Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23f02
         (649 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    27   0.10 
AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    25   0.71 
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    25   0.71 
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    25   0.71 
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   3.8  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   5.0  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   6.6  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 27.5 bits (58), Expect = 0.10
 Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = -3

Query: 278  YFPIRHTSPLSDFRSLWYFIADRTNFLHVTSSDLF--CPLAQPSITVLKYSTSSFLLILL 105
            +FPI +TS  S  + +W  +   +    + ++D+F  C +   +I  ++     F L+  
Sbjct: 976  FFPIDYTSAFSSEKIVWLHLVYISFLGIICAADVFYICHVCYATIQEVRAKIYFFYLVKF 1035

Query: 104  IKASRS 87
             K S+S
Sbjct: 1036 YKVSKS 1041


>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 409 LLLKISSRMYVHTRTIRPIEQLQFRCLLDP 320
           L+LK+     +   T+ P++ + FRC L P
Sbjct: 40  LILKVLVDQVMILETMTPLDFMDFRCYLRP 69


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 409 LLLKISSRMYVHTRTIRPIEQLQFRCLLDP 320
           L+LK+     +   T+ P++ + FRC L P
Sbjct: 100 LILKVLVDQVMILETMTPLDFMDFRCYLRP 129



 Score = 21.4 bits (43), Expect = 6.6
 Identities = 5/14 (35%), Positives = 12/14 (85%)
 Frame = -2

Query: 84  IFENLFKIQFHECV 43
           ++E++FK++ HE +
Sbjct: 244 VYESIFKVEVHEAL 257


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 409 LLLKISSRMYVHTRTIRPIEQLQFRCLLDP 320
           L+LK+     +   T+ P++ + FRC L P
Sbjct: 100 LILKVLVDQVMILETMTPLDFMDFRCYLRP 129



 Score = 21.4 bits (43), Expect = 6.6
 Identities = 5/14 (35%), Positives = 12/14 (85%)
 Frame = -2

Query: 84  IFENLFKIQFHECV 43
           ++E++FK++ HE +
Sbjct: 244 VYESIFKVEVHEAL 257


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 212 CQR*STTTIGNLTTVMYVLWENITIFCI*L*NWPLIGV 325
           CQ  ST  IGN+  +M+  +E   +    + N  L GV
Sbjct: 272 CQNVSTEVIGNILRLMHRRFEITALRLFTIDNKLLFGV 309


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 46  AFMELYFEEVFENLDRDALISR 111
           AFM+  +   F NLD+DA I R
Sbjct: 322 AFMDRLY---FSNLDKDAFIHR 340


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 5/14 (35%), Positives = 12/14 (85%)
 Frame = -2

Query: 84  IFENLFKIQFHECV 43
           ++E++FK++ HE +
Sbjct: 84  VYESIFKVEVHEAL 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,007
Number of Sequences: 336
Number of extensions: 3444
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)