Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte23f01
         (619 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    24   1.4  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    23   1.8  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   2.4  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    23   2.4  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    23   2.4  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    23   2.4  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    23   2.4  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   3.2  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   9.6  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    21   9.6  

>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +3

Query: 6   QFSKATSFNS*NNSKYHNQNTK 71
           ++S   ++N+ NN+ Y+N N K
Sbjct: 323 KYSNYNNYNNYNNNNYNNYNKK 344


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
 Frame = -2

Query: 333 NYTKRIYHKYFLLFA*KCYSDERLLSVCTSLRSALRFDSARGFVCP--KTLSNYICHSPP 160
           ++TK++ H   L      +SD+++ SV  S   A+R       + P  K +       P 
Sbjct: 298 DHTKQLSHDVLLRAKQIGFSDKQIASVVKSSELAVRIQRQENNIRPMVKQIDTVAAEWPA 357

Query: 159 *FRYIYKAF 133
              Y+Y  +
Sbjct: 358 TTNYLYLTY 366


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 220 FGPRFCMSKDAFKLHLSFAPLI 155
           FGPRFC +  AF +  S A ++
Sbjct: 93  FGPRFCDTWIAFDVMCSTASIL 114


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 15  KATSFNS*NNSKYHNQNTK 71
           K +++N+ NN+ Y+N N K
Sbjct: 90  KYSNYNNYNNNNYNNNNYK 108


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 15  KATSFNS*NNSKYHNQNTK 71
           K +++N+ NN+ Y+N N K
Sbjct: 90  KYSNYNNYNNNNYNNNNYK 108


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 15  KATSFNS*NNSKYHNQNTK 71
           K +++N+ NN+ Y+N N K
Sbjct: 90  KYSNYNNYNNNNYNNNNYK 108


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 15  KATSFNS*NNSKYHNQNTK 71
           K +++N+ NN+ Y+N N K
Sbjct: 90  KYSNYNNYNNNNYNNNNYK 108


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 309 YDKCASYNLRYCPFGRFVKSNNHLVNV 389
           Y   +S+NL Y    +FVKS     NV
Sbjct: 265 YSALSSHNLNYVNTEQFVKSQYQANNV 291


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -3

Query: 527 LERCTPSPSSSLLNTKIDIAA 465
           ++ CT SP+++ L + +  AA
Sbjct: 27  IQACTTSPATASLESSLSAAA 47


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/21 (28%), Positives = 14/21 (66%)
 Frame = -2

Query: 357 NGQRGSILNYTKRIYHKYFLL 295
           N  + +  NY K++Y+K +++
Sbjct: 327 NNYKYNYNNYNKKLYYKNYII 347


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,808
Number of Sequences: 438
Number of extensions: 3611
Number of successful extensions: 21
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)