Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23f02
         (649 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U46671-1|AAA85747.1|  364|Caenorhabditis elegans Hypothetical pr...    32   0.40 
U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division c...    29   2.1  
AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14 phosph...    29   2.1  
AF039718-6|AAB96743.1|  249|Caenorhabditis elegans Hypothetical ...    29   2.1  
Z92806-4|CAB07259.1|  727|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AF016676-9|AAG24107.1|  394|Caenorhabditis elegans Hypothetical ...    29   2.8  
AF078781-4|AAC26918.1|  255|Caenorhabditis elegans Hypothetical ...    29   3.8  
Z75548-1|CAA99911.1|  776|Caenorhabditis elegans Hypothetical pr...    28   6.6  
U28409-3|AAN60500.1|  327|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AL021504-1|CAA16428.3|  325|Caenorhabditis elegans Hypothetical ...    28   6.6  
AC025726-5|AAY55897.1|  141|Caenorhabditis elegans Hypothetical ...    27   8.7  

>U46671-1|AAA85747.1|  364|Caenorhabditis elegans Hypothetical
           protein C14E2.2 protein.
          Length = 364

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 25/105 (23%), Positives = 40/105 (38%)
 Frame = +1

Query: 112 IKRKELVEYFNTVIDGCAKGQNKSDDVTCKKFVLSAIKYHNDRKSDNGDVCLMGKYHNLL 291
           IKRK L  +F+    GCA G   +D    + FV   I+    +           +  NL 
Sbjct: 161 IKRKRLFPFFDISYQGCASGDPAADSWAIRHFVSDGIELFVAQSFAKNLFFTNPRLGNLT 220

Query: 292 YIAIKLAFDWGLKDNGTVAALLDELYACERTFERIFLGAIFGTSA 426
            +    A   G+K   ++A  ++  Y     F    +  +  TSA
Sbjct: 221 VVVNNAAVIPGIKSQMSLAIRINAFY--PTAFGATIVHKVLSTSA 263


>U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division
           cycle related protein14, isoform b protein.
          Length = 1063

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 21/72 (29%), Positives = 36/72 (50%)
 Frame = -1

Query: 526 PNRRSLHDLRRKLKRECFLPCSRNPISIQPKNTVLRCQKLLLKISSRMYVHTRTIRPIEQ 347
           P RR +   R+ + +E  +P +    S  P+      +KL +KIS R+    RTI+PI  
Sbjct: 711 PKRRFVLVSRKIVSKE--VPSAGPTCSNDPRLNYASTRKLPIKISHRLCQICRTIKPIAD 768

Query: 346 LQFRCLLDPNQR 311
           +    + D N++
Sbjct: 769 ISM--MTDENEK 778


>AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14
           phosphatase isoform B protein.
          Length = 1063

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 21/72 (29%), Positives = 36/72 (50%)
 Frame = -1

Query: 526 PNRRSLHDLRRKLKRECFLPCSRNPISIQPKNTVLRCQKLLLKISSRMYVHTRTIRPIEQ 347
           P RR +   R+ + +E  +P +    S  P+      +KL +KIS R+    RTI+PI  
Sbjct: 711 PKRRFVLVSRKIVSKE--VPSAGPTCSNDPRLNYASTRKLPIKISHRLCQICRTIKPIAD 768

Query: 346 LQFRCLLDPNQR 311
           +    + D N++
Sbjct: 769 ISM--MTDENEK 778


>AF039718-6|AAB96743.1|  249|Caenorhabditis elegans Hypothetical
           protein T12F5.1 protein.
          Length = 249

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 464 FEKSDFHPAKKYGAEVPKIAPKNILSNVRS 375
           FE  DF P K Y A   K A K+ L+ ++S
Sbjct: 122 FEFDDFSPVKSYSASTSKSAVKSTLTPIKS 151


>Z92806-4|CAB07259.1|  727|Caenorhabditis elegans Hypothetical
           protein K10G4.4 protein.
          Length = 727

