Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte23f13
(667 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0058 - 3704138-3704257,3704355-3704421,3704502-3704641,370... 184 6e-47
02_05_1074 - 33904518-33904697,33904886-33904985,33905085-339053... 31 1.1
02_03_0007 - 13875735-13875826,13876217-13877465 31 1.1
06_03_1365 + 29598130-29598523,29599016-29599078,29599292-29599398 30 1.9
01_06_1591 - 38484790-38485467,38486165-38486292,38487098-38487356 30 1.9
07_03_0025 + 12587868-12588429,12591820-12592031,12592212-125926... 28 5.8
05_06_0070 + 25342965-25343882,25343968-25344618 28 5.8
04_04_1476 - 33863067-33863148,33863239-33863310,33863393-338634... 28 5.8
03_05_0944 + 29046793-29046922,29048091-29048464,29048556-290486... 28 5.8
10_05_0103 - 9186758-9187345,9187395-9187951,9188265-9188376 28 7.7
02_05_1256 - 35281926-35282635,35282711-35283112,35283508-35283814 28 7.7
01_01_0051 + 389051-389623 28 7.7
>09_02_0058 -
3704138-3704257,3704355-3704421,3704502-3704641,
3705332-3705424,3705927-3706109,3706491-3706595,
3706738-3706818,3706905-3707046,3707207-3707286,
3707456-3707568,3708051-3708297,3708659-3709051
Length = 587
Score = 184 bits (448), Expect = 6e-47
Identities = 92/137 (67%), Positives = 107/137 (78%)
Frame = +1
Query: 172 DESLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDEDEVL 351
DE LYPIA+LIDELKNED+QLRLNSI++LSTIA ALG ERT+ ELIPFL+E DEDEVL
Sbjct: 5 DEPLYPIAILIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDEDEVL 64
Query: 352 LALAEQLGSFINLVGGGEFAHCLLPPLETLAAVEETVVRDKAVASLRAVAEHHSPQALEE 531
LA+AE+LG FI VGG E AH LLPPLETL VEET VRDKAV SL + + +
Sbjct: 65 LAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGAQMKESDIVD 124
Query: 532 HFVPLVQRLAGGDWFTS 582
FVP+V+RLA G+WFT+
Sbjct: 125 WFVPVVKRLAAGEWFTA 141
Score = 49.6 bits (113), Expect = 2e-06
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Frame = +1
Query: 169 TDESLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDED-E 345
T E L PI + + LK+E +RLN I KL + +G++ L+P + E D
Sbjct: 355 TIEQLLPIFLSL--LKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWR 412
Query: 346 VLLALAEQLGSFINLVGGGEFAHCLLPPLETLAAVEETVVRDKAVASLRAVAEHHSPQAL 525
V LA+ E + + +G G F L + +RD A +L+ +AE P+
Sbjct: 413 VRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLEDKVFSIRDAAANNLKRLAEEFGPEWA 472
Query: 526 EEHFVPLV 549
+H +P V
Sbjct: 473 MQHIIPQV 480
Score = 34.3 bits (75), Expect = 0.088
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 2/123 (1%)
Frame = +1
Query: 199 LIDELKNEDVQ-LRLNSIKKLSTIALALGVERTKSELIPFLTETIYDED-EVLLALAEQL 372
+ D+L +D +RL +++ + + L + + ++P + D+ V +A QL
Sbjct: 206 IFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMVANQL 265
Query: 373 GSFINLVGGGEFAHCLLPPLETLAAVEETVVRDKAVASLRAVAEHHSPQALEEHFVPLVQ 552
VG L+P L E VR A + SPQ +H +P V+
Sbjct: 266 YELCEAVGPEHSREQLVPAYVRLLRDNEAEVRIAAAGKVTKFCRILSPQLAIQHILPCVK 325
Query: 553 RLA 561
L+
Sbjct: 326 ELS 328
Score = 32.3 bits (70), Expect = 0.36
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 582 RTSACGLFSVCYPRVSAPVKAELR 653
R S+CGLF + YP +KAELR
Sbjct: 142 RVSSCGLFHIAYPSAPDQLKAELR 165
