
Sbjct: 130 HGGDRDQTRFARLRRLFSNGKS 151
>Z68748-6|CAD27621.1| 88|Caenorhabditis elegans Hypothetical
protein F13H10.6 protein.
Length = 88
Score = 25.8 bits (54), Expect = 8.5
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +3
Query: 135 CCLKNCCRCC 164
CC+ +CC CC
Sbjct: 79 CCIADCCDCC 88
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 25.8 bits (54), Expect = 8.5
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3
Query: 135 CCLKNCCRCC 164
CC + CC CC
Sbjct: 93 CCCRRCCTCC 102
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 135 CCLKNCCRCCGQKYPGANFHGGSQDCVREVRLRRINLNSR 254
CC CC CC G G C R RR N R
Sbjct: 105 CCCTRCCTCCRPCCCGCGCGCGCCGCGGGGRKRRSLQNLR 144
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 25.8 bits (54), Expect = 8.5
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3
Query: 135 CCLKNCCRCC 164
CC + CC CC
Sbjct: 94 CCCRRCCTCC 103
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 135 CCLKNCCRCCGQKYPGANFHGGSQDCVREVRLRRINLNSR 254
CC CC CC G G C R RR N R
Sbjct: 106 CCCTRCCTCCRPCCCGCGCGCGCCGCGGGGRKRRSLQNLR 145
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 25.8 bits (54), Expect = 8.5
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3
Query: 135 CCLKNCCRCC 164
CC + CC CC
Sbjct: 94 CCCRRCCTCC 103
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 135 CCLKNCCRCCGQKYPGANFHGGSQDCVREVRLRRINLNSR 254
CC CC CC G G C R RR N R
Sbjct: 106 CCCTRCCTCCRPCCCGCGCGCGCCGCGGGGRKRRSLQNLR 145
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 25.8 bits (54), Expect = 8.5
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3
Query: 135 CCLKNCCRCC 164
CC + CC CC
Sbjct: 95 CCCRRCCTCC 104
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 25.8 bits (54), Expect = 8.5
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +3
Query: 129 WHCCLKNCC 155
W CC +NCC
Sbjct: 413 WSCCFRNCC 421
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,822,294
Number of Sequences: 27780
Number of extensions: 133564
Number of successful extensions: 438
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 437
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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