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
 Frame = -3

Query: 215 DRTNFLHVTSSDLFCPLAQPSITVLKYSTSSFLLILLIKASRS-----KFSKTSSKYNSM 51
           DR   + +++SD   P++QP    LKYS S+  L+  I+AS++     K  +   + N  
Sbjct: 542 DRIWCIPISNSDNCHPISQPISNTLKYSISN-TLVKKIEASKNWSLKVKIDEGQVQINFT 600

Query: 50  NASICSRFIIFVIH 9
           ++S+ ++ I +  H
Sbjct: 601 HSSVPTKTICYKNH 614


>AF016676-9|AAG24107.1|  394|Caenorhabditis elegans Hypothetical
           protein F41B5.10 protein.
          Length = 394

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 25/110 (22%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
 Frame = +1

Query: 10  WITKI--INLLQMDAFMELY--FEEVFENLDRDALISRIKRKELVEYFNTVIDG---CAK 168
           W+T     N+L +D  +++     +V+   ++ A  + ++RK+L+E+ N  + G   C  
Sbjct: 194 WLTNFNEFNVLPLDVQLKIVKTIWQVYGRFEKIAKTAELRRKKLIEHDNVFMVGDEACLN 253

Query: 169 GQNKSDDVT-CKKFVLSAIKYHNDRKSDNGDVCLMGKYHNLLYIAIKLAF 315
            +N   DV+    +    I Y  D   D+  + ++ ++  L    I+L F
Sbjct: 254 SKNVEMDVSWYTDYSFEQIAYFMDCFHDDIYLQIVKEFETLNPTPIELNF 303


>AF078781-4|AAC26918.1|  255|Caenorhabditis elegans Hypothetical
           protein B0545.4 protein.
          Length = 255

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
 Frame = -1

Query: 424 LRCQKLLLKISSRMYVHTRTIR----PIEQLQFRCLLDPNQRPIL*LYTEDCDIFP*DI 260
           + C+K LLK  S + V T+ +R    PI Q  F  +LDP  + +L     D D  P +I
Sbjct: 1   MSCKKHLLKYFSPIRVRTQALRLPDKPIYQGCFSTILDPRWKVLL---KNDVDTIPCEI 56


>Z75548-1|CAA99911.1|  776|Caenorhabditis elegans Hypothetical
           protein R90.1 protein.
          Length = 776

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -1

Query: 556 SDTFYYLLCIPNRRSLHDLRRKLKRECFLPCSRNPISIQPKNTV 425
           +D F YL+     ++L DLRR+  ++CF   +   + IQ  N +
Sbjct: 86  NDKFNYLVMSLQGKNLADLRREAPKQCFNLSTAVRVGIQILNGI 129


>U28409-3|AAN60500.1|  327|Caenorhabditis elegans Hypothetical
           protein T25D10.1 protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +1

Query: 385 FERIFLGAIFGTSAPYFLAGWKSDFSNREENIHALVFFLD 504
           F RI+   +F T  PY   GW   +  +++N H  VF+ D
Sbjct: 263 FSRIYCDVVFLT-VPYSTHGWWMGYLAKDDNSH--VFYFD 299


>AL021504-1|CAA16428.3|  325|Caenorhabditis elegans Hypothetical
           protein Y61B8B.1 protein.
          Length = 325

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 162 TAVDNSIEIFNKFLPFDSTDQSITI*IFENLFKIQFHECV 43
           TA D ++  F KFLP+   +   TI  F   F +  H C+
Sbjct: 56  TATDLNLTTFMKFLPYYPINALGTIGYFSQWFNMPTHYCM 95


>AC025726-5|AAY55897.1|  141|Caenorhabditis elegans Hypothetical
           protein Y71G12B.33 protein.
          Length = 141

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +1

Query: 262 CLMGKYHNLLYIAIKLAFDWGLKDNGTVAALLDELY 369
           C+ G   NLL   I + F+W     G +  + D +Y
Sbjct: 94  CIFGSLMNLLVATIAVYFEWQASKYGDLFEVSDNIY 129


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,131,613
Number of Sequences: 27780
Number of extensions: 332614
Number of successful extensions: 882
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)