Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23f17
         (120 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical...    31   0.15 
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical...    31   0.15 
Z66512-2|CAA91323.1|  387|Caenorhabditis elegans Hypothetical pr...    28   0.80 
AL032663-3|CAA21761.1|  320|Caenorhabditis elegans Hypothetical ...    27   1.4  
L14433-1|AAA27979.1|  398|Caenorhabditis elegans Hypothetical pr...    26   4.3  
U97407-4|AAB52482.3| 1272|Caenorhabditis elegans P-glycoprotein ...    25   5.6  
EF205592-1|ABM92304.1| 1272|Caenorhabditis elegans ABC transport...    25   5.6  

>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
           protein Y57A10A.18b protein.
          Length = 1459

 Score = 30.7 bits (66), Expect = 0.15
 Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = +2

Query: 23  KALGVFLQCNGECS-SPGWSCYGLGELXLLSYK 118
           K +G FLQC  E + S  WS + + ++ ++SYK
Sbjct: 221 KCMGFFLQCAPERAYSDQWSVHAIADMRMISYK 253


>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
           protein Y57A10A.18a protein.
          Length = 1456

 Score = 30.7 bits (66), Expect = 0.15
 Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = +2

Query: 23  KALGVFLQCNGECS-SPGWSCYGLGELXLLSYK 118
           K +G FLQC  E + S  WS + + ++ ++SYK
Sbjct: 221 KCMGFFLQCAPERAYSDQWSVHAIADMRMISYK 253


>Z66512-2|CAA91323.1|  387|Caenorhabditis elegans Hypothetical
           protein F52H3.3 protein.
          Length = 387

 Score = 28.3 bits (60), Expect = 0.80
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 23  KALGVFLQCNGECSSPGWSCYGLGELXLLS 112
           K   V++ CN E  S  WSC  + E  L+S
Sbjct: 124 KFFSVYIDCNPESESTLWSCDAVVEFRLVS 153


>AL032663-3|CAA21761.1|  320|Caenorhabditis elegans Hypothetical
           protein Y75B12B.4 protein.
          Length = 320

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 23  KALGVFLQCNGECSSPGWSC 82
           K LG+ L+CN E  S  WSC
Sbjct: 52  KHLGIHLKCNEELRSNLWSC 71


>L14433-1|AAA27979.1|  398|Caenorhabditis elegans Hypothetical
           protein C50C3.7 protein.
          Length = 398

 Score = 25.8 bits (54), Expect = 4.3
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 9   ITNHTKL*AYSFSATANAVRLGGLVMDWA 95
           I +HT L A      A++  +GG V+ WA
Sbjct: 30  IDDHTHLVAIGLQEVAHSETIGGAVLTWA 58


>U97407-4|AAB52482.3| 1272|Caenorhabditis elegans P-glycoprotein
           related protein 2 protein.
          Length = 1272

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 74  TQANCIRRCTEGIRLKL 24
           T ANC+ RC E + +KL
Sbjct: 767 TSANCLGRCGESLTMKL 783


>EF205592-1|ABM92304.1| 1272|Caenorhabditis elegans ABC transporter
           PGP-2 protein.
          Length = 1272

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 74  TQANCIRRCTEGIRLKL 24
           T ANC+ RC E + +KL
Sbjct: 767 TSANCLGRCGESLTMKL 783


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,899,787
Number of Sequences: 27780
Number of extensions: 32543
Number of successful extensions: 103
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 103
length of database: 12,740,198
effective HSP length: 20
effective length of database: 12,184,598
effective search space used: 231507362
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)