>02_05_1074 -
33904518-33904697,33904886-33904985,33905085-33905311,
33905511-33908384,33908467-33908643,33908786-33909008,
33909727-33909806,33910657-33910817,33910892-33910937,
33911129-33911251,33911730-33911804,33911920-33912120
Length = 1488
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +1
Query: 169 TDESLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDEDEV 348
T++ L PI L + D QLR ++ + +G + L+P+L + + DE EV
Sbjct: 742 TNDFLLPILPAF--LNDRDEQLRAVYFGQIVVVCYFIGSRSVEEYLLPYLEQALSDEMEV 799
Query: 349 LL 354
+L
Sbjct: 800 VL 801
Score = 28.7 bits (61), Expect = 4.4
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 1/106 (0%)
Frame = +1
Query: 175 ESLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDEDEVLL 354
+S+Y I + + + +R ++ + + G +T L+P L + D DE L
Sbjct: 703 KSIYEIVQELVMGQKQTPNVRRALLQDIGYLCYFFGHRQTNDFLLPILPAFLNDRDEQLR 762
Query: 355 AL-AEQLGSFINLVGGGEFAHCLLPPLETLAAVEETVVRDKAVASL 489
A+ Q+ +G LLP LE + E VV K + L
Sbjct: 763 AVYFGQIVVVCYFIGSRSVEEYLLPYLEQALSDEMEVVLVKVLDCL 808
>02_03_0007 - 13875735-13875826,13876217-13877465
Length = 446
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +1
Query: 343 EVLLALAEQLGSFINLVGGGEFAHCLLPPLETLAAVEETVVRDKAVASLRAVAEHHSPQA 522
E+LL +L S +GG EF+ +P A+ ++ ++ + AV H SP+A
Sbjct: 219 ELLLINTPRLDSLKITLGGNEFS---VPFSRARIALTNPLLEIESAKEITAVPPHESPKA 275
Query: 523 LEEHFVP 543
L E VP
Sbjct: 276 LLEDEVP 282
>06_03_1365 + 29598130-29598523,29599016-29599078,29599292-29599398
Length = 187
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -3
Query: 560 ARRCTSGTKCSSSACGLWCSATARSEATALSRTTVSSTAA-NVSRGGRRQCANSP 399
A+RC G +SAC S++A + A A T STAA + S G A P
Sbjct: 104 AKRC--GVTTDASACAKSASSSATAAAAAAGAGTAGSTAASSASTGNAASTAAKP 156
>01_06_1591 - 38484790-38485467,38486165-38486292,38487098-38487356
Length = 354
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/66 (25%), Positives = 26/66 (39%)
Frame = -3
Query: 593 SRCSEVNQSPPARRCTSGTKCSSSACGLWCSATARSEATALSRTTVSSTAANVSRGGRRQ 414
S C ++PP ++ G WCS R A + VS++ S+GGR +
Sbjct: 11 SSCLPARRTPPPLAAAGEAGSLAAGPGRWCSWRRRQPAERWPKLAVSASGRK-SKGGRDE 69
Query: 413 CANSPP 396
P
Sbjct: 70 GGGDEP 75
>07_03_0025 +
12587868-12588429,12591820-12592031,12592212-12592603,
12592608-12592965
Length = 507
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +1
Query: 343 EVLLALAEQLGSFINLVGGGEFAHCLLPPLETLAAVEETVVRDKAVASLRAVAEHHSPQA 522
E LL +LGS +G EF+ +P + +++ ++ + AV H SP+A
Sbjct: 115 EQLLINTPRLGSLKITLGENEFS---IPFSRARITLTDSLPEIESAEEVTAVPPHESPEA 171
Query: 523 LEEHFVP 543
L E VP
Sbjct: 172 LLEDEVP 178
>05_06_0070 + 25342965-25343882,25343968-25344618
Length = 522
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +1
Query: 334 DEDEVLLALAEQLGSFINLVGGGEFAHCLLPPLETL---AAVEETVVRDKAVAS 486
DED V + EQLG L + A L PP+ L A+E+TV+ VA+
Sbjct: 353 DEDTVAVVREEQLGKMTLLRAAMKEAMRLHPPVPLLIPREAIEDTVLHGHRVAA 406
>04_04_1476 -
33863067-33863148,33863239-33863310,33863393-33863472,
33863549-33863611,33863837-33863924,33864277-33864339,
33864421-33864494,33864683-33864732,33866126-33866295,
33867041-33867120
Length = 273
