Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23f11
         (687 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016670-6|AAB66103.2|  839|Caenorhabditis elegans Hypothetical ...    30   1.3  
Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical p...    28   5.4  
Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical p...    28   5.4  

>AF016670-6|AAB66103.2|  839|Caenorhabditis elegans Hypothetical
           protein K02F6.3 protein.
          Length = 839

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 217 SFPSVEAPSNFSTVSNSLRKIFEISLK 297
           SFP+ + PS+  T SNSL   FE+  K
Sbjct: 150 SFPAEDIPSSIETYSNSLNVFFELEWK 176


>Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6a protein.
          Length = 1067

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -2

Query: 512 KKKPFEYCFVTFFHW 468
           K KPFE CF+ FFH+
Sbjct: 939 KIKPFERCFMKFFHY 953


>Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6b protein.
          Length = 1067

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -2

Query: 512 KKKPFEYCFVTFFHW 468
           K KPFE CF+ FFH+
Sbjct: 939 KIKPFERCFMKFFHY 953


>Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6a protein.
          Length = 1067

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -2

Query: 512 KKKPFEYCFVTFFHW 468
           K KPFE CF+ FFH+
Sbjct: 939 KIKPFERCFMKFFHY 953


>Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6b protein.
          Length = 1067

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -2

Query: 512 KKKPFEYCFVTFFHW 468
           K KPFE CF+ FFH+
Sbjct: 939 KIKPFERCFMKFFHY 953


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,872,171
Number of Sequences: 27780
Number of extensions: 243674
Number of successful extensions: 513
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)