Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23f09
         (577 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY954523-1|AAX34431.1|  729|Caenorhabditis elegans anion transpo...    28   4.1  
AY887907-1|AAX34419.1|  729|Caenorhabditis elegans anion transpo...    28   4.1  
AC006625-1|AAK68277.2|  729|Caenorhabditis elegans Sulfate perme...    28   4.1  
Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.      28   5.5  
U28944-9|AAL02438.1|  122|Caenorhabditis elegans Hypothetical pr...    28   5.5  
U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein...    28   5.5  
U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein...    28   5.5  
AF047660-1|AAC04431.1|  900|Caenorhabditis elegans Osm-9 and cap...    28   5.5  
AF040645-8|AAB94982.1|  292|Caenorhabditis elegans Hypothetical ...    28   5.5  

>AY954523-1|AAX34431.1|  729|Caenorhabditis elegans anion
           transporter SULP-1b protein.
          Length = 729

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = -1

Query: 328 VLFTTIFAFSRQPSASSQCSLIVDLT--SLGVLVYISLNTEITDNVFLIVASSLYVPRNL 155
           +L  T+  F  QP  +SQ S  +DL+   +G+    S NT +      I A + ++    
Sbjct: 286 LLTVTLIIFFFQPDVASQASSRIDLSIPKIGLWTLPSFNTFLDSFAISIYAMTSHMQITK 345

Query: 154 TINAK*TIKVSRK 116
           +I  +   KV RK
Sbjct: 346 SIAEEKMYKVHRK 358


>AY887907-1|AAX34419.1|  729|Caenorhabditis elegans anion
           transporter SULP-1a protein.
          Length = 729

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = -1

Query: 328 VLFTTIFAFSRQPSASSQCSLIVDLT--SLGVLVYISLNTEITDNVFLIVASSLYVPRNL 155
           +L  T+  F  QP  +SQ S  +DL+   +G+    S NT +      I A + ++    
Sbjct: 286 LLTVTLIIFFFQPDVASQASSRIDLSIPKIGLWTLPSFNTFLDSFAISIYAMTSHMQITK 345

Query: 154 TINAK*TIKVSRK 116
           +I  +   KV RK
Sbjct: 346 SIAEEKMYKVHRK 358


>AC006625-1|AAK68277.2|  729|Caenorhabditis elegans Sulfate permease
           family protein 1 protein.
          Length = 729

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = -1

Query: 328 VLFTTIFAFSRQPSASSQCSLIVDLT--SLGVLVYISLNTEITDNVFLIVASSLYVPRNL 155
           +L  T+  F  QP  +SQ S  +DL+   +G+    S NT +      I A + ++    
Sbjct: 286 LLTVTLIIFFFQPDVASQASSRIDLSIPKIGLWTLPSFNTFLDSFAISIYAMTSHMQITK 345

Query: 154 TINAK*TIKVSRK 116
           +I  +   KV RK
Sbjct: 346 SIAEEKMYKVHRK 358


>Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical
           protein ZK662.4 protein.
          Length = 1440

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +3

Query: 378 IKQELLEQPTGE--LWQAIRVELKEDAKTKDQDLAAIREWLKKQPHLPDDWENGAADDIP 551
           + Q+ ++ P  +    QA+   + E    K+ +  A+ E +K +P   DD+ + + D +P
Sbjct: 697 VPQQFIKAPAPKPITLQAVVCSIPEKEIKKETEDVALLEKIKDEPLDEDDFNHPSTDPVP 756

Query: 552 TR 557
            R
Sbjct: 757 NR 758


>Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical
           protein ZK662.4 protein.
          Length = 1440

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +3

Query: 378 IKQELLEQPTGE--LWQAIRVELKEDAKTKDQDLAAIREWLKKQPHLPDDWENGAADDIP 551
           + Q+ ++ P  +    QA+   + E    K+ +  A+ E +K +P   DD+ + + D +P
Sbjct: 697 VPQQFIKAPAPKPITLQAVVCSIPEKEIKKETEDVALLEKIKDEPLDEDDFNHPSTDPVP 756

Query: 552 TR 557
            R
Sbjct: 757 NR 758


>Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.
          Length = 1440

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +3

Query: 378 IKQELLEQPTGE--LWQAIRVELKEDAKTKDQDLAAIREWLKKQPHLPDDWENGAADDIP 551
           + Q+ ++ P  +    QA+   + E    K+ +  A+ E +K +P   DD+ + + D +P
Sbjct: 697 VPQQFIKAPAPKPITLQAVVCSIPEKEIKKETEDVALLEKIKDEPLDEDDFNHPSTDPVP 756

Query: 552 TR 557
            R
Sbjct: 757 NR 758


>U28944-9|AAL02438.1|  122|Caenorhabditis elegans Hypothetical
           protein C18A3.9 protein.
          Length = 122

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 421 CQSSPVGCSKSSCLIFISKFNVFEYYSYL 335
           CQ S   CS    +I ++ F VF YY +L
Sbjct: 67  CQPSSHWCSIRCAIIIVNNFFVFMYYIFL 95


>U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein
           protein.
          Length = 1440

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +3

Query: 378 IKQELLEQPTGE--LWQAIRVELKEDAKTKDQDLAAIREWLKKQPHLPDDWENGAADDIP 551
           + Q+ ++ P  +    QA+   + E    K+ +  A+ E +K +P   DD+ + + D +P
Sbjct: 697 VPQQFIKAPAPKPITLQAVVCSIPEKEIKKETEDVALLEKIKDEPLDEDDFNHPSTDPVP 756

Query: 552 TR 557
            R
Sbjct: 757 NR 758


>U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein
           protein.
          Length = 1440

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +3

Query: 378 IKQELLEQPTGE--LWQAIRVELKEDAKTKDQDLAAIREWLKKQPHLPDDWENGAADDIP 551
           + Q+ ++ P  +    QA+   + E    K+ +  A+ E +K +P   DD+ + + D +P
Sbjct: 697 VPQQFIKAPAPKPITLQAVVCSIPEKEIKKETEDVALLEKIKDEPLDEDDFNHPSTDPVP 756

Query: 552 TR 557
            R
Sbjct: 757 NR 758


>AF047660-1|AAC04431.1|  900|Caenorhabditis elegans Osm-9 and
           capsaicin receptor-relatedprotein 2 protein.
          Length = 900

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 433 TRIACQSSPVGCSKSSCLIFISKFNVFEYYSYLCHVL 323
           TR+AC  SPV     + LI ++      +Y Y C V+
Sbjct: 575 TRLACDLSPVLLVVDNVLITVTMIFTTVHYLYYCRVI 611


>AF040645-8|AAB94982.1|  292|Caenorhabditis elegans Hypothetical
           protein F52C6.4 protein.
          Length = 292

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = -1

Query: 379 IFISKFNVFEYYSYLCHVLFTTIFAFSRQPSASSQCSLIVDLTSLGVLVYISLNTEIT 206
           IF+ +F   +++  L H+ F   F F+R  S   +  + VD  ++ + V  S    IT
Sbjct: 17  IFVLRF--IDFFETLAHIYFAIFFLFNRISSKLPEDQISVDSKTMLLSVKTSTGKTIT 72


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,246,824
Number of Sequences: 27780
Number of extensions: 239225
Number of successful extensions: 639
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)