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 336 IIDCLSEERDQLRFSPL-HAQSQRDRRQLLYRVQT 235
I+DCLS+ D SP+ H + R+ L+Y V T
Sbjct: 101 ILDCLSKSSDSDHSSPVEHLSCRSSRKTLIYLVLT 135
>03_05_0944 + 29046793-29046922,29048091-29048464,29048556-29048687,
29048829-29049210,29049370-29049513,29049593-29049777,
29049925-29050051,29050603-29050676,29051071-29051147,
29051256-29051292,29051453-29051619,29051800-29051983,
29052053-29052130,29052451-29052570,29052648-29052707,
29053057-29053179,29053848-29053941,29054019-29054197,
29054737-29055039,29055373-29055474,29055553-29055693,
29055831-29055995,29056168-29056344,29056432-29056554,
29057787-29057867,29057983-29058099,29058214-29058386,
29058846-29058923,29058994-29059141,29059755-29059877,
29060015-29060071,29060145-29060255,29060382-29060573,
29060690-29060863,29061263-29061373,29061462-29061531,
29061734-29061812,29061898-29062000,29062086-29062256,
29062348-29062470,29062548-29062661,29062935-29063041,
29063117-29063168,29063245-29063351,29063589-29063703,
29063819-29063929,29064016-29064153,29064230-29064352,
29064535-29064606,29064774-29064886,29066780-29067110,
29067199-29067381,29068669-29068863,29068943-29069110,
29069208-29069340,29069511-29069595,29069726-29069765
Length = 2591
Score = 28.3 bits (60), Expect = 5.8
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 6/126 (4%)
Frame = +1
Query: 166 GTDESLYPIAV--LIDELKNEDVQL-RLNSIKKLSTIALALGVERTKSELIPFLTETIYD 336
G E ++P V L+D LK++ + R + + LS + ALG + +++P +
Sbjct: 1609 GMGEEIFPDLVPWLLDTLKSDSSNVERSGAAQGLSEVLAALGKDYF-DQILPDIIRNCSH 1667
Query: 337 EDEVLLALAEQLGSFINLVGGGEFAHCL---LPPLETLAAVEETVVRDKAVASLRAVAEH 507
+ + L ++ GG F + L LP + A E VRD A+++ EH
Sbjct: 1668 QKASVRDGHLTLFRYLPRSLGGVFQNYLQIVLPAILDGLADENESVRDAALSAGHVFVEH 1727
Query: 508 HSPQAL 525
++ +L
Sbjct: 1728 YATSSL 1733
>10_05_0103 - 9186758-9187345,9187395-9187951,9188265-9188376
Length = 418
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +1
Query: 343 EVLLALAEQLGSFINLVGGGEFAHCLLPPLETLAAVEETVVRDKAVASLRAVAEHHSPQA 522
E L+ + GS ++G EF+ +P + + + ++V + AV H SP+A
Sbjct: 306 EQLIINTPRFGSLKIILGENEFS---IPFSRARITLTDPLPEIESVEEVTAVPPHESPEA 362
Query: 523 LEEHFVP 543
L E VP
Sbjct: 363 LLEDEVP 369
>02_05_1256 - 35281926-35282635,35282711-35283112,35283508-35283814
Length = 472
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -3
Query: 515 GLWCSATARSEATALSRTTVSSTAANVSRGGRRQ 414
GLW S+ + S +++ S S++ +N R RR+
Sbjct: 60 GLWFSSLSTSSSSSSSAAATSASGSNAKRRSRRE 93
>01_01_0051 + 389051-389623
Length = 190
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = -3
Query: 557 RRCTSGTKCSSSACGLWCSATARSEATALSRTTVSSTAANVSRGG---RRQCANSPPPTK 387
+R + GT SSS+ S+++ SE+++ S ++ S ++++ S RRQ N PP +
Sbjct: 92 QRSSHGTDTSSSSESSSSSSSSSSESSSSSSSSSSESSSSSSDDDLARRRQQRNPSPPPQ 151
Query: 386 LMK 378
K
Sbjct: 152 YKK 154
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,517,948
Number of Sequences: 37544
Number of extensions: 315737
Number of successful extensions: 1157
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1154
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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