Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23f04
         (629 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004480-1|AAO42644.1|  787|Drosophila melanogaster LD47550p pro...    29   5.2  
AE013599-943|AAF58888.1|  787|Drosophila melanogaster CG1671-PA ...    29   5.2  
BT023791-1|AAZ41800.1|  948|Drosophila melanogaster GH14566p pro...    28   9.1  
AY102670-1|AAM27499.1|  688|Drosophila melanogaster GM14040p pro...    28   9.1  
AJ556816-1|CAD89221.1|  949|Drosophila melanogaster SMG6 protein...    28   9.1  
AE014297-3688|AAF56380.2|  948|Drosophila melanogaster CG6369-PA...    28   9.1  

>BT004480-1|AAO42644.1|  787|Drosophila melanogaster LD47550p
           protein.
          Length = 787

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = -2

Query: 346 TWGGVLRSVLDWIWKSNSFPVDQ*YLSQPVLCTQRTETVLRFLSIK 209
           T  GVLR     +W     PVDQ  L+    CT R  ++  F  IK
Sbjct: 511 TLQGVLRGHTRGVWSVRFSPVDQIVLTSSSDCTLRIWSISNFSCIK 556


>AE013599-943|AAF58888.1|  787|Drosophila melanogaster CG1671-PA
           protein.
          Length = 787

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = -2

Query: 346 TWGGVLRSVLDWIWKSNSFPVDQ*YLSQPVLCTQRTETVLRFLSIK 209
           T  GVLR     +W     PVDQ  L+    CT R  ++  F  IK
Sbjct: 511 TLQGVLRGHTRGVWSVRFSPVDQIVLTSSSDCTLRIWSISNFSCIK 556


>BT023791-1|AAZ41800.1|  948|Drosophila melanogaster GH14566p
           protein.
          Length = 948

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -2

Query: 256 LCTQRTETVLRFLSIKIYFMKIVRQDLLFPHSNPSSEFLQCCSCLKHPAAKLKK 95
           +CT + E +L+F+  KIY    VR   L P +N    F+ C    +  + + K+
Sbjct: 749 ICTSKLEDILKFVDTKIYIE--VRPRYLLPDTNC---FIDCLEDFEKLSTEFKR 797


>AY102670-1|AAM27499.1|  688|Drosophila melanogaster GM14040p
           protein.
          Length = 688

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -2

Query: 256 LCTQRTETVLRFLSIKIYFMKIVRQDLLFPHSNPSSEFLQCCSCLKHPAAKLKK 95
           +CT + E +L+F+  KIY    VR   L P +N    F+ C    +  + + K+
Sbjct: 489 ICTSKLEDILKFVDTKIYIE--VRPRYLLPDTNC---FIDCLEDFEKLSTEFKR 537


>AJ556816-1|CAD89221.1|  949|Drosophila melanogaster SMG6 protein
           protein.
          Length = 949

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -2

Query: 256 LCTQRTETVLRFLSIKIYFMKIVRQDLLFPHSNPSSEFLQCCSCLKHPAAKLKK 95
           +CT + E +L+F+  KIY    VR   L P +N    F+ C    +  + + K+
Sbjct: 749 ICTSKLEDILKFVDTKIYIE--VRPRYLLPDTNC---FIDCLEDFEKLSTEFKR 797


>AE014297-3688|AAF56380.2|  948|Drosophila melanogaster CG6369-PA
           protein.
          Length = 948

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -2

Query: 256 LCTQRTETVLRFLSIKIYFMKIVRQDLLFPHSNPSSEFLQCCSCLKHPAAKLKK 95
           +CT + E +L+F+  KIY    VR   L P +N    F+ C    +  + + K+
Sbjct: 749 ICTSKLEDILKFVDTKIYIE--VRPRYLLPDTNC---FIDCLEDFEKLSTEFKR 797


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,373,048
Number of Sequences: 53049
Number of extensions: 522743
Number of successful extensions: 1327
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1327
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)