Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23f08
         (611 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69384-2|CAD89746.1|  521|Caenorhabditis elegans Hypothetical pr...    31   0.65 
Z69384-1|CAA93416.1|  520|Caenorhabditis elegans Hypothetical pr...    31   0.65 
AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical ...    30   1.5  

>Z69384-2|CAD89746.1|  521|Caenorhabditis elegans Hypothetical
           protein T11G6.1b protein.
          Length = 521

 Score = 31.1 bits (67), Expect = 0.65
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 134 YCSKSEVNLVADRKIFKPNIREMAIKTSLAVKDDP 238
           Y + ++ NLV DRK     +R   IKT +A+K +P
Sbjct: 428 YVASAQKNLVRDRKKLVKMLRSAGIKTEMALKANP 462


>Z69384-1|CAA93416.1|  520|Caenorhabditis elegans Hypothetical
           protein T11G6.1a protein.
          Length = 520

 Score = 31.1 bits (67), Expect = 0.65
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 134 YCSKSEVNLVADRKIFKPNIREMAIKTSLAVKDDP 238
           Y + ++ NLV DRK     +R   IKT +A+K +P
Sbjct: 427 YVASAQKNLVRDRKKLVKMLRSAGIKTEMALKANP 461


>AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical
           protein F52C12.4 protein.
          Length = 1635

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -1

Query: 377 DTAIYKNRNVSSISNVYFYNL*SRSLFSLTDW-NFPL*NYPTNIEKLMGHL*QPTTF 210
           D   YKN ++  IS   F+N   R LF L    + P  ++P  IE+ + HL    +F
Sbjct: 343 DILFYKNVSICLISRFPFFNSFKRFLFFLHRMSSTPSCSHPVPIERYISHLMYEVSF 399


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,667,641
Number of Sequences: 27780
Number of extensions: 205457
Number of successful extensions: 442
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 440
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)