Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23f17
         (120 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72499-1|CAA96580.1| 1102|Homo sapiens herpesvirus associated ub...    42   5e-04
AY376241-1|AAQ82908.1| 1112|Homo sapiens ubiquitin-specific prot...    42   5e-04
CR542215-1|CAG47011.1|  116|Homo sapiens VAMP5 protein.                28   6.3  
BC017891-1|AAH17891.1|  116|Homo sapiens vesicle-associated memb...    28   6.3  
AF054825-1|AAC97473.1|  116|Homo sapiens VAMP5 protein.                28   6.3  
AC016753-4|AAY24342.1|  116|Homo sapiens unknown protein.              28   6.3  

>Z72499-1|CAA96580.1| 1102|Homo sapiens herpesvirus associated
           ubiquitin-specific  protease (HAUSP) protein.
          Length = 1102

 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +2

Query: 14  QPH-KALGVFLQCNGECSSPGWSCYGLGELXLLSYK 118
           +PH K++G FLQCN E  S  WSC+    L +++Y+
Sbjct: 109 RPHQKSVGFFLQCNAESDSTSWSCHAQAVLKIINYR 144


>AY376241-1|AAQ82908.1| 1112|Homo sapiens ubiquitin-specific
           protease 7 isoform protein.
          Length = 1112

 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +2

Query: 14  QPH-KALGVFLQCNGECSSPGWSCYGLGELXLLSYK 118
           +PH K++G FLQCN E  S  WSC+    L +++Y+
Sbjct: 119 RPHQKSVGFFLQCNAESDSTSWSCHAQAVLKIINYR 154


>CR542215-1|CAG47011.1|  116|Homo sapiens VAMP5 protein.
          Length = 116

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -2

Query: 83  NKTTQANCIRRCTEGIRLKLCV 18
           NKTTQ    ++C E IR ++CV
Sbjct: 52  NKTTQNLAQKKCWENIRYRICV 73


>BC017891-1|AAH17891.1|  116|Homo sapiens vesicle-associated
           membrane protein 5 (myobrevin) protein.
          Length = 116

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -2

Query: 83  NKTTQANCIRRCTEGIRLKLCV 18
           NKTTQ    ++C E IR ++CV
Sbjct: 52  NKTTQNLAQKKCWENIRYRICV 73


>AF054825-1|AAC97473.1|  116|Homo sapiens VAMP5 protein.
          Length = 116

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -2

Query: 83  NKTTQANCIRRCTEGIRLKLCV 18
           NKTTQ    ++C E IR ++CV
Sbjct: 52  NKTTQNLAQKKCWENIRYRICV 73


>AC016753-4|AAY24342.1|  116|Homo sapiens unknown protein.
          Length = 116

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -2

Query: 83  NKTTQANCIRRCTEGIRLKLCV 18
           NKTTQ    ++C E IR ++CV
Sbjct: 52  NKTTQNLAQKKCWENIRYRICV 73


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,487,168
Number of Sequences: 237096
Number of extensions: 255318
Number of successful extensions: 514
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 76,859,062
effective HSP length: 20
effective length of database: 72,117,142
effective search space used: 1370225698